Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00519 ACCACAACTTCCTACAGACCACATTCCCAGCTGCTTCCTCATCGCCTTCTTCCTTCACAATGTCATCAATGGCGGCGGCTACTTCACCATGCGCCTCCAAATCCTTCTCCAAATCCTCTTCCTCCTTCACCCTTCCTAAACCCTTCTCCAGATTCGATCTTTCAGTTTCTCCTCTTCCCCACAATCCCACTTTCCGCCGCCCTCTTCGCATCTGCACCAGCTCTCTCTCCAATCCTTCCCCTTCCCCTAAACCCTCCTCCACCGCCGCCTCCGCCGCTGCCGTCGAAACTTCCCCCATCGCCACCCCTGATATTTTTGTCTCCCGATTCGCCTCCGATGAACCGAGAAAAGGCGCTGATATCCTCGTCGAGGCTCTCGAGCGCCAAGGCGTCACCAATGTCTTCGCTTACCCCGGAGGCGCCTCCATGGAGATCCATCAGGCCCTCACCCGCTCTTCAATTATCCGTAACGTTCTCCCTCGCCACGAGCAGGGCGGCGTCTTCGCTGCCGAGGGTTACGCTCGCTCCTCTGGCCTTCCCGGCGTTTGCATTGCAACTTCCGGTCCCGGTGCCACTAATCTGGTCAGCGGCCTTGCCGACGCCCTGCTCGATAGCGTTCCATTGGTGGCCATTACAGGGCAAGTTCCGAGGAGAATGATCGGTACCGATGCGTTTCAGGAAACTCCAATTGTTGAGGTAACTCGCTCTATTACAAAGCACAATTATCTGGTTCTTGATGTAGATGACATTCCTAGGATTGTGAGCGAGGCATTTTTCCTCGCAATTTCTGGTCGACCTGGTCCTGTTCTTATTGATATTCCTAAGGACGTTCAGCAGCAGCTCGCGGTTCCTAATTGGAATCAGCCCATGAAATTACCCGGTTACTTGTCTAGGTTACCTAAGCCTCCCATTGATTCTCATTTGGAGCAAATTTTGCGATTGATCTCTGAATCTAAGAAGCCTGTTCTTTACGTGGGTGGAGGGTGTTTGAATTCCTCGGAGGAGCTGCGGCGGTTTGTTAAGCTCACCGGGATTCCGGTGGCCAGTACTCTGATGGGTCTTGGGGCTTATCCTTGCTCCGATGATTTGTCTCTGCAAATGCTGGGAATGCATGGCACAGTTTATGCCAACTACGCTGTGGATAAATCTGACCTGTTGCTTGCATTTGGAGTGAGATTTGATGACCGTGTGACAGGGAAGCTTGAGGCTTTTGCGAGTCGTGCGAAAATCGTTCATATCGATATTGATTCAGCTGAGATTGGAAAGAACAAGCAGCCCCATGTGTCGGTCTGTGGTGATGTGAAGTTGGCCTTACAGGGAATGAATCGATTACTTCAGAAAGCTGAGAAGGTTCACTTTGATTTCTCTCCGTGGAGAGAGGAGCTGAATGAGCAGAAATCAAAGTATCCATTGACTTTCAAAACATTTGATGAGGCCATTCCTCCACAGTATGCAATTCAACTCCTTGATGAGCTAACCAACGGCGAGGCCATCGTAAGCACAGGGGTGGGGCAGCATCAGATGTGGGCAGCTCAGTTCTACAAGTACAAGAAGCCACGCCAGTGGTTAACCTCCGGTGGGTTAGGTGCAATGGGCTTTGGACTGCCTGCAGCCATGGGGGCAGCAGTAGCAAATCCCGATGCGGTGGTCGTAGACATCGACGGGGACGGGAGTTTCATCATGAATGTCCAAGAACTGGCAACGATCAGTGTTGAGAAACTTCCAGTGAAGATCCTTCTGCTGAACAACCAGCATCTAGGCATGGTTGTGCAGTGGGAGGATCGGTTCTACAAAGCCAACAGGGCTCACACTTACCTGGGAAATCCATCAAATGAGTCCGAGATATTCCCCAACATGTTAAAGTTTGCAGAGGCATGCGGGATCCCGGCTGCTCGTGTGACGAAGAGGGCCGAGTTAAGAGCAGCGATGGAGAAGATGCTGAAGACAGAAGGACCTTACTTGTTGGATGTGATTGTACCACATCAGGAACATGTGCTGCCAATGATTCCCAGTGGTGGTGCTTTCAAAGATGTGATCACAGAGGGAGATGGAAGATCCGTATACTAATCTGAATAATAAATCCTTTTTACGCCACCATTTTATGTACATTTTTGTTCCTTCCTTCTCATTTAGTTTGTTTTGTTAGTTTCCGCTTGCTTTATCTCATAAACAATGTTGTAAGAGTTCCAACTCCCTAATTTATGCTTTGTTGTCTCCTAGCTTGCGGTCATTTCATCTCTTATTTCCGTCTACAACACTCGGGACCATGCTTACAGTTTGGAAATGGGAATGAGAAACTGAGAATCATTCCAAAGATTCGTCTGGTTGATTTCTTTTAATTATTCTGTCCTTGTTTTCTTTAGGTAGATCCCACGACCCTTTTTAAGTGGGTCTAGCCGTTTCTTTTCAGGTCTTATACGAACTAAAAGAATATCTTCATTTTAA 2444 48.94 MSSMAAATSPCASKSFSKSSSSFTLPKPFSRFDLSVSPLPHNPTFRRPLRICTSSLSNPSPSPKPSSTAASAAAVETSPIATPDIFVSRFASDEPRKGADILVEALERQGVTNVFAYPGGASMEIHQALTRSSIIRNVLPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRIVSEAFFLAISGRPGPVLIDIPKDVQQQLAVPNWNQPMKLPGYLSRLPKPPIDSHLEQILRLISESKKPVLYVGGGCLNSSEELRRFVKLTGIPVASTLMGLGAYPCSDDLSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCGDVKLALQGMNRLLQKAEKVHFDFSPWREELNEQKSKYPLTFKTFDEAIPPQYAIQLLDELTNGEAIVSTGVGQHQMWAAQFYKYKKPRQWLTSGGLGAMGFGLPAAMGAAVANPDAVVVDIDGDGSFIMNVQELATISVEKLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNESEIFPNMLKFAEACGIPAARVTKRAELRAAMEKMLKTEGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSVY 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9961329 9963772 - XM_039022999.1 Bhi02g00519 27041

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00519 668 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 97 260 IPR012001 GO:0030976
Bhi02g00519 668 CDD TPP_AHAS 460 652 IPR039368 GO:0030976
Bhi02g00519 668 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 97 660 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Bhi02g00519 668 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 91 274 IPR029061 -
Bhi02g00519 668 Gene3D - 288 451 - -
Bhi02g00519 668 SUPERFAMILY DHS-like NAD/FAD-binding domain 286 451 IPR029035 -
Bhi02g00519 668 CDD TPP_PYR_POX_like 100 255 - -
Bhi02g00519 668 MobiDBLite consensus disorder prediction 1 24 - -
Bhi02g00519 668 PANTHER ACETOLACTATE SYNTHASE 68 666 - -
Bhi02g00519 668 MobiDBLite consensus disorder prediction 51 75 - -
Bhi02g00519 668 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 460 660 IPR029061 -
Bhi02g00519 668 Gene3D - 452 638 - -
Bhi02g00519 668 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 482 637 IPR011766 GO:0003824|GO:0030976
Bhi02g00519 668 Gene3D - 85 279 - -
Bhi02g00519 668 ProSitePatterns Thiamine pyrophosphate enzymes signature. 519 538 IPR000399 GO:0000287|GO:0030976
Bhi02g00519 668 Pfam Thiamine pyrophosphate enzyme, central domain 289 419 IPR012000 GO:0000287|GO:0030976
Bhi02g00519 668 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 68 666 IPR045229 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00519 K01652 E2.2.1.6L, ilvB, ilvG, ilvI; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] - csv:101213339 1209.9
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02189 Bhi-Chr1:51809551 Bhi02g00519 Bhi-Chr2:9961329 9.37E-47 dispersed
Bhi02g00519 Bhi-Chr2:9961329 Bhi03g00309 Bhi-Chr3:6803711 2.95E-19 dispersed
Bhi07g01426 Bhi-Chr7:42309052 Bhi02g00519 Bhi-Chr2:9961329 4.35E-08 dispersed
Bhi07g01427 Bhi-Chr7:42311708 Bhi02g00519 Bhi-Chr2:9961329 4.57E-08 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g102 . Blo16g00269 . . . Bpe13g00201 Bma06g00260 . . . Cma10g00060 Cma11g00031 . . . . Cpe04g01617 Bhi02g00519 . . . Hepe09g0046 . . Cla06g01743 Cam06g1933 Cec06g1983 Cco06g1988 Clacu06g1889 Cmu06g1831 Cre06g2646 . . Cone13ag0223 . . . . . . . Bda11g01597 . . . . . . Cmo10g00054 Cmo11g00033 . . . . . Cpe18g00907 . . . . . . . . . . . . . . Lsi06g01643 . Chy02g02664 Cme02g02067
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007549 1 1 1 2 1 1 0 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 1 1 1 1 1 2 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00519 Bhi_Chr02 FPKM 7.05907 6.404532 4.751963 4.320409 13.365549 12.76026 14.219845 3.370696 3.024454 3.554992