Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00523 TGAAGGCTGTTACCTTATCTCAACTCTTTTCGGAGTTCTGCGACTCTCTCACCCTTTTTTCTTCCTTCCATCTTCACCTCTTCAAAAATTTCTTCACATTCCCCAAAATCACTTCCCTATTTCCTCAAATCTTCTCATCAATCCATCAAATCCCCTCCCAGCATTTGGCCAACCCTTACTACTACAATCGCCGCCGTCGCCGGCCGATGGACACCAACAATCAAACCCAATCCTCCCCTTACCCTCCCCCTCAGGCCCCTGTCCCGGCCCCTCCCTTCCACCACCTCCTTCAGCAGCAGCAGCAACAGCTTCAGATGTTCTGGTCCTTTCAGCGTCAAGAAATCGAACAGGTTAACGATTTTAAAAACCATCAGCTTCCTCTCGCCCGCATTAAGAAGATCATGAAAGCCGACGAGGATGTTCGTATGATCTCTGCCGAGGCCCCCATTTTGTTTGCCAAGGCTTGCGAGCTCTTCATTCTTGAACTCACTATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCTGCTGCCATCACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTGCCTAGAGATGAGATCAAGGACGAGGCTGGGTTGGGAGGCATGGTCGGAGCCACTGCTAGCGGAGTGCCGTACTATTACCCGCCTATGGGCCAACCGGCAGGGGCTCCAGGGGGGATGATGATTGGGAGACCGGCAATGGATCCTACCGGAGTTTACGCTCAGCCGCCGTCCCAGGCATGGCAATCGGTGTGGCAGACCGCGGCTGAGGACGGTTCTTACGCGAGTGGGGGCAGTAGCGGGCAGGGTAATCTTGATGGTCAGAGCTAAGCAATTCTTGTGTAGATGATCTGCTGTCTGGTGCAATGAAAAAAACTGATGGGTTTTGCTGATCCTGTCCAGGGCGTAAAATGAAGTGTATTTTTCTTTTATGTTTCCTTTTCGCACGGGGTTAACTTTGGAAACTTGTAAAAACTTTAACTAGATGTCGTCGAATTGACATTACTTTGTTAGCTTGTTTCTACGTTTCTGATATGAATTGGCTTTTATCATTTTGGTTCAAGATCAATTTTACCTTGTT 1119 48.61 MDTNNQTQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGQGNLDGQS 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10022921 10028253 - XM_039023067.1 Bhi02g00523 27045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00523 220 SUPERFAMILY Histone-fold 30 128 IPR009072 GO:0046982
Bhi02g00523 220 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 2 220 - -
Bhi02g00523 220 MobiDBLite consensus disorder prediction 1 23 - -
Bhi02g00523 220 Gene3D Histone, subunit A 24 134 IPR009072 GO:0046982
Bhi02g00523 220 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 2 220 - -
Bhi02g00523 220 Pfam Core histone H2A/H2B/H3/H4 48 119 IPR007125 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00523 Bhi-Chr2:10022921 Bhi02g02028 Bhi-Chr2:55177350 2.62E-69 dispersed
Bhi04g01469 Bhi-Chr4:36657833 Bhi02g00523 Bhi-Chr2:10022921 1.97E-10 dispersed
Bhi07g01165 Bhi-Chr7:36325218 Bhi02g00523 Bhi-Chr2:10022921 1.05E-11 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
389 PF00808 CBFD_NFYB_HMF 2.20E-17 CL0012 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00523 - - csv:101213576 358.607