Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00596 ATGTTTGCAGCAGGTACAGACACAACTTACACAGTATTGGAATGGGCGATGTCAAAATTGTTGAAACATCCAAAAACCATGAAGAAACTGAAGAATGAAATCAGAAAAATAAAAGGTGATCACAAAGGATGTTATGTAAATGAGAATGATTTAGACAAAATGGTTTATTTAAAGGCAATAATCAAAGAGACGTTGCGACTGCACCCACCCATTCCACTTCTCATTCCTAAAGAATCAATCAAACCCATAAATTTAAGAGGGTATGACATCAAACCTAGAACTCGAGTTATAAGCAATGTCGCCCCAAAACTATGGGAAGAAGCAGAGGAGTTTAGGCTAGAAAGGTTTATGAACAATTCAATAGATTTCAAGGGTCAGGATTTCGTGTTGATCCCATTTGGTGTAGGGAGAAGAGGATGTCCTGGGATTGTGTTTGCAACTGTAATTAATGAGATAACTTTAGCAAATTTGGTGCATAAGTTTGATTGGATGGTTTCAAATGGTGAGGTTTTGGACATGACAGGAGCTTTTGGGATGACCATTCATAGGAAGTTTCCACTTGTGGCTACAACAACTCCTTGTTAG 585 37.95 MFAAGTDTTYTVLEWAMSKLLKHPKTMKKLKNEIRKIKGDHKGCYVNENDLDKMVYLKAIIKETLRLHPPIPLLIPKESIKPINLRGYDIKPRTRVISNVAPKLWEEAEEFRLERFMNNSIDFKGQDFVLIPFGVGRRGCPGIVFATVINEITLANLVHKFDWMVSNGEVLDMTGAFGMTIHRKFPLVATTTPC 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11273521 11274105 - XM_039024400.1 Bhi02g00596 27118

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00596 194 PANTHER CYTOCHROME P450 71B11-RELATED 1 192 - -
Bhi02g00596 194 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 PRINTS P450 superfamily signature 59 70 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 PRINTS P450 superfamily signature 131 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 PANTHER CYTOCHROME P450 71A21-RELATED 1 192 - -
Bhi02g00596 194 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 PRINTS E-class P450 group I signature 58 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 PRINTS E-class P450 group I signature 94 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 PRINTS E-class P450 group I signature 130 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 PRINTS E-class P450 group I signature 140 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 Gene3D Cytochrome P450 1 190 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 Pfam Cytochrome P450 1 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 SUPERFAMILY Cytochrome P450 1 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi02g00596 194 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 133 142 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00596 - - - bhj:120071968 393.66
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi02g00596 Bhi08g01673 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00596 Bhi-Chr2:11273521 Bhi08g01677 Bhi-Chr8:47226428 4.17E-62 dispersed
Bhi02g00595 Bhi-Chr2:11210680 Bhi02g00596 Bhi-Chr2:11273521 6.56E-120 tandem
Bhi02g00596 Bhi-Chr2:11273521 Bhi02g00597 Bhi-Chr2:11302544 3.97E-120 tandem
Bhi02g00596 Bhi-Chr2:11273521 Bhi07g01821 Bhi-Chr7:49459744 1.87E-54 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g854 . . . Bda15g00533 . . . . . Cmo18g00168 Cma10g00089 . . . . . Cpe04g01587 Bhi02g00596 . . . . . . . . . . . . . . . . . Lsi02g00427 Csa01g00906 Chy12g01222 Cme12g01648 . . . . . . . . . Cmo10g00091 . . Cma18g00201 . . . . Bhi08g01673 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000106 14 8 5 4 4 8 0 8 5 13 4 7 6 8 6 16 5 16 1 6 10 8 6 12 5 13 10 7 10 3 228
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00596 Bhi_Chr02 FPKM 1.859383 2.638762 6.243928 6.463438 18.474365 17.095591 19.916075 4.257172 4.581341 5.595058