Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00618 GAGAGAAGAGAGAGAGAGAGAGAGAAATGGGGGTTTTAGTTAAGTAAGGTGAGCGTGAAAAGGGGCGGGGGTGGTTGAGAAGTGAGGGAGTGACACATGTTAAGCATCCAATCCAACGCTGCCCGTAGATACCACGACAACCCCACTCCCACGTTTCTATTCTATCGTAATTACTATTCTCTCTTACAACGCCGTTACCCAATCACACGCCGACACCTCCTAACGCCGTCTCTCCTTCCTTCAGTCTATTGTCTTCCCTTCTCTCTCCTCTCTTCCTTCACCCATTTCCGATTCACCCCACTCTTCTCCTCTCAATTCACCCTCTTCCCAGGAAAAAAAAAAAAAAATATATTCCATCCCACTACTGTTTCAGACAGTTGTAGAAAGAAAACCAAAACAAACCAAATCCTAAGTTCAGGCTCCTCTTCAACGTTACACAGATGCAGATGGCCGTATCCCCACCCGCAACCTAGAGTTTCATTCCATCCGATTACCCTTAAAACTATCTCAAGTCTCAATTCCCTTTCCCCTCCTCCATCTCCATGGGGATTTTCTCCTCCTCTTTCCTTGTTACTACCTAGGGTTTTCCAACTTCCTTCTCTTCTTTCCCGCTTTTGTATGACACTTACCAATTCCCTACCTACCTCCGAGATCTGTCATCGAATGGCCTCCTCCGAGGTTTCCATCAACCCCAATTCCGCCTCCTTTAACGACCATGCGGATTCTACCAAAGACACCTCCGATCCACCCAAACCTCTCTCTTCCAGGGATGCTGATATCGCCCTCTACACCGAGCTCTGGAATGCTTGTGCTGGTCCTCTCGTTTCTGTTCCTCGCGAAAACGAGCGCGTTTTCTACTTCCCTCAGGGCCACATCGAACAGGTGGAAGCATCAACTAGTCAAGTGGCGGACCAACAGATGCCTGTTTATAACCTCCCATCCAAGATCCTCTGCCGCGTTATTAATGTGCACTTAAAGGCCGAGCCGGACACCGATGAGGTATTTGCGCAAATAACTTTGCTTCCAGAGGCTAATCAAGATGAGCATGCTGTGGACAAGGAACCCCCACCTCCTCCCCCGCGGAGATTTCATGTGCATTCTTTTTGCAAGACTCTGACTGCCTCTGACACCAGTACTCATGGGGGGTTTTCAGTCTTGAGACGCCATGCTGATGAATGTCTTCCACCACTGGACATGTCACGACAGCCTCCTACCCAGGAGTTGGTTGCAAAGGATTTGCATGGAAATGAATGGCGTTTTCGTCATATATTTCGAGGGCAACCACGAAGGCATTTGCTTCAGAGTGGTTGGAGTGTTTTTGTGAGCTCAAAAAGACTGGTTGCAGGAGATGCTTTTATATTTTTGAGGGGTGAGAATGGAGAACTGCGCGTTGGTGTTAGGCGTGCCATGAGACAACATGGCAATGTTCCATCGTCGGTCATATCTAGCCATAGCATGCATCTTGGTGTGCTTGCAACTGCTTGGCATGCTATTTCCACAGGCACGATGTTCACTGTCTACTATAAGCCTAGGACTAGCCCTTCTGAATTCATTGTTCCATATGACCAATATATGGAGTCTATTAAGAAGAGCTACACCATAGGAATGCGGTTTAAAATGAGATTTGAAGGTGAAGAGGCTCCTGAGCAGAGATTCACCGGTACTATCATTGGATGTGAAGATGCTGATCCCAAAAGGTGGAAAGATTCCAAGTGGAGATGCCTGAAGGTGAGATGGGATGAAACTTCTACTATTTCTCGTCCGGAGAAGGTCTCACCATGGAAAATTGAGCCTGCCCTTGCTCCTCCTGCACTGAATCCCCTTCCTATGACTAGACCTAAACGGCCTCGATCAAACATGGTATCTACATCCCCCGATTCCTCTGTTCTTACACGAGAAGGCTCATCAAGAGTGACTGTAGACCCTTCACCAGCCAGTGCATTTACAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTATTGATGGCAATGATCTGGATGCTGCCGAAAAATCTGTTATGTGGCCTCCTTCACTAGATGATGAGAAAATTGATGTGGTTTCTACGTCTAAGAAACATGGAGCAGATAGCTGGATACCTCCAGGAAGGAGTGAGCCAACCTATGCAGATCTTCTGTCAGGTTTTGGAACTAATATTGATTCATCTCATGGTGTTCGAGCTGGCATGGGAGATCCAGCGGTAGTCACTGCTAATTCAATCAGAAAGCATGCCATGGATCAAGATGGAAAGTTTAACTTCCTTGGTGGTAGCTCATGGTCTGTCTTGCCTTCTGGTCTCTCGCTCAACCTGGTCGACTCTTGTCAGAAGGGTCATATTCAGGCTGGTGACTTATCTTATCAAGTGAGAGGAAATGCTACCTTCAATGGTTTTGGTGATCATTCCATGGCCCATTGTCATAGAACAGAACAGCCTCACGGAAACTGGTTGATGCCTCCACCTTCATCTCATTTTGACTATTCAGTTCATTCAACTGAACTGATGTCAAAACCTATGTTATTTCAGAATCAAGATATACTGAAACCCAAAGATGGGAATTGTAAGCTTTTTGGCATTTCTCTCATTAAAAATCCCGCTATTCCAGACCCTGTAGGATTGAATAGAAATACGATGAACGAGGCAGATGTTATGCATCCTAATGTACATCAAATCCATCCAAACGAGTCTGGCCTGAAGTCTGAACTATCTGGGGGTTCAAAGTTTGCTGATAAATCTCTTGCCATCAATGAGGCCGATAAGTTGCAGCAAACATGCAAATCACAGTGTACTTCAGCGAGGAGTTGTACAAAGGTTCACAAGCAGGGGATTGCACTAGGAAGGTCAGTTGATCTTAGCAGGTTCAACAAATACGATGAATTGGTTGCTGAATTGGACCAACTGTTTGAATTTGGTGGTGAGCTGCTGGCTCCCAAAAAGAACTGGCTTATTGTATATACGGATGATGAAGGTGATATGATGCTTGTTGGAGACGATCCCTGGCAGGAGTTTTGTGGTATGGTTCGGAAGATTTTTATCTATACAAGAGAAGAAGTCCAGAAGATGAATCCAGGATCCCTAAATTTAAAAGGCGATGAGAATCCATCCGTTGAAGGGGAAGAAGCTAAAGAGATCAAAAGCCAGGCGGTACCTTCGATGTCAGCACCCGAGAGTTCTTAGGTTTTTGCTTTGTGGGGTATAGGTTTTTGGTGCGGTACGGAAGGAGTTGAGCAGAGTAATGCAGCGAGGCCGGAAGGTTGCGGCCTTATGTAAAAGGTAGATGGTAGAAATGATGTATTGGAATTTTGAACATGTGCAAGTTAGTATTGTGGAGTGTAGTCCACTGTTATACGTAAAAATATGTATATGCCCGCGTGTCTACGGATGATGGCTGGGCTGGCTTGAGTTTCCAAACCATAATTCCACCTTGTATATAGGCTCTTGTTGTAACTCAAGAAATGTAGTGAATCTAAATTCAGTTGGGTGCGTTTACTAGTTGGGTTGGTCAGGCGGACTCTGCAATAAAACGCCGCCACGAGATGAATGATCGATTTACATCTAGAAATGTTTGCTGCCTTTTATGTGATGCCCAAGGGCAAGGCAGAAGAAGAGAACACGCTCACACCAGTGGAAATGTGTTTCAAAGAGGGCTGAGACCAAAATGGGATTGCAATTAAAACTTGAGGTCGTGTAGTGGCCACGACAGCAATGAACATGAAGCTACTACTGCTTCTGGATTCCGCTTCAATAATCCAAACCAAACTATTTCCCTA 3779 45.65 MLSIQSNAARRYHDNPTPTFLFYRNYYSLLQRRYPITRRHLLTPSLLPSVYCLPFSLLSSFTHFRFTPLFSSQFTLFPGKKKKNIFHPTTVSDSCRKKTKTNQILSSGSSSTLHRCRWPYPHPQPRVSFHPITLKTISSLNSLSPPPSPWGFSPPLSLLLPRVFQLPSLLSRFCMTLTNSLPTSEICHRMASSEVSINPNSASFNDHADSTKDTSDPPKPLSSRDADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPRSNMVSTSPDSSVLTREGSSRVTVDPSPASAFTRVLQGQEFSTLRGNFIDGNDLDAAEKSVMWPPSLDDEKIDVVSTSKKHGADSWIPPGRSEPTYADLLSGFGTNIDSSHGVRAGMGDPAVVTANSIRKHAMDQDGKFNFLGGSSWSVLPSGLSLNLVDSCQKGHIQAGDLSYQVRGNATFNGFGDHSMAHCHRTEQPHGNWLMPPPSSHFDYSVHSTELMSKPMLFQNQDILKPKDGNCKLFGISLIKNPAIPDPVGLNRNTMNEADVMHPNVHQIHPNESGLKSELSGGSKFADKSLAINEADKLQQTCKSQCTSARSCTKVHKQGIALGRSVDLSRFNKYDELVAELDQLFEFGGELLAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTREEVQKMNPGSLNLKGDENPSVEGEEAKEIKSQAVPSMSAPESS 1029
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12034365 12039950 + XM_039022744.1 Bhi02g00618 27140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00618 1029 SUPERFAMILY CAD & PB1 domains 903 981 - -
Bhi02g00618 1029 ProSiteProfiles PB1 domain profile. 904 988 IPR000270 GO:0005515
Bhi02g00618 1029 MobiDBLite consensus disorder prediction 570 610 - -
Bhi02g00618 1029 Pfam Auxin response factor 462 544 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi02g00618 1029 Pfam AUX/IAA family 949 989 IPR033389 -
Bhi02g00618 1029 Pfam B3 DNA binding domain 336 437 IPR003340 GO:0003677
Bhi02g00618 1029 MobiDBLite consensus disorder prediction 584 610 - -
Bhi02g00618 1029 PANTHER AUXIN RESPONSE FACTOR 2 216 1011 - -
Bhi02g00618 1029 SUPERFAMILY DNA-binding pseudobarrel domain 333 465 IPR015300 -
Bhi02g00618 1029 SMART B3_2 336 438 IPR003340 GO:0003677
Bhi02g00618 1029 Gene3D - 333 438 IPR015300 -
Bhi02g00618 1029 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 216 1011 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi02g00618 1029 CDD B3_DNA 334 436 IPR003340 GO:0003677
Bhi02g00618 1029 Gene3D - 499 569 - -
Bhi02g00618 1029 MobiDBLite consensus disorder prediction 198 223 - -
Bhi02g00618 1029 ProSiteProfiles B3 DNA-binding domain profile. 336 438 IPR003340 GO:0003677
Bhi02g00618 1029 Gene3D - 899 993 - -
Bhi02g00618 1029 MobiDBLite consensus disorder prediction 993 1029 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00618 Bhi-Chr2:12034365 Bhi09g01446 Bhi-Chr9:36642402 6.08E-28 dispersed
Bhi09g02108 Bhi-Chr9:59941699 Bhi02g00618 Bhi-Chr2:12034365 6.38E-17 dispersed
Bhi09g02109 Bhi-Chr9:59941702 Bhi02g00618 Bhi-Chr2:12034365 6.54E-17 dispersed
Bhi10g00540 Bhi-Chr10:11941997 Bhi02g00618 Bhi-Chr2:12034365 4.66E-74 dispersed
Bhi10g00541 Bhi-Chr10:11942210 Bhi02g00618 Bhi-Chr2:12034365 4.66E-74 dispersed
Bhi02g00618 Bhi-Chr2:12034365 Bhi08g02023 Bhi-Chr8:58272146 4.42E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
397 PF02362 B3 4.40E-21 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00618 - - bhj:120070853 2064.66