Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00627 CATTTTCGAAAAATACAATCTTTTATGTTTTGGGTGTCACAAAATGGATTACTTCTATTCTATATCAGGCCTGCCAAGTATGATGGCGATTTAAATATAAGATTGCCTGCTATGTGTATTTCTCCACTAAGCACAAGCAGCCGCAGCACTTTGTATAGGTCCTTGCCTTAGTTGTCTCTCACTGCCTAAACCATGCTTTCTTCAACAAGGAAGACCATGGCAATGGCTGCTCTTATTTTTCATCTTTTCATTCACAAGGAGGTCGACTCCTTTCATGCTCATTCTGACAAGATTATTAGTCTTCCAGGGCAGCCCCCTGTGGAGTTTCATCAGTTTTCAGGTTATATTCATGTAGATGACCAAAAGCACAGAGCACTGTTTTACTACTTCGTTGAAGCAGAAATTGACCCTGCTTCCAAGCCTTTGGTTCTCTGGCTGAATGGAGGGCCTGGTTGTTCTTCCCTAGGAGTTGGGGCATTCTCAGAAAATGGACCATTTAGGCCAAACGGGGAGGTTTTAGAGAAAAATGAATATAGCTGGAACCGAGCAAACATGCTGTACTTAGAGACGCCCGCAGGAGTTGGGTTCTCTTATGCTAATGGTACCGCTTCTCATGGGGCAATGGATGATAAAGCCACAGCAAAAGACAATCTCATATTCTTGCAAAGGTGGTTCAATCAGTTCCCTCATTACAAGCATAGAGATCTATTTCTAACAGGGGAAAGCTATGCAGTTATACCAGGTCATTACATTCCTCAGCTGGCAAGGCTTATGACTGAATTGGACAGGAAGGAGAAGTTATTTAATCTGAAGGGAATTGCACTAGGGAATCCGGTTTTAGAGTATGCGACAGACTTCAATTCAAGGGCAGAATTCTTTTGGTCACATGGATTAATATCAGACTCCACTTACAGATTGTTCACTGCTGCTTGTAACTATTCCCGATATGTTAGTGAGTACTACAGAGACTCAGTCTCGGGGGTTTGTTTGCACGTGATGACCCAAGTCAACAGAGAAACCAGTAAATTCGTGGACAAATATGACGTTACTCTTGATGTCTGTATTCCTTCAGTGCTCTCGCAGATTAAGTATTTAAGCCCACAGCATGTGCGAGAGAGGATAGATGTTTGCATTGAAGATGAAACTGTTAAATATCTGAACCGAGAGGATGTGAGAAAGGCTCTTCATGCCCGTCTTGTCGGAGTGCACAAGTGGGCTGTTTGCAGCGAAGTTCTGGACTATGAGCTTCTCAACCTGGAAATTCCAACCATCTCCATTGTTGGGTCACTTGTCAAAGCGGGCATACGAATCTTGATTTACAGTGGAGATCAGGATTCGGTAATTCCATTGATGGGTAGTCGCTTGCTGGTTCATAGGTTGGCAACAGAGCTGGGTCTTAACACTAGTGTTCCATACGGTGCCTGGTTCCAGGGAAAGCAGGTAAGTCTGCTATTTGTCCTCATTTCGAATTCCACAATTCAATTGAGCATTTTTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCAGGTCGCAGGTTGGACCCAAGTTTATGGCAATATCCTTTCGTTTGCAACCATTCGAGGTGCCTCTCATGAAGCTCCATTCTCTCAACCTCAACGGTCACTTATACTATTCAAGTCGTTTCTGGATAACAGGCCTCCACCACATGTTCTGTGATGCAGATTTAATGTATAAGTGAAAACCTCATACATGCTTGGCAATGAAAAACTACCAATTTGCAATTCACTACTTACTCTTTAACTCTGATTCCTCTACATAAAATGTTGACAATGTGCTAAATTAACTGATACTTGGAAGCTACAATATCCAAATCGCATAAGGTCAAAAGTTCACTCCTCGGATGCCTCGCTAACCAAGTAACCATCCTTAAAAGCACATTTCCTGGTTCTCCACCTTCAACAGTTTTACATAACCTCCTACATTCAGTACAACTGTTGAGGGCAGTCTGTCACGCCCCACAAAAAGTCCCTAAAATTTTCACAAAAAGTTTCCTAGCATCAATCAAGGGGAGCCTTGGAGCCCTGTAAAGTCCAAAAGGAGGCAGGCTTTGACACGCACGCGCCCAATGCCAAGCGTGCACCCCAGTCGCCTCGCACGTGGGTCCCAAGCACGCACGCCTCTGCTGGACGCCATCCACACGGCCCTATCAATGTGCACACGTGGCCATGTGCACATGTTCACCCGATGCTCAGCAAATGTCCTAGACGTCTCGCCCATATCCTAGGCGAGCCTGGAAGCTTCTAGAGAACGCTGGACAGTACCAGTGCCCACACCAAGAGCCCAGACGGCCCGAGACAGGCCTGGAAGACCATAGATGGAGCTAGGGCACGTGAGAAGGGTCTAGACAGTGCTAGCGATCACTAGACAGACCCAGACACGTCTGGAAAGCTCTAGATAGACCCAGACACCTCTAGAAGACTCTAGAACGTGTTGGATGAGTCTGGACAAGGCAGTGATGGTCAAGGATGGGAAGATGCTGAAAGAGTCCGAAAATGTTTAGAACACTCTAAAAGGCCTAGTATGTACTTAGATGCTTGTAAAAAGGCTTAGTATGGCCCAAGACATGTCAAAAGGGCTCTAGAAAGAGCCACAACTAACCTCCCTATGTCGGTTTAAGGCCCTAGGTCAATGAGGGCACCCTTATAAATAGCCCATTTGTACAATCATCGGTTGTAAGCTCAAGCAATACAACATCCATTCTTCCAAACTCTCGTGCCTACTCTTTCCTTGTCCTTTACAATTTTTCTCGTGCCATAGCATAATTAAAACCTCTTTAAGGCTTACTTGGAGTGTCTTAGCTACTGAGTTCACCCAAGTGCAGCACGATTGGTTGTTGCAAACAATAACCACGTGACAGGTGGTATCAGAGCAACAGTTTTGAGACCTAGGTACCTCTTCACACCCTTGTTGCGCATGTGGCAACTAAGGAATCACCAATTGAACACGTCATCGAGAGCCCCATCACTCGAGGACGTAAGGAACATCACTCCTCAACCAAGTGCTCAAAATCAAAAGGTCCGACAATAAGAGAGCACGGTGATGCTTGCCTTACCAACCTTGAGCAAGGTTTGAAAGATGTTTAGCTCACTGTTGGTAGGCTAAGCGACAATTATGATGGGTTAGTCCAAGAGAATGCTAAGAACACCTCGGCAGCCCAAGATATGATCGAGGAGCTTGGACAAACATTCAAGAGGGAGATCAGCGCCCTAACAACCAAGGTGGCTGACTTTCGAAAGTTCGTCGAAGGTAAGATCAACAAACTTTACACTGAAATAAATAATGTTCGAGCCGAATATAGGGCACCTTGAAATGCTAGTGGCCTAACCTCCACTAGCAATACTCCCGCTGCATCCAGTGCATCCGGCCTTAAGGTGCCCAAGTCGGACACCTATAATGGCACTCCTAATGCCGCGATGGTAAAAAATTTCTTGCGTGGGCTCGAGCAATACTTTGAAGTTCTAGGGGTGTTTGATGATAATGCACGAATAAGCAACGCACCGACGTTCCTATGTGATGCTGCCCAATTATGGTGGCGAAGGAAACATGCTGAACATGAATGAGGGTTATGTAATATCAGTACGTGGGAACAATTCAAAATGGAGCTTTGAAAGCACTTTGTCCCTCATAATGCCGATGTGGAGGTACGGGGCAAATCGAGACGACTAAGGCACACCGGTAGCATCCTTGACTATGTCAAGGAGTTTACCACCCTCATGCTTGAGATAGACGATCTTTCTGAAAAGGATGCCCTCATCCACTTTAACGATGGCTTGAAGGATTGGGCTAGGGTAGAGCTGGATAGGAGAAATGTCCAGACACTTGACGATACTATTGCTAAGTGCTTGTTGATTACTCCTCTCAAAGCAATGGGAAGAATCCTAGTCCAAGTAAAAGTGAGGGAAACAAGGCACACCAACGAAAAGATCATCACAAGAAGGATGGGGAGAGCTCAAAGGCCTTCCACAAGCATAAGAAGCCCCACAATGGGAATAAAGGTCGGTCCTCTAAACCTCCTAAACCATGCTTTATTTGTGATGGGCCCCATCGAACAAGAGATTGTCCAAATCGAAAAGCTATGAATGCCCTCGTGGCTAAGCTTAACAAAAGAAATTAAGATGCGAGGGAGTCTGAAGCCATAATGGGGTCGCTCCAACAACTGGCTACCCTTCCAAAGAGCCTTTCCTAAAACGAAGGAAAAGATAGTGGTCTACTCTATGCCGATGCATCATTGAATTAGAAGGCTGTGACGAACATGCTCGATACTGGTGCCACACATAATTTCATGGATGAACAAGAGACTTGGCCTGAGCTTCAAAAAAGAACATGGAACCATCAAGACTGTCAACTCGGGAGCCAAGCCTATAAGGGGCATAGCCAAGAACGTCCTAGCCAAGGTCGGTGACTAGCAAGGTACGCTAGACTTTACTGTTGTGCCCATGGATGACTTCAAAATAGTCCTTGGTCTAGCATTCTTTCATAGTGCCTTGGCCTTTCCTATTCCTTTCTCGAAGTCCCTGGTAATATTAGATGAACATATGTTCCGAGTGGTCCCCTTGAGGAGTAAGGAGAGATCCGCCAATATGATCTTTGGCTTACAATTCAAAAGAGGGATCTCAAAGAGTCAAAACTACATGATAGCTTCGGCAAGGGACCTTCGAGATGAGGAAGAAGAAAGCCCGAGCCAACCTCCTGTGTCGACATGCATATAAGAAGTCCTTGATGAATACAAGGATGTAATGCCCACCGAGCTGCCCAAGAAATTGCCACAAGACATGAGGTAAACCACGAGATAGAGTTGGAGCCAGGCACAAGGCCTCCAGCCATGGACCCCTATTGCATGGCCCCACCAGAGCTTGAGGAGTTGAAGAAACAGTTAAAAGATTTACTTGATGCAGGTTATATTCAACCCTCAAAAGCACCCTATGGTGCCCCGGTGCTCTTTCAAAAGAAGAAAGATGGTTCCTATGTATCGATTATAGGCACTCAACAAGATCACTGTCAAGAACAAATACCCAATACCCTTGATAGTAGATCTCTTTGACCAACTTGATAAGGCTCGGTACTTCAGCAAGATAGACCTACGGTCAAGATACTACCAGGTGAAGATCAAAGTGGGAGACGAAGCCAAGACCACGTGCATGACACGGTACGATGCCTATGAGTTCCTAGTCATGCCATTTGGTCTGATCAATGCGCCAGCCACCTTCTGCACACTTATGAACAAGTTGTTCCACCCATTCTTAGATCGCTTCGTGGTGGTTTACTTGGATGATATTGTGATGTACAGTCAAACCCTTGAGGAACATGTGCAGCACCTGAAACAGGTCTTCCATGTACTCCGCGACAACAAGCTATACATCAATAGGGAAAAATGTCCATTTGCTCAGCTGGGGGTGGAATTTCTTGGACATTGGATAAAAGATGGGAAGCTGATGATGGACATAGCCAAGGTACGTGCCATACAAGAATGGAAACCTCCTACTAAGATACCTGAGTTGCATTCCTTTTTGGGCTTTGTAAATTACTATAGACGGTTCATCAAGGGTTATTCGATCATAACTGCCCCCCCTTACCAATCTGTTGAAAAAGAATCAACCTTGGGATCAGTCAAGAAGAGTGCCAAAAAGTCTCTGAATACCTCAGAGAAGCTGTTTCATAGGAACTAGTCATGATACTTCCAGACTACTCCAAACCCTTTGAGGTGCATACTGATGCATCTGACTATGCCATTGGTGTCGTATTAATGCAAGAAGGGCACTTAGTTGCATATGAAAGTCACAAGCTGAATGAGATAGAGCGGCGCTATACTGTCCAAGAGAAAGAGATGACGTCCAAGAGAAGGAGATGACGGCTATCATTCATTGCTTGTGAACTTGGAGGCACTATCTACTTGGATGTCAATTCACTGTGTTGACCGATAACATTGCCACAAGGCACAAGCTACTTTCAAATACAAAAGAAATTGACACCAAAACGGGCTCGATGGTAAGACTTCTTGGCAGAATTTGACTACAAGCTTAAGTATAAACTAGGACGGGCCAACGTAGTAGCTGATGCACTCAGCTGTAAAGCTGAGCTTGCTCCTCTTACCAGCATGCCCACAACCAACTTCCTTGATAGAATCAAGGAAGGGATGGATCGAGATGCCATGGCTAAAAGCCTACTCAGACTGCTGTAGTAATGGAGTTTGAAAAGAAGATTGATGAAATATTGGTAGATCGGAAGATAAGAAAGAGAGGAGTCCCAAGTTAGACATAATACTTGGTGAAATGGCAGGGCTTGCCAGAGAGCGAAGCTAGCTGGGAACGAGAAGACTTGTTGTGGCAATTCGAGGATGACATCAGGAGATATCGGGAGAATAGTGCAATGGGAACATTGCGAAATTAAGTGGGGGAAGGTGTCACGCCCCGCAAGAAGTCCCTAAAATTTTCACAAAAAGCTCCCTAGCATTAGCCAAGGGGGAGCCTTGGGGCACCGTAAAGTCCAAGAGGAACGCAGGCTTTGACACGCACGCATGCCATGCCAGGTGCGCACCCCAGTCGCCTCGTGCAGAGGTCCCTGCACGTGTGGCCCTATCAATGGCGCGCGCGTTCGCTCGATGCTCAGCGAATGTCCTAGACGTCTCGCCATGTCCTAGGCAAGCCTAGAAGCTTCTAGAGAACGTTGGACAGTACCAGCGCCCATGCCAAGCACCCAGACGGCCTGAGACAAGCCTGGAAGGCCATAGATGGAGCTGGTGCACGCGAGAAGGGTCTAGACAGAGCTAGCGATCGTTAGACAGACCCGGACACGTCTAGAAAGCTCTAGACAGACCCGAACACCTATGGAAGAGTCTAGAACATGTTGGATGAGTCTGGACAAGGCAGTGACGGTCAAGGATGGGAAGGTGCTGGGAGAGTCCGAAAATGTCTGGAACACTCTAAAAGGCCCTAATATGTACTTAGATGCTTGTAGAAAGGCTTAGTATGGCCCAAGAAATGTCGAGAAGGCTCTAGAAAGAGCCACAACCGAGCTCCCTAGGTCGGTGGGGAGGCCCCATTTGTACAATCATCGATTGTAAGCTCAAGCAATATAACATCCATTCTCCCAAACTCTCGTGCCTACTCTTTCCTTGTCCCTTTCAATTTCTCTCGTGCCATAGCATAATTAAAACCTCTTTTAGGCTTACTTGGAGTGTCTTAGCTACTGAGTTCACCCAAATGCCACACGATTGGTTGTTGCAAACAATAACCACGTGACAGGTCGCTTAGAAATGTGTCTAACACTTATGGCTGAATAACCGAACCTAAAAGCACATCAGTCCATGAAAGAACTAGTTAAACAAAATCTTCCAAAATATAACCATCCCAAAGTCAGTCTACCCCAAAGCCACATCCAGAGGTCCATAAATTAGGTAAGGCACACGGCTATTACACTGGGTGCAAAGAAGCATAATCAATAAATAATTGAATATATATATATATCATATAATATTGCAAAGCTTAAACAAATGATGCTAAGCCCCGGTCATTGATAGTGGATAGTGGATGGAAAAAATACATATAATATTTAAATCAATATAAAACAGCCTCGTGAAGAAAATGAGCTAACAAATGATGCTAAGCCCCGGTCATTGAGCAAGCCACTCGATCTAGAAGACGCTATTCAGGTACAAG 7678 45.45 MLSSTRKTMAMAALIFHLFIHKEVDSFHAHSDKIISLPGQPPVEFHQFSGYIHVDDQKHRALFYYFVEAEIDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLEKNEYSWNRANMLYLETPAGVGFSYANGTASHGAMDDKATAKDNLIFLQRWFNQFPHYKHRDLFLTGESYAVIPGHYIPQLARLMTELDRKEKLFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYRLFTAACNYSRYVSEYYRDSVSGVCLHVMTQVNRETSKFVDKYDVTLDVCIPSVLSQIKYLSPQHVRERIDVCIEDETVKYLNREDVRKALHARLVGVHKWAVCSEVLDYELLNLEIPTISIVGSLVKAGIRILIYSGDQDSVIPLMGSRLLVHRLATELGLNTSVPYGAWFQGKQVSLLFVLISNSTIQLSIFLSLSLSLSLSLRSQVGPKFMAISFRLQPFEVPLMKLHSLNLNGHLYYSSRFWITGLHHMFCDADLMYK 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12177976 12186519 - XM_039024780.1 Bhi02g00627 27149

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00627 502 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Bhi02g00627 502 Gene3D - 360 433 - -
Bhi02g00627 502 Gene3D - 313 349 - -
Bhi02g00627 502 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 45 23 418 - -
Bhi02g00627 502 SUPERFAMILY alpha/beta-Hydrolases 35 413 IPR029058 -
Bhi02g00627 502 Pfam Serine carboxypeptidase 38 413 IPR001563 GO:0004185|GO:0006508
Bhi02g00627 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 418 IPR001563 GO:0004185|GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00627 K16297 SCPL-II; serine carboxypeptidase-like clade II [EC:3.4.16.-] - pop:7484878 650.973
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00627 Bhi-Chr2:12177976 Bhi02g00629 Bhi-Chr2:12177976 0 dispersed
Bhi02g00627 Bhi-Chr2:12177976 Bhi02g00628 Bhi-Chr2:12177976 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g33 . . . . . . . . . . Cma10g00024 . Car10g00016 . . . . Bhi02g00627 . . . . . . Cla06g01779 Cam06g1972 Cec06g2023 Cco06g2030 Clacu06g1930 Cmu06g1870 Cre06g2683 . . Cone13ag0254 . . . . . . . . . . . . . . Cmo10g00021 . . . . . . Cpe18g00936 . . . . . . . . . . . . . . Lsi06g01676 Csa01g00015 Chy02g02698 Cme02g02105
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000392 2 9 3 2 3 4 5 4 4 5 3 3 4 5 5 3 4 4 3 4 5 5 3 5 6 4 2 6 3 8 126
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00627 Bhi_Chr02 FPKM 1.17386 1.046767 1.249832 1.139031 2.391184 2.50421 2.211593 2.540313 1.966566 2.232441