Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00636 CTGGAAATATTATATATATTTTTTATTATGAATAATTCCCAATTCCTGCCCTCTGAACTTGACTCCCTTGTTCTCTCAAAAATGAATAATGCGGCATGTAGCTGGGAATTAGAAGAGACGCCACAAACCCCCCACTATGACCACCTTCTTCCACCTCAAATCCAATCTGTTTATACTAATAATACTACCACTCACTCCCCAAACGCTTCCTCAAATTATCACATAAATATGCCTTCTTCTCACTCCTACCCTCCTTCCGAGGATCCAACTAATGAAAGTGGAAATGGGGGCGACCGCAAGAGCAGATGCTACAAGCGCGCAAAAGCAGGAGGAGGATCAGGCTGCAAGAAGCTCAAACCCCAACACCATCACCATCATCCCCCTGCTGACGACCATCACCATGGCTACATCCACGTGAGAGCAAGGAGGGGCCAGGCCACAGACAGTCACAGCCTTGCAGAGAGGCTCAGAAGACAGAAAATCAGCCAAAGGATGAAGGTTTTGCAAACGCTTGTTCCAGGCTGCCACAAGGTAACTGGGAAGGCCCTAATGCTCGACGAAATTATTAACTATGTTCAGTCCCTCCAAAATCAAGTTGAGTTCCTGTCCATGAAGCTTGCTTCTGTAAACCCCATTCAATACGACTTTGGAACGGATTGTCCACAAGTCTTCATCGGTAGACCAGCCTCTGAGATATTGAATGCGAATGGCATCGCGTCACGGTCAGATCAGCAGGCAGAATTGGCATATAATATAGCACCATACAACACATTTCAGGCCACAGGAGGCGGCGGCGATGGCAGCTCGATCTTGACGCCCGGAAACATCAGCTTTATCAATACATCTCCGCTTTTCTTGGACCATGGGAATACTTCTCTGCTACATCTGTCATGATCTCCTAATTTACACACAAAACAGAAAGAGAAACAGTTCATAATTAAATTTGAGTTGGAGAGATCAGTGGATGGTTCTATTAACTACTGAACTCTCTTCTATATATTCATACTCGATATGTCCCATTAATTAATTATTGTGAATATGTGTAAGTCCTATCACTCCGTGAGTCAGTGGGTACAACTCTGCAATAGTAAGCCAACTTTTGTGGAGTTAGGGAAAAGTATTGTTGTGGGACCAGTCTTTGTTTGGATTCAATCATATGAGTCGCTTTAGCAACAATTTCTTCTCTTAAATTGGCTAGTCACGTCTTGTCGATAACTAATAGAAAATTAAGGATCCATATAGTATATGCAATATCTGGATTATGAATTAATCTCACAAGCACATGTATTGTG 1292 43.03 MNNSQFLPSELDSLVLSKMNNAACSWELEETPQTPHYDHLLPPQIQSVYTNNTTTHSPNASSNYHINMPSSHSYPPSEDPTNESGNGGDRKSRCYKRAKAGGGSGCKKLKPQHHHHHPPADDHHHGYIHVRARRGQATDSHSLAERLRRQKISQRMKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPIQYDFGTDCPQVFIGRPASEILNANGIASRSDQQAELAYNIAPYNTFQATGGGGDGSSILTPGNISFINTSPLFLDHGNTSLLHLS 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12346843 12348677 - XM_039023096.1 Bhi02g00636 27158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00636 288 SMART finulus 142 192 IPR011598 GO:0046983
Bhi02g00636 288 MobiDBLite consensus disorder prediction 49 83 - -
Bhi02g00636 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 202 IPR036638 GO:0046983
Bhi02g00636 288 PANTHER BHLH-TRANSCRIPTION FACTOR 68 210 - -
Bhi02g00636 288 CDD bHLH_AtBPE_like 126 210 - -
Bhi02g00636 288 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 68 210 IPR024097 GO:0006355
Bhi02g00636 288 MobiDBLite consensus disorder prediction 49 125 - -
Bhi02g00636 288 Gene3D - 133 203 IPR036638 GO:0046983
Bhi02g00636 288 Pfam Helix-loop-helix DNA-binding domain 140 187 IPR011598 GO:0046983
Bhi02g00636 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 186 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00636 Bhi08g01535 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00636 Bhi-Chr2:12346843 Bhi08g01535 Bhi-Chr8:44068362 1.52E-46 dispersed
Bhi02g00636 Bhi-Chr2:12346843 Bhi09g03191 Bhi-Chr9:81814217 5.17E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
398 PF00010 HLH 5.60E-07 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00636 - - csv:101208544 344.739