Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00700 ACTTCCATAATCCGCAGAAGAAGAAAGAAAATCTTCCTCTCCGTCGAAGCAATAATCGGACAACACCGCCGTCCGCCGTCCGCCGTCCGCCGTCCGCCGGGATATGGATTGTATCGGAGAGGATTATTATAATTCCTTAGGGACTGACATCTTCATAGCAACAGAAGAGCCTGGCAGTTGGGGATTCGACGAGCCGGTTTCCGGCTATTATGATTCGAGTTCGCCGGACCCGTCGTCGTCGGCTTCGAAGAACACAGTATCGGAAAGGAATAGGAGAAAGAAGCTCAACGAGAGGCTTTTTGCACTCCGATCGGTTGTTCCCAATATAACTAAGATGGATAAGGCTTCAATTATAAAAGATGCTATCGATTATATCCAAGAATTGCATGACCAAGAGAGGAGGATTCAAGCTGAAATTTATGAGCTCGAAACAGGAAAGTTGAAGAAGATAACAGGTTATGAATTTGACCAGGATCAGCTTCCCTTGCTGCTCAGATCAAAGAGGAAGAAAACTGATCCTTACTTCAGCTTTGATTCTCCTGCTTCAAGAATTTCCCCCGTTGAAGTCCTGGATCTTAGTGTAACATACATGGGGGACAGAACAATAGTAGTGAGCATGACCTGCTGCAAAAGAGCAGATTCAATGGTTAAACTCTGTGAAGTTTTTGAATCACTGAAGCTCAAGATCATCACTGCCAATATTACTGCCGTCTCTGGAAGGCTTTTGAAAACTGTCTTCATTGAGGCTGAGCAAGAGGAGAGAGATTACTTGAAGATTAAAATAGAAACAGCCATTGCAGGTCTTAATGACCCACATAGCCCCATGAGTATCTGAGCCCACAAATGGAAAACACACACGAGAGATTATCTCTCGGCCTTTTTAGCTGTCAACGGCTGGAAACTAGTTCTCTTTCCCTGATCAGAGTTTTCCATTTTGCTCTTTCTTGGGGTTTTCATGTCACAAATTGTTTTCCTGTTGAGAGAGTTCTCCTTTCAGGGGTTCCGATAATTCGTTTCTTGGTCCAAGAAGATATCAGATGTAGGAATGTATTTACATAATAATTAGTTTGAGTGTTTACATGATAATGTTTTCCCTTTGACGTGCTTGAGTGTCTAAATGCCCGGCACATCATCAAGATTGCAATATCCAATTTCTTGACAGTTTTATCAAAAAGAAAAAAAAAAATTAGTCAACTTTGCCTATTCGACCAA 1212 42.33 MDCIGEDYYNSLGTDIFIATEEPGSWGFDEPVSGYYDSSSPDPSSSASKNTVSERNRRKKLNERLFALRSVVPNITKMDKASIIKDAIDYIQELHDQERRIQAEIYELETGKLKKITGYEFDQDQLPLLLRSKRKKTDPYFSFDSPASRISPVEVLDLSVTYMGDRTIVVSMTCCKRADSMVKLCEVFESLKLKIITANITAVSGRLLKTVFIEAEQEERDYLKIKIETAIAGLNDPHSPMSI 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14199219 14204739 + XM_039022800.1 Bhi02g00700 27222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00700 243 MobiDBLite consensus disorder prediction 30 56 - -
Bhi02g00700 243 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 237 - -
Bhi02g00700 243 MobiDBLite consensus disorder prediction 37 51 - -
Bhi02g00700 243 SMART finulus 51 100 IPR011598 GO:0046983
Bhi02g00700 243 Gene3D - 40 110 IPR036638 GO:0046983
Bhi02g00700 243 PANTHER TRANSCRIPTION FACTOR BHLH35 1 237 - -
Bhi02g00700 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Bhi02g00700 243 Pfam Helix-loop-helix DNA-binding domain 50 94 IPR011598 GO:0046983
Bhi02g00700 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 109 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00700 Bhi-Chr2:14199219 Bhi02g00702 Bhi-Chr2:14199344 2.89E-159 dispersed
Bhi02g00700 Bhi-Chr2:14199219 Bhi02g00701 Bhi-Chr2:14199344 5.51E-159 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
406 PF00010 HLH 2.70E-12 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00700 - - cmo:103494233 401.749