Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00701 GATGAAATTATAATTTTTTTTATTTTTATTTTCTTTAGAAGAAGAAAGAAAATCTTCCTCTCCGTCGAAGCAATAATCGGACAACACCGCCGTCCGCCGTCCGCCGTCCGCCGTCCGCCGGGATATGGATTGTATCGGAGAGGATTATTATAATTCCTTAGGGACTGACATCTTCATAGCAACAGAAGAGCCTGGCAGTTGGGGATTCGACGAGCCGGTTTCCGGCTATTATGATTCGAGTTCGCCGGACCCGTCGTCGTCGGCTTCGAAGAACACAGTATCGGAAAGGAATAGGAGAAAGAAGCTCAACGAGAGGCTTTTTGCACTCCGATCGGTTGTTCCCAATATAACTAAGATGGATAAGGCTTCAATTATAAAAGATGCTATCGATTATATCCAAGAATTGCATGACCAAGAGAGGAGGATTCAAGCTGAAATTTATGAGCTCGAAACAGGAAAGTTGAAGAAGATAACAGGTTATGAATTTGACCAGGATCAGCTTCCCTTGCTGCTCAGATCAAAGAGGAAGAAAACTGATCCTTACTTCAGCTTTGATTCTCCTGCTTCAAGAATTTCCCCCGTTGAAGTCCTGGATCTTAGTGTAACATACATGGGGGACAGAACAATAGTAGTGAGCATGACCTGCTGCAAAAGAGCAGATTCAATGGTTAAACTCTGTGAAGTTTTTGAATCACTGAAGCTCAAGATCATCACTGCCAATATTACTGCCGTCTCTGGAAGGCTTTTGAAAACTGTCTTCATTGAGCCACCTGTGTCCAAATCAACTTACACTATTCTTTATCTGACCTTATAAGGAATATCTGTTAGAAAAATTTCCAACTCCCTGTATAAGAAGGCTGAGCAAGAGGAGAGAGATTACTTGAAGATTAAAATAGAAACAGCCATTGCAGGTCTTAATGACCCACATAGCCCCATGAGTATCTGAGCCCACAAATGGAAAACACACACGAGAGATTATCTCTCGGCCTTTTTAGCTGTCAACGGCTGGAAACTAGTTCTCTTTCCCTGATCAGAGTTTTCCATTTTGCTCTTTCTTGGGGTTTTCATGTCACAAATTGTTTTCCTGTTGAGAGAGTTCTCCTTTCAGGGGTTCCGATAATTCGTTTCTTGGTCCAAGAAGATATCAGATGTAGGAATGTATTTACATAATAATTAGTTTGAGTGTTTACATGATAATGTTTTCCCTTTGACGTGCTTGAGTGTCTAAATGCCCGGCACATCATCAAGATTGCAATATCCAATTTCTTGACAGTTTTATCAAAAAGAAAAAAAAAAATTAGTCAACTTTGCCTATTCGACCAA 1323 40.82 MDCIGEDYYNSLGTDIFIATEEPGSWGFDEPVSGYYDSSSPDPSSSASKNTVSERNRRKKLNERLFALRSVVPNITKMDKASIIKDAIDYIQELHDQERRIQAEIYELETGKLKKITGYEFDQDQLPLLLRSKRKKTDPYFSFDSPASRISPVEVLDLSVTYMGDRTIVVSMTCCKRADSMVKLCEVFESLKLKIITANITAVSGRLLKTVFIEPPVSKSTYTILYLTL 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14199344 14204739 + XM_039022801.1 Bhi02g00701 27223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00701 229 MobiDBLite consensus disorder prediction 30 56 - -
Bhi02g00701 229 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 214 - -
Bhi02g00701 229 MobiDBLite consensus disorder prediction 37 51 - -
Bhi02g00701 229 Pfam Helix-loop-helix DNA-binding domain 50 94 IPR011598 GO:0046983
Bhi02g00701 229 SMART finulus 51 100 IPR011598 GO:0046983
Bhi02g00701 229 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 109 IPR036638 GO:0046983
Bhi02g00701 229 Gene3D - 40 110 IPR036638 GO:0046983
Bhi02g00701 229 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Bhi02g00701 229 PANTHER TRANSCRIPTION FACTOR BHLH35 1 214 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00701 Bhi06g01200 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00701 Bhi-Chr2:14199344 Bhi06g01200 Bhi-Chr6:34968400 5.41E-70 dispersed
Bhi02g00700 Bhi-Chr2:14199219 Bhi02g00701 Bhi-Chr2:14199344 5.51E-159 tandem
Bhi02g00701 Bhi-Chr2:14199344 Bhi02g00702 Bhi-Chr2:14199344 2.38E-159 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
407 PF00010 HLH 2.50E-12 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00701 - - cmo:103494233 345.895