Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00712 AAACCCAAGTTCAACAAATAATGAGAACAATTTCTCTTTCAAGATTACTTCATAGTTGAACTAGGAATTCCCACATGTAGTCTCCCTTGGCGTTTGAATAATCGCTTATTTTAGTATTTCACAATCATTTTTCTTTCCACCATAATCTGAATCAATCAATCAATCATTCTCAGGAGTTATTTGAACATCAAATCCATTTTAGTTCGAATCCTTTCATCACAGAGTATGAGCATTTGATGATCCAAAGAGGGAGCATTGCAGTCGCTTATGGTATGTTTGTTGTTTTTGGTTGGTGTCGAGTCAATTCCGGGACAGAGTTTCCAAGTCCAGAGATCGCAGAAGCAGAGGCTGAGATACAGAGCGGTGACCATTGGTATGGTATCTCTGTAGGAAAATAGGAAGAACTGTGGCGGCTACTCATAAATGTAGTATTCAAACCCAGATTCTCGATTCAGTATGAGAAGCATCTTCTTACTTGCCATTAGCTCTTTTGATTTCACTTTCCTTCCGTCTGCTGCTGTAAATTTTGGCTGTAGATGGTTAGAACATTCAATTTGAAGATCCCCTTCGTTTCGCCATTCGAGACTTGTGCACTTACGAAGCCCACGGACTTGGATTTTGAATAGTTTTGTGGAGGATCTGCAGTGAATGAAGTTCCATGTGTAGGTACACTTGAAGAACAGTTATCAGTTTTTTGGACAAATTCTCTATGAGAATACATTGGAGATCAATATGAGAGGTGCTGGAAGGAGATTGATTGAGAAGGAATCTGGAAAATGTTCTCACTCCAAGCTGGAAACTGGATCAGAGTTTATCTTTCCTCTGAAGTTGAAAAGGTGTAGCAAAATATCCCATTCCAAGCAGAAAAAATCAAGAACAAAGTCGCACTCACAGCCAATTTCTTCAACATTCAAGAGGAGACCTCTTCCTAAATCCTTGAGCAAGGGGAATAAAAATGTGACAATTAGACAACTGGCCGTTAAAAAATTTCAGCTAAAAAAACTTGATACAAAATCTTCCAAGGAGTTACTTTTGTCAAAGCTTCAAGGTGGTAAATCCCTGTCATCAGCTAATACGAAAGGGAATGCAGAAAAGGTTGAGCCGGTGGTCAAGATAAACCAACAAAGGAAAAGGAGGAAGAACAAAGGAAAAAAGGAAAAAGTGGAGTTAGATGAAGCTTCTCGCCTACAGAGGAGAACAAGATACCTTATAATTAAAATGAAGCTAGAGCAAAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGCCGAGAAAAAATTAGGCCAGAAAAGGAACTTCAGAGAGCCATGAAGCAGATATTAAAGTGCAAACTTGGAATCCGTGATGCTATTCGCCAGCTGGATTTGCTTGGTTCAGTAGGATGCATTGAAGACTCTGTTATTGGTCCTGATGGATCTGTCTACCACGAACATATATTCTGTGCAAAATGCAAATTGCGTGAAGCTTTCCCGGACAATGACATTATACTTTGCGATGGGACATGCAACTGTGCTTTTCACCAAAAATGTCTGGATCCACCATTAGACACGAAAAATATTCCTCCAGGAGACCAGGGTTGGTTTTGCAAATTTTGTGAGTGCAAGATGGAAATATTGGAAGGAATGAATGCACATCTTGGTACTCGATTCTCATTGAACATTAGTTGGGAGGACGTTTTCAAAGAAGAAGCTGCTTTCCCGGATGGTGGAAATGCGTTGCTTAATCATGAGTAAGATTGGCCCTCAGATGATTCTGAAGATGATGACTATGATCCAGATAAGAAGGAGAATAGCTATGACAACGCAAGTGGGGAAGAAAATGATAAGGATGTTTTGGAGGAGTCCAGTAGTTCAACCAGCTTGAGTTGGTCTTTAGATGGCGAGGATTTAACTGCTAAAGATGGTATTGGATGTGAAGATCACTTGGGTGCTGGTAGCAGCTTAGTTTCTGATGGATCCAATGAAGAGAGTATTGCATGCGGCCGTCGGCAGCGGCAGGCTGTTGATTATAAAAAGTTATATGTTGAAATGTTTGGAAAGGATGCTCCACCACACGAACAAGAAGAAGTTAGTGAAGATGAAGACTGGGGACCTGCAAAAAGAAGACGGAGAGAAAAGGAATGTGATGCTGCAAGTACTCTCATGTCCCTCAGTGAAAGCGAAAAAAAGAGTCAAGACATTGACATGGCAGCAGAGAAAAAACTTCCCAATTCTCACAGTAGATCATGTTTCAGAATCCCACGTTATGCAGTTGAGAAACTTCGCCAAGTATTTGCTGAAAATGAACTTCCCTCTAGAGACGTGAAGGAGAACCTTTCAAAAGAATTGGGTCTTGATGCTGAAAAGGTCAGCAAATGGTTCAAGAATGCACGGTACTCTGCACTAAGAAATAGAAAGGCGGAGGGAGCAACACAACCCCACAGTTCTCATAAGACTTCCAATGAGTCCAGACTAGCAGATTCAAAGGAAATGTCTGAGAATCTTCTTTCATTTGAGGACGCCCCAGTAAAAGAACTGCAGCAGAAGTTGCGGGGAAGTCATTGGAAGAAAAATCAGCACAGAAAATCATCACTTGTATCTTCCAACTATAACAAGGATGCTTTTGATTTTGGTGATGATATAAGCTTGAAGAATCTCCTAAAGAATAGAAAAACGAAGGTAAAGAGGGTAAACTTTGTAGCTAGAGGTGGAGGTCAAGAAGCAGAAGTGGAGATGGAAAGATTGTGTAAAATTAATGGTAGATTAGAGGCAATGAAGCAGCAATTACTTAGACTATCAAATAAGAAAGATGATGGGATTTTAGATAGGTCACACATGTTTGAACAGACTATTGTATATGTTCCTGTGGCAGTGTTAAAGGAAAAGGTTTGATCCTGTACAGTGACTTTAATTCTTCTACCCCATATTCAAAGTTGGGGATCTTATGATAAATCTTAAATACCTGATTTTTGTTTTTAAACTTTGAATCAGATGCTACAGGTTCCCATATTGCACGAGTGAAATATTCTCTTGAACATTTCTTCTGCCA 3037 39.94 MRGAGRRLIEKESGKCSHSKLETGSEFIFPLKLKRCSKISHSKQKKSRTKSHSQPISSTFKRRPLPKSLSKGNKNVTIRQLAVKKFQLKKLDTKSSKELLLSKLQGGKSLSSANTKGNAEKVEPVVKINQQRKRRKNKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAMKQILKCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTKNIPPGDQGWFCKFCECKMEILEGMNAHLGTRFSLNISWEDVFKEEAAFPDGGNALLNHEXDWPSDDSEDDDYDPDKKENSYDNASGEENDKDVLEESSSSTSLSWSLDGEDLTAKDGIGCEDHLGAGSSLVSDGSNEESIACGRRQRQAVDYKKLYVEMFGKDAPPHEQEEVSEDEDWGPAKRRRREKECDAASTLMSLSESEKKSQDIDMAAEKKLPNSHSRSCFRIPRYAVEKLRQVFAENELPSRDVKENLSKELGLDAEKVSKWFKNARYSALRNRKAEGATQPHSSHKTSNESRLADSKEMSENLLSFEDAPVKELQQKLRGSHWKKNQHRKSSLVSSNYNKDAFDFGDDISLKNLLKNRKTKVKRVNFVARGGGQEAEVEMERLCKINGRLEAMKQQLLRLSNKKDDGILDRSHMFEQTIVYVPVAVLKEKV 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14274286 14283324 - XM_039022552.1 Bhi02g00712 27234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00712 715 Pfam Homeodomain 507 551 IPR001356 GO:0003677
Bhi02g00712 715 SMART PHD_3 239 292 IPR001965 -
Bhi02g00712 715 SUPERFAMILY Homeodomain-like 499 562 IPR009057 -
Bhi02g00712 715 Pfam PHD-finger 239 294 IPR019787 -
Bhi02g00712 715 MobiDBLite consensus disorder prediction 453 469 - -
Bhi02g00712 715 Gene3D - 498 571 - -
Bhi02g00712 715 MobiDBLite consensus disorder prediction 329 413 - -
Bhi02g00712 715 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 1 689 - -
Bhi02g00712 715 CDD homeodomain 504 557 IPR001356 GO:0003677
Bhi02g00712 715 ProSitePatterns Zinc finger PHD-type signature. 240 291 IPR019786 -
Bhi02g00712 715 MobiDBLite consensus disorder prediction 38 73 - -
Bhi02g00712 715 ProSiteProfiles 'Homeobox' domain profile. 496 556 IPR001356 GO:0003677
Bhi02g00712 715 SUPERFAMILY FYVE/PHD zinc finger 230 297 IPR011011 -
Bhi02g00712 715 SMART HOX_1 498 560 IPR001356 GO:0003677
Bhi02g00712 715 MobiDBLite consensus disorder prediction 351 372 - -
Bhi02g00712 715 CDD PHD_PRHA_like 239 291 IPR045876 -
Bhi02g00712 715 ProSiteProfiles Zinc finger PHD-type profile. 237 294 IPR019787 -
Bhi02g00712 715 MobiDBLite consensus disorder prediction 438 493 - -
Bhi02g00712 715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 288 IPR013083 -
Bhi02g00712 715 PANTHER POLYCOMB PROTEIN PCL 1 689 - -
Bhi02g00712 715 MobiDBLite consensus disorder prediction 556 583 - -
Bhi02g00712 715 MobiDBLite consensus disorder prediction 110 144 - -
Bhi02g00712 715 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01707 Bhi-Chr1:36202239 Bhi02g00712 Bhi-Chr2:14274286 1.65E-09 dispersed
Bhi01g01708 Bhi-Chr1:36203299 Bhi02g00712 Bhi-Chr2:14274286 3.37E-51 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
412 PF00628 PHD 1.10E-09 CL0390 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00712 - - csv:101212164 1201.42