Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00752 TTCAAACTTCACTCTCAAAACCCCCAAAACCCCATTTTCCCTTTTACTCTCTTTCCTATTTCCAAAGCTTCTCCATTTTTTTTTAAAAAAAAAATTCTTAAAAAAAATGAATAACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCCTCTCAAAATTGGCTTGCTTTTTCTCTCTCTAATAATCCCAACTCTCTTTCTCTCTTCCATCACCATCCTAATTCTACTGATCTTTCTATTTTCTCGCCCACCGCCGCCCCCAAGCTTGAGGACTTTCTCCGGGGAGCTTCCAATCCTCCGCCGCCCTCGCCGCCTCCCTTTCACTTTTCCTCCCATCAATCTGAGATTTGTGATTCTGATCTCAAAACTATAGCCGCTAGTTTCCTTCGTGGACCGCCAACCACCCATTTCCCTGAACAACACTTTCAACATCTACACGCGCCACCTCCGCCGCCGCCGCCGACTCAATCTGATACTTCACCGCCCCCACCACCTAAGAAGGCTGTTGATACTTTTGGCCAACGCACCTCTATTTACCGCGGTGTTACAAGGCACAGGTGGACTGGTCGATATGAAGCTCATTTGTGGGATAATAGTTGCAGAAGAGAAGGTCAGAGTAGAAAAGGAAGACAAGTTTATTTGGGTGGTTATGACAAAGAAGAAAAAGCAGCCAGAGCTTATGATCTCGCCGCTCTCAAGTACTGGGGTCCGACCACCACCACCAACTTTCCGGTGTCGAACTACGAAAAAGAACTGGACGATATGAAGAACATGACCAGACAAGAATTTGTTGCTTCATTAAGAAGGAGAAGCAGTGGTTTTTCTAGAGGAGCTTCTATATACAGAGGTGTAACAAGGCACCACCAACATGGCAGATGGCAAGCAAGAATCGGAAGGGTTGCTGGCAATAAAGATCTCTATCTTGGAACATTCAGCACTCAGGAAGAAGCAGCCGAAGCTTATGATATAGCAGCCATCAAATTCCGAGGCCTCAACGCAGTCACAAACTTCGACATTAGTCGTTACGACGTGAAGAGCATTGCCAGCAGCAACCTCCCCATAGGAGGGATGTCAGGCACCAAATCCAAAACCACCTCCGACTCTGCCCCCTCGGATGGGGGCAGTCGATCGACCGAAGAACGCGACGTCCACCATTCTCCTGCATCCTCAACTGTGCAGCCGAACAACAACTCCTCGAGTACTCTTAGCTTCACAATGCCCATCAAACAAGACCCATCGGATCAATACTGGTCCATTCTCGGCTACAATAACCCCAGCTCCTACAACACAAGCCTCGTCAAGCCCGACGATGTTCCACCGTCGTCATCGAGGTTTCAACAACCTGGATCCACAATGTTTCCCGCCATCACCGACCTAGCGTCGAGTGGATCCACACTGACGGAAGGCGGGATGTATGGTGGAATGTACGTACAACAACAACAATATGCAACACCAGTTGCATTAAGTAGCGGAATAAGCATTGAGATTGGGCAATCAATGAGGGGGTTCGAAGGTCATACAAAACCAAGCCTTTTTCAGACGCCAATATTTGGAATGGAGTGAAAAAAAAGGTGTGAAATTTGCATTAAGTTTGAAGAAATTAACAGCTGGTGGGTTTTGACCAAGGATCCAACTTAGAATCATAGACTCAAAAAAGGATCTAGTGGACTGACATTTTAGGAATAGCTATAGCTAGGAAGCTGACTCTAGTAATGAAATTGTACTGACTTTTTTTTTTTTTTTTTTTTTTTAAGACTATGCTTCAAATTAATTAGGTCCCTTTGGTTTTTTTTTTTTTCCCTGCATTTTCTTTACGGTTCAGTCAAGTCATATTTTGTCTTTATTATTGGGAAAATTTCTATAAAAAATGGTTTTTATTTTTTCTA 1884 44.27 MNNSSSSSSSSSSASQNWLAFSLSNNPNSLSLFHHHPNSTDLSIFSPTAAPKLEDFLRGASNPPPPSPPPFHFSSHQSEICDSDLKTIAASFLRGPPTTHFPEQHFQHLHAPPPPPPPTQSDTSPPPPPKKAVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELDDMKNMTRQEFVASLRRRSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASSNLPIGGMSGTKSKTTSDSAPSDGGSRSTEERDVHHSPASSTVQPNNNSSSTLSFTMPIKQDPSDQYWSILGYNNPSSYNTSLVKPDDVPPSSSRFQQPGSTMFPAITDLASSGSTLTEGGMYGGMYVQQQQYATPVALSSGISIEIGQSMRGFEGHTKPSLFQTPIFGME 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15100969 15104269 - XM_039022766.1 Bhi02g00752 27274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00752 484 PRINTS Ethylene responsive element binding protein signature 143 154 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 PRINTS Ethylene responsive element binding protein signature 284 304 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 ProSiteProfiles AP2/ERF domain profile. 142 208 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 393 - -
Bhi02g00752 484 SMART rav1_2 142 214 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 SMART rav1_2 244 308 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 PANTHER OS04G0653600 PROTEIN 16 393 - -
Bhi02g00752 484 MobiDBLite consensus disorder prediction 314 370 - -
Bhi02g00752 484 Pfam AP2 domain 142 200 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 Pfam AP2 domain 244 294 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 Gene3D AP2/ERF domain 244 304 IPR036955 GO:0003700|GO:0006355
Bhi02g00752 484 Gene3D AP2/ERF domain 142 210 IPR036955 GO:0003700|GO:0006355
Bhi02g00752 484 ProSiteProfiles AP2/ERF domain profile. 244 302 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 MobiDBLite consensus disorder prediction 351 370 - -
Bhi02g00752 484 MobiDBLite consensus disorder prediction 93 135 - -
Bhi02g00752 484 SUPERFAMILY DNA-binding domain 243 304 IPR016177 GO:0003677
Bhi02g00752 484 MobiDBLite consensus disorder prediction 108 132 - -
Bhi02g00752 484 SUPERFAMILY DNA-binding domain 141 210 IPR016177 GO:0003677
Bhi02g00752 484 MobiDBLite consensus disorder prediction 314 337 - -
Bhi02g00752 484 CDD AP2 141 210 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 CDD AP2 243 304 IPR001471 GO:0003700|GO:0006355
Bhi02g00752 484 MobiDBLite consensus disorder prediction 55 77 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00752 Bhi-Chr2:15100969 Bhi06g00946 Bhi-Chr6:25822556 4.05E-127 dispersed
Bhi11g00894 Bhi-Chr11:27674997 Bhi02g00752 Bhi-Chr2:15100969 3.85E-126 dispersed
Bhi11g03021 Bhi-Chr11:82199153 Bhi02g00752 Bhi-Chr2:15100969 1.30E-09 dispersed
Bhi02g00752 Bhi-Chr2:15100969 Bhi03g01071 Bhi-Chr3:21679247 2.12E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
413 PF00847 AP2 3.50E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00752 K09285 - csv:101210453 706.827