Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00794 GATTGCAGAAAAACACAGGCCCCCTCCTACTCCCTTCCCTTCCTCTCTAAAATCAAATCCCATTCATATCTCTCCTCCCAGACTCCTCTAAGCTTTCTTGGCGGGAGACACGGGAGCCTTCGCAATTCACAGCGCCATATCCACTATGGGAATTGACGGTGACAGTGTTGTAAAGGGTTTCGGCGGCGGCTGGGGCGTCGTCGCCAAACCCTGCGATTCCTGCAAGACTGGCCCTGCTGCCGTCTATTGTCGACCCGACTCTGCTTTCCTCTGTCTTCCCTGCGACGCCAAAATTCACTGCGTCAACAAGGTCGCCTCTCGCCACGAGCGCGTCTGGATGTGTGAGGTTTGTGAACAAGCTCCTGCTGTGGTCATGTGTAAGGCTGATGCTGCGGCTCTCTGTGTCACCTGCGATGCTGATATTCACTCTGCTAATCCTCTGGCCCGTCGCCACGAGCGTGTCCCTGTCGAGCCTTTTTTCGACACGGCTGAATCGGTTGTTAAATCCTCTTCTGTTTTGAATTTTCTGGTCCCTAATGAAACTAATGTCTGCGACGGTACCCATCACCACGAGGAGGTGGAGGTTGCTTCCTGGCTTTTATCCAACCCGTCTTTCAACTCTAAGCTCGTGGACGGCCCTGAAATCAAACCCCCTGGTGGTGATCATCTGTTCTTCAATGAAATGGATTCTTTTATTGATTTTGAATACCCAAACCCAGTCAACAATCACAACGCTATTAACGACAGCGTCGTCCCTGTTCAGACGAAGCCACTCTCTACGCCGGTGATTAACCATACCCACTCCCCTGAAAATTGCTACGACATTGATTTTTGCAGATCCAAGCTCAATTCATTCGGCTATCAACCTCAATCCTTGAGCCACAGTGTTTCTTCCTCCTCCCTAGAAGTCGGAGTTGTTCCAGAAGGGAATTCGATGTCGGACATATCATACCCGTTGGGTCAAACCGTGAATAGTGGAGCGGATTCAGGGCTACCGTTATCAGGATCTGGCAACCAAGTGACACAATTATGTGGAATGGATCGAGAAGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACCGGAAATTCGAAAAGACAATCAGATACGCTTCAAGAAAAGCTTATGCGGAAACCCGGCCCAGAATCAAAGGCCGGTTCGCTAAACGGACTGATATGCTATCAGAGGTTGATGAAATCTATGGCTCAGCTGCTTCGTCTGTGTTCCTGACGGACGCCCAATACGGCGTCGTACCAACGTTCTGACTATGACTTGGCTGAATCGCCCAACTGAAACGAAACCCAATCCAGTGCTGCGTAGATTATAATTCTTATTGTGCACCTTTTAATAAATGAACGATAGATTATGGCAAATTATGTGTTTGATGATGATGTAAAAAAATCAATGTCTGATGACGTGGCGGGGTTTTAGCCGTTGATTTGCAGGACCATGGGTGTTCAGGTAGAGGTTCGTTTACGCTATCACAAGTTGCTTGTTTTTTTTTTTCACCCTCATTTCCTCGCAAATATAACCGATTTGCCCTTCCAAA 1551 48.42 MGIDGDSVVKGFGGGWGVVAKPCDSCKTGPAAVYCRPDSAFLCLPCDAKIHCVNKVASRHERVWMCEVCEQAPAVVMCKADAAALCVTCDADIHSANPLARRHERVPVEPFFDTAESVVKSSSVLNFLVPNETNVCDGTHHHEEVEVASWLLSNPSFNSKLVDGPEIKPPGGDHLFFNEMDSFIDFEYPNPVNNHNAINDSVVPVQTKPLSTPVINHTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVGVVPEGNSMSDISYPLGQTVNSGADSGLPLSGSGNQVTQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDMLSEVDEIYGSAASSVFLTDAQYGVVPTF 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 16495557 16497194 + XM_039023869.1 Bhi02g00794 27316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00794 373 CDD Bbox1_BBX-like 22 65 - -
Bhi02g00794 373 ProSiteProfiles CCT domain profile. 300 342 IPR010402 GO:0005515
Bhi02g00794 373 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 9 373 - -
Bhi02g00794 373 ProSiteProfiles Zinc finger B-box type profile. 23 65 IPR000315 GO:0008270
Bhi02g00794 373 SMART bboxneu5 66 108 IPR000315 GO:0008270
Bhi02g00794 373 SMART bboxneu5 18 65 IPR000315 GO:0008270
Bhi02g00794 373 Pfam B-box zinc finger 63 108 IPR000315 GO:0008270
Bhi02g00794 373 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 9 373 IPR045281 GO:0009909
Bhi02g00794 373 CDD Bbox1_BBX-like 66 108 - -
Bhi02g00794 373 Pfam CCT motif 300 342 IPR010402 GO:0005515
Bhi02g00794 373 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00794 Bhi06g01274 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00794 Bhi-Chr2:16495557 Bhi03g00888 Bhi-Chr3:16612982 4.32E-08 dispersed
Bhi01g02210 Bhi-Chr1:52511362 Bhi02g00794 Bhi-Chr2:16495557 3.63E-54 transposed
Bhi04g00075 Bhi-Chr4:1964514 Bhi02g00794 Bhi-Chr2:16495557 1.59E-107 transposed
Bhi02g00794 Bhi-Chr2:16495557 Bhi06g01274 Bhi-Chr6:38320092 7.02E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
415 PF00643 zf-B_box 6.70E-07 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00794 - - csv:101214816 698.353