Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00875 CTCTCTAAAAACCGTTCTTTCTCTCACCTAATCTATTCCTTCGATGTCACTAACACGCAGACTCCGATAACTCGATTTCGGAATCGGCCCTTGATTTCGGCTTTGCTTCGGACACTATAAAAGAAGTTGCAACAGTTGTGGGTGACTTTACTCTCTTTTGAGGGAGGAGAATCGGCCATGGCGGAGCCGGAAAGCTTCGAAACTGACCAACTAGGAAGCTCCAAGGCGGCTACTGCAGGGCAGGAAGATGATGAAGAAGAAATGGAAGATTCGGAGAATGAATCGGAGGTGGAGTTGGAAAGAGGAGGAGGAGGAGGAGTGGTGAGTGAGTTGCAACCGACTGAGTTGAGGACCGGTTCGTCGGTTAGTGAAGCTGTGGTGAGGGGTTCATGTTCTGAAACCCTAACGGTTCTTTCTATGAATCAGTCCTCCGAGAACGGTCGGTGTGATGGTTTGCCTGTCAATTCTGCTGCGCAGTCACTTGAAGGAGCTGAATTGAAGCCGCAAGCTCGATCTTCCCGCAATGAGCCTGTGGCTGTTGAAGCAACTCAGACAGATAAGGTTCAAGAAGAAAGCCAGCTTCAGGTGTCAACATGTAAAGGACCTGATTCAGACCAATCACCAACTTCAGTTACCCAGTCTATCTCATCCTCCGCAAGTCCAAGTTTATCTGAACATAAGATGTCACCTAAGAAAGTCCAGAAAGAATGTAAGGCAGAACCAAGCCAGAAAAATTCCTCCAACCATAAAACTGCATCGTCTGTTCCCAATGTAAGGACACCTGCTTCTGATGGTTACAATTGGAGAAAATACGGTCAGAAGCAAGTGAAGAGTCCTAAGGGTTCACGTAGCTATTACAAGTGTACATATTCTGAATGCTTTGCTAAGAAGATTGAATGTTGTGATCACTCAGGGAAAATAACAGGGACTGTTTACAAGAGTCAACATAGCCATGATCCACCTAGGAAGATTAGTATCCCGAAGGAAAGTAGGCTCGTCCCTTATGTTGAGCCCGTGGTTAAAAAAATCATTGCAGAACATTCCAGAAGAGTAATTAATGATTCAGATCCTCCTATGCCTTCAAAAGAACCGTTACAGGAAACAGCTATAGTCCTTGAAAGGAAACGACAGTATTCAAATGACTCTGATGGAAATGATGAATTTAAAATCAAAGATGAGAATGACGATGAACCTGAGACAAAACAGAAAGTTAAGAAAAGCAGTGCGGGAAACTCAGGTACTCCCTTAAAACCTGGAAAGAAACCGAAATTTGTGGTGCATGCAGCAGGTGATGTGGGAATCTCGGGTGACGGATACAGATGGCGCAAGTATGGTCAGAAAATGGTGAAAGGAAACGCTCATCCTAGGAACTACTACCGATGTACTTCTGCTGGGTGTCCAGTCCGTAAACATATCGAATCAGCAGTAGAAAATCCAAATGCAGTAATTATAACATACAAGGGAGTTCATGATCACGACATGCCTGTACCGAAGAAACGACATGGTCCACCAAGTGCTCCTCTTGTAGCTGCTGCAGCGCCAGTCTCCATGATCTATACGCAACCAAAGAAAACCGACGCAGTCCAGAGCCAAATTTCTTCAACACAGTGGTCTGTGGATGCTGAAGGAGAGTTGACTGGTGAGGCCTTGGAGCTTGGGGGTGAGAAGGCAATGGAATCTGCTCGAACACTTTTGAGCATTGGATTTGAAATCAAGCCTTGCTGAACCAAACGCCTTTCAAGGAGTAACTATGGGGACTATTTATGAACATGTAGCTGGGCTGCCTCTGTATGAGTGAAATATTTGATTAGCAGGTTTGGTTATTTTTGAGCTATTTCCTTTTGTTTTTTTTTCCTTCTCCCTTTTTTCATTCTCCTCTTTCTCTTAGCCATTTATGTAACAGTTGTGTAAATTTGGTTTCAACGTACACCTCCCTGATATGGCACTGAGATGATTTGCACTGTTTTTGCTACATCTCTTTCCACTTTCCAGGGTTAGGTTCAATTTCTGGTTTTTAGAAGAGACTGGTAACAACCTAGCAGCTTTCTTACTTTTTCCCCCCTCCAATTTTATTAATGAGAGACTATTATTTCGGATTGGTATCACCA 2108 43.98 MAEPESFETDQLGSSKAATAGQEDDEEEMEDSENESEVELERGGGGGVVSELQPTELRTGSSVSEAVVRGSCSETLTVLSMNQSSENGRCDGLPVNSAAQSLEGAELKPQARSSRNEPVAVEATQTDKVQEESQLQVSTCKGPDSDQSPTSVTQSISSSASPSLSEHKMSPKKVQKECKAEPSQKNSSNHKTASSVPNVRTPASDGYNWRKYGQKQVKSPKGSRSYYKCTYSECFAKKIECCDHSGKITGTVYKSQHSHDPPRKISIPKESRLVPYVEPVVKKIIAEHSRRVINDSDPPMPSKEPLQETAIVLERKRQYSNDSDGNDEFKIKDENDDEPETKQKVKKSSAGNSGTPLKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNAHPRNYYRCTSAGCPVRKHIESAVENPNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPVSMIYTQPKKTDAVQSQISSTQWSVDAEGELTGEALELGGEKAMESARTLLSIGFEIKPC 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18455310 18459107 - XM_039023580.1 Bhi02g00875 27397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00875 515 MobiDBLite consensus disorder prediction 83 224 - -
Bhi02g00875 515 MobiDBLite consensus disorder prediction 117 168 - -
Bhi02g00875 515 SUPERFAMILY WRKY DNA-binding domain 372 436 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 MobiDBLite consensus disorder prediction 54 69 - -
Bhi02g00875 515 MobiDBLite consensus disorder prediction 1 69 - -
Bhi02g00875 515 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 23 513 - -
Bhi02g00875 515 MobiDBLite consensus disorder prediction 169 184 - -
Bhi02g00875 515 MobiDBLite consensus disorder prediction 23 37 - -
Bhi02g00875 515 MobiDBLite consensus disorder prediction 185 202 - -
Bhi02g00875 515 MobiDBLite consensus disorder prediction 315 363 - -
Bhi02g00875 515 Pfam WRKY DNA -binding domain 378 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 Pfam WRKY DNA -binding domain 205 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 513 IPR044810 GO:0003700
Bhi02g00875 515 MobiDBLite consensus disorder prediction 315 345 - -
Bhi02g00875 515 SUPERFAMILY WRKY DNA-binding domain 201 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 Coils Coil 22 42 - -
Bhi02g00875 515 ProSiteProfiles WRKY domain profile. 204 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 Gene3D WRKY domain 361 437 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 Gene3D WRKY domain 186 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 ProSiteProfiles WRKY domain profile. 371 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 SMART WRKY_cls 203 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00875 515 SMART WRKY_cls 376 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00875 Bhi-Chr2:18455310 Bhi05g01440 Bhi-Chr5:50589624 5.87E-11 dispersed
Bhi02g00875 Bhi-Chr2:18455310 Bhi06g00364 Bhi-Chr6:7936850 4.01E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
418 PF03106 WRKY 1.90E-23 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00875 - - bhj:120071353 949.118