Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00899 GCGTATATGGATGATGGAGAAAGAGAAAGTGGAACAGAGTTTACCTTAAAGCAATTATAATAAGACAACGGAGGAAAAAAGGAAGAAGGGTTTGGCTTAAAATACTCAAAAAGATTTCTGTTTTATTTGATTCAATTGAATTGAAAATTTGTTTTTTATTTTCTTCTTCCTTCCCTCTGTTTTGGGCTATCGCCATCATTGGCCATTTCTACAGCTTTCTTCACTTTCTGTAATCTCCTTCTTCTTCTCTTGCTTCCGCCCAATCAATTTCTTTCGCTAATCTCATCTGGGTTTTTGAGAAAAATTAAAAGGGGGCTCGGAAAACATTGTACCCACATCGAAAATTTCTCGATTTCTCTTTTTCTGTAAGATCTCAACCCCTTTTTTCTTCTCTCCTTCACCATGACCGTGGAGGATCATTCTGTTGTTGCAGTTGGTGATGATGGCGCCACTGATCATTTTCCTGTTGGGATGCGAGTTCTTGCTGTTGACGACGACCCTATTTGTCTCAAAGTACTTGAGTCTCTCCTCCGTAAATGCCAATATCATGTTACGACGACGAAGCAGTCCATTGAAGCTTTGAAGATGTTGAGAGAAAATAGAAACAAGTTTGATATGGTTATCAGTGATGTGAACATGCCTGATATGGATGGTTTCAAGCTTCTTGAGTTGGTGGGGCTTGAAATGGACCTACCTGTAATCATGTTATCAGCACATAGTGATACTGAGCTTGTTATGAAGGGGATTGCGCACGGTGCATGTGACTATCTGTTAAAACCAGTTCGAATCGAGGAGTTGAAAAACATTTGGCAGCATGTGATTCGGAGAAAAAAGCTTGAACCGAAGGCAAAAAACAAGTTCCCTAGTCAAGATAAGGTTCGAAATGGAGGCCATGAAGGTGACCAAGGTTTCTCACCAACTAGTAATGCAGACAACGCAAAATTCAATAGGAAGCGGAAGGACCAAGATGATGATGAAGATGAAGAAGGAAAAGAGAATGGGCTTGATAATGATGACCCCTCGAACCAGAAAAAGCCTAGGGTAGTGTGGTCAGTTGAGTTACATCGTAAGTTCGTTTCAGCGGTTAATCAATTGGGTCTCGAAAAGGCTGTGCCCAAAAAAATCCTGGATCTGATGAATGTTGAAGGACTTACCAGAGAAAATGTGGCAAGTCATTTGCAGAAATATAGGCTTTATCTGAAAAGAATCAGCAATGTGGCATCCCAACAAGCTAACATGGTTGCTACATTTGGGAGTAAAGATGGCACTTACATGCGCCTCGGTTCACTAGATGGATATGGAGAGTTACATGGCTTTGCAGGATCTGGGCGGCTTCCAAACTCTTCATTATCCTCTTATTCACCTGTTGGAATGCTTGGAAGATTGAACTCCCCGGCTGGAATGAGCCTGCGTGGAATCACTTCTTCTGGACTGATACAGCAAAGCTCCCAAAATTTGAACTGCGCCATTAATAGCCTTGGCAAGCTCCAACCAACTACTATGCTGCCTCCTAATCAAACTACTAATATGCTTCAAGGAATTCCAACGTCACTTGAGATCAGCCAGTTGCAACACAGCAAGTCCATCACTCCCATTGGGGACTTCAATTCAATGAATGAGACTTCCGCATTTGGAGTTCCCAGCAGTTTTTCTGAAACTAGAGCGAATATTGGAAATTCAACCTATTCGGTTTCTCCTGGCCCATTGATGTTACAAGGAACAATGGCAACATATGGAAATCAGACTTCCCTTAGAGTGGATCCGCTAAATGGAGAAACTTTTGACATAGACATAGGCGGTTCAAATTTTTTGGATCCTGAACCTTCTAATGGAAACTGGCAGGGAGCAGCACATTTGTCTAGATTCTCAGCAACTTCGTTGACCCCCAATGAAGCTTATCCCAATGATCAATTGCATGCAATGAACACGAGCATTTCTTCTGCCCCCTCAACGATTGGGAACATCTCGGTTGATTTTTCCTCTAGAAGTGCAGGTTCAGCTCCCTTACTGGATTCAAGAGACATGCAATGCCAGGCAAGGGTAGTTGGCAGCGTTATTCAAGCTATGAATACCATGCCAAAGCAGAGATGGGAAGAACATAAACATGATTACAATCGAAACGTGCAGCATAATCTTGGTGCAATCAATTCTCTTGTTTCTAACAATGGGACTCTAACCCCATTAAGCCAGAGTTTCAATCAGAATAGTCTAGTATGTGATGGAAAGGTCAGTTCATCTTTGATAGTCCCATCAAATGCTGCTCCACTGTCCTTCCCTGAACATAGTATGGTTGAAAAATTGGGTCGGAACACAAAGATGAATGTGGATGGAAACTACCTTTTGAATCAAACAAAGTCACCGGATGGATCAATTCAAGGCAGTTTCGAGTCCTTGGATCATATCATGAATTCGATGATCAAACAGGAACAAAATGAAATACCAGAAATGAATGGAGAATTTGGATTTGATCATTTCTCTTTAGGATCATGTATTTGAGATCTCTACCTGCTGACTGTTGGATGGAAACAAAGGCATTAACAGCAATTCAGTGATCCAAAGCAGTTCGTGTATGTACCATCATGTAATTCTTTGTCGGTTTGGTTTCTTTCTACAAGGCTCCATCTTTGTCTGTTCATCCATTTACTGATGCAAAACATCTGGTTTCGAGGTTGTTATAACGTAACAGCAGACAATGCCCCTCCTTTTCCTTGTTCATAAAATAATGACAGGACAACTTCAGTTTTCTCTTAACCTTTTTTCTTGTCCTTTGAGAAAGAAAGTTGCTTGAAATGTAACATGAGAAGCCTACTGTTTGATTAATTAATACAGATTTCCAATGCTTCATTCA 2848 41.01 MTVEDHSVVAVGDDGATDHFPVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALKMLRENRNKFDMVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGACDYLLKPVRIEELKNIWQHVIRRKKLEPKAKNKFPSQDKVRNGGHEGDQGFSPTSNADNAKFNRKRKDQDDDEDEEGKENGLDNDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISNVASQQANMVATFGSKDGTYMRLGSLDGYGELHGFAGSGRLPNSSLSSYSPVGMLGRLNSPAGMSLRGITSSGLIQQSSQNLNCAINSLGKLQPTTMLPPNQTTNMLQGIPTSLEISQLQHSKSITPIGDFNSMNETSAFGVPSSFSETRANIGNSTYSVSPGPLMLQGTMATYGNQTSLRVDPLNGETFDIDIGGSNFLDPEPSNGNWQGAAHLSRFSATSLTPNEAYPNDQLHAMNTSISSAPSTIGNISVDFSSRSAGSAPLLDSRDMQCQARVVGSVIQAMNTMPKQRWEEHKHDYNRNVQHNLGAINSLVSNNGTLTPLSQSFNQNSLVCDGKVSSSLIVPSNAAPLSFPEHSMVEKLGRNTKMNVDGNYLLNQTKSPDGSIQGSFESLDHIMNSMIKQEQNEIPEMNGEFGFDHFSLGSCI 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19158108 19162471 - XM_039023876.1 Bhi02g00899 27421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00899 697 SUPERFAMILY CheY-like 23 148 IPR011006 -
Bhi02g00899 697 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Bhi02g00899 697 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 678 IPR045279 GO:0009736
Bhi02g00899 697 SMART REC_2 24 136 IPR001789 GO:0000160
Bhi02g00899 697 MobiDBLite consensus disorder prediction 149 164 - -
Bhi02g00899 697 MobiDBLite consensus disorder prediction 147 210 - -
Bhi02g00899 697 SUPERFAMILY Homeodomain-like 209 268 IPR009057 -
Bhi02g00899 697 PIRSF RR_ARR_type-B 1 697 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bhi02g00899 697 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Bhi02g00899 697 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Bhi02g00899 697 Gene3D - 207 270 - -
Bhi02g00899 697 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 678 - -
Bhi02g00899 697 CDD REC_typeB_ARR-like 26 140 - -
Bhi02g00899 697 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
Bhi02g00899 697 Gene3D - 24 178 - -
Bhi02g00899 697 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00899 Bhi-Chr2:19158108 Bhi09g02983 Bhi-Chr9:77402042 0 dispersed
Bhi02g00898 Bhi-Chr2:19158108 Bhi02g00899 Bhi-Chr2:19158108 0 tandem
Bhi02g00899 Bhi-Chr2:19158108 Bhi02g00900 Bhi-Chr2:19158580 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
426 PF00072 Response_reg 2.30E-25 CL0304 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00899 K14491 - csv:101213687 1235.71