Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01038 GATGGACTCGGCAAATTTATTTGCAATTGCCAGTCGGCCCACCAAAAAGAAAATAAAAATTAATAATAATAATAATAATAAAAGCTAGACTATTCTTCTTCAGCGTTCAACCCAGAAACAGATTTCATTTCACAGAAGAAAAGAAATGTAAGAATCTGTTCTGGTTAACAGAAACCTTGAGGAAGAAATTTACATGGAGGATAAGAAAGCCAACATAATTGCTCTTTCCTTAATCCTCTCCCTCATCCTTCTCCTCATTCTTGCTCGAGTTTTCCTCAAACTTTCCAAGTCTTTTTTCCTCATTTGTGGGATCGATGTCTCACTCACCGCCGCTATCTTGGTCTACATGATCATCAGACTACGATTCAACCGGAGAAGAAAACAGCTCGAGTCTCAGTTAGTTTCCGAAGGTCGAGAGCTTCGGATCGAGTACAGTTTTTTAAGAAAAGTCGCCGGAGTTCCGACCAAGTTCCGGTACAAAGAGCTCGAGGAGGCCACCGACTATTTCAGAGCGTTGATAGGGCGAGGATCCTCCGGTTCCGTCTTCAAAGGGATCCTCAAAGACGGCACTGCAGTAGCCGTCAAGCGGATCGAAGGCGAGAATCGAGGAGACAAAGAGTTTCGAGCGGAGGTATCCGCCATTGCTAGTGTTCAACATATAAATCTCGTTCGTCTAATTGGTTACTGTACTAATTCATCTGGACCTCGATTTCTCGTTTACGAATTCGTATCGAATGGATCGTTAGATTGCTGGATTTTCCCCAAAAAACCTAAGCACAAGAATCGAAATCGCCCTGGCGGTTGCTTAGCTTGGGATCTGAGATATAGAGTCGCCATTGATGTAGCTAAGGCCCTAGCCTACCTTCACCATGATTGCCGATCGAGAATCTTACACCTCGATGTGAAGCCGGAAAACATCCTCCTCGATGAAAATTACAGAGCAATCGTATCGGATTTCGGATTGTCGAAACTGATGGGGAAAGACGAGAGCCGAATAATGATATCCATGAGAGGGACGAGGGGATATTTAGCTCCGGAATGGCTATTGGAGAACGGAATTTCAGAGAAATCCGACGTTTACAGCTACGGAATGGTTCTTCTGGAACTCGTCGGAGGTCAGAGAAACGTGAGCGTAGTTGAAAATGGAGAAGACAGATCTAAGAGGAAATGGCAGTATTTTCCTCGAATCGTGAGTGCGAAGATGAAGGAAGGAAAATTAATGGAAGCTGTAGATAAAAGGCTCCTGGAAACGGGGACGATCGATGAAAGAGAGGTACGGAAACTGGTTTGTGTGGGTTTATGGTGTATACAAGAGACGGCGAAGCTGAGGCCGACGATGGCGACGGTTGTGGATATGCTTGAAGGCCGCATCACGGTGGAGGAGCCGCCGGATACTGAAATGCTCGTCGTTGATTTGTTGTCTATTAATGAAGAGATGATGGATAGCCATGAGAGGCCGAAGATTGTTCCGTTTGTGGAGAGGATGAACGATAGAAACCTTCCTTCGTCTTCGACGACGTCGTGTTCGTACGCCTTCTCTGTACTCTCCGCTCGATGAGGTAAGGCCGTCGGCGATGGCGACGGCGGACGGAGGCCGGCCGTCTCTCTCCCTTTGACTTTTGTGCCCTAACGGCCTAACCACAGTACTGAAATTGCATACGTCGTCTTCTTTTTATTCTCAATTTATTTTTTTTCTTTTTTCGGCAATTATTTTAAAGATTTGATGAATGAAATATAATTATTTTTTGGTCCCAAA 1756 44.99 MEDKKANIIALSLILSLILLLILARVFLKLSKSFFLICGIDVSLTAAILVYMIIRLRFNRRRKQLESQLVSEGRELRIEYSFLRKVAGVPTKFRYKELEEATDYFRALIGRGSSGSVFKGILKDGTAVAVKRIEGENRGDKEFRAEVSAIASVQHINLVRLIGYCTNSSGPRFLVYEFVSNGSLDCWIFPKKPKHKNRNRPGGCLAWDLRYRVAIDVAKALAYLHHDCRSRILHLDVKPENILLDENYRAIVSDFGLSKLMGKDESRIMISMRGTRGYLAPEWLLENGISEKSDVYSYGMVLLELVGGQRNVSVVENGEDRSKRKWQYFPRIVSAKMKEGKLMEAVDKRLLETGTIDEREVRKLVCVGLWCIQETAKLRPTMATVVDMLEGRITVEEPPDTEMLVVDLLSINEEMMDSHERPKIVPFVERMNDRNLPSSSTTSCSYAFSVLSAR 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23390384 23392139 - XM_039024718.1 Bhi02g01038 27560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01038 454 SUPERFAMILY Protein kinase-like (PK-like) 85 390 IPR011009 -
Bhi02g01038 454 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 454 - -
Bhi02g01038 454 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Bhi02g01038 454 Gene3D Transferase(Phosphotransferase) domain 1 179 405 - -
Bhi02g01038 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Bhi02g01038 454 SMART serkin_6 103 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi02g01038 454 Pfam Protein kinase domain 108 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi02g01038 454 ProSiteProfiles Protein kinase domain profile. 103 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi02g01038 454 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Bhi02g01038 454 PANTHER RECEPTOR-LIKE KINASE 1 454 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01038 Bhi-Chr2:23390384 Bhi09g02237 Bhi-Chr9:62967434 1.94E-98 dispersed
Bhi02g01038 Bhi-Chr2:23390384 Bhi04g00947 Bhi-Chr4:24104491 2.64E-103 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87464 PF00069 Pkinase 1.90E-43 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01038 - - csv:101211041 800.045