Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01183 AAGAACGTAAGCCTTTCTTGCTCGTCTTCTTGTTCTGTCCATTCGTACTGTATACAAATAATCATTATTGCATAGCCCTAGGCGTCGTCTCTTTTAGTTTTCCTTCTCGTCGGCTATCCTCGAGCATCAAACTGCTTATGATTTCAGGTACTAGAGGTCAGCTTTGGCGTAGAAGTTTTTCTTTCAGTTCCGAATTTGCATATTTTTGTGCATGATCTTTACCGCTGCTTTTGGACTGTGATTCATGCCTGAAATTCAGAAGATTGAGTTGATTTTCATGAGTTTGAATTATTGGTAGCGAATATGCGGATTGAGGAAGTTTTTGAAAAAGATTTGAAAATTGCTGGTTAGAGGTTTGATATTTGAAATTCAAATTGAATGGGTGAAGTTGGGAATCGAGATATGGATAACTTACCCCTGTTAAATGCACAAACTGATAGTGCGGAACCGGGTAATGTTGTTTCATCTGATGTTCCTTCTAAGAAACTAGCTAGGCAGCTGGATTTTACGGGGTCTGTTGGTGCAGTCTTGCCGGAGCATCCTCATTTTCAGTCTCAGCCTCGGTGTCAACAATCAGAGTCGCCGGCCGTCATGGTGGTGCAGAGTCAGTCGCAGCCACAGTCCCCACAACATTTGATGGTTTTGCCCATTGTAACAAAAGCGCCTCATCCTGCGAGAAAGCCAGATTCCCCGAAGTCAAGATCAAGATCTAATGTTGAAACAAAAGATGCTACTCCAAAAAAACAAAAACAGTGTAACTGCAAACACTCACGCTGCTTAAAGCTGTACTGCGAGTGTTTTGCATCCGGAATATACTGTGATGGTTGCAATTGCACAAATTGCCATAACAATGTTGAGAATGAAGCTTCTAGGAGAGAAGCAGTCGAAACTACTTTAGAACGTAATCCAAATGCATTCCGACCAAAGATTGCTAGCAGCCCACATGGAACACGAGAGAGCAGGGATGAAATTGGAGAGGTAGTAATGCTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAGGTTGCTTAAAGAAGTATTGTGAGTGCTTTCAGGCCAATATTCTATGCTCTGAAAACTGTAAGTGCATGGACTGTAAGAATTTTGAAGGCAGTGAAGAGAGACAAGCTCTTTTCCATGGTGACCATGTCAACAACATGGCTTCTATTCAACAGGCAGCCAATGCTGCAATAACTGGAGCTATTGGATCCTCTGGTTATGCTTGCCTTCCCACTTCAAAGAAAAGAAAAGGCCCAGAGCTATGCTTTGGCCCTGTAGGGAAGGATTCCCCTCTCAACAGTATGCCACAATTTCATCAGGCAAATAATATAATGGCTTCAGGCACGTTTACATCATCTCCCTTCCCAGTTGCTCATGTTGGTAGCCCTGCGGCACCGGGACCTTCAAAGTTCTCATTCAGGTCCTTATTAGCTGACCTCATCCAGCCGCATGACTTGAAGGAGCTTTGCTCAGTTTTAGTGGTGTTGTCAAGTGAAGTTGCAAAGAACCTAGCAGAGCATAGAAATACTGTGAAACAGATAAATGACCGGCCACAGATTTTTCGTGCTTCATCAACTGGAGATATGTCACAGCGTCAGAAGGCCGAAGTGAAAGCTGCAGATGGTGAGTGTGGTAGTTCAAACCAAAGTGAAAGGAGTGTACATGACAATTCTAATTCAGATAGTTCGAATACAACACGGGCAAGGCCGATGTCCCCTGGAACTTTAGCTTTAATGTGTGATGAAGGAGATACAATGTTCATGGGAGCTGGTCTAGCTGATGGGTTGGCAGGCCATGATTGCAACACATCATCACATGTGCCTGATAAGTCTTTGTCAGAAGTCTACATCGAGCAGGAACGGATTGTGTTGACAAAGTTTCGAGATTGTCTTAATAAACTCATCACTCTGGGAGAGATAAAAGAAACAAAATTCACTTCTAGAAGCGAATTGGGGAACGAACATCACAGCAACAATTTCACCTCAAATAGTGGGTGCCAACAGAGATCTATTAGCAATGGGGTCGTAAAAAATGTCGCTCTCTCAGCACCTAGAATACCACCAGTCGGCACTGCAGCTCATCATCCGAATAACGATCTCGTACCCAATATTCTACCCCTTTCTAAAAATAGGAAGAATAAACCACAAGTTGACAGAGAAGTGTAGGAAAAGCCGAAGAAAGCAACTGGCGTGTTGCTCAATCTCATTGATCATTCAGATTTGCTTCCTGAGACTGGTCTATTCAAGTTAGTTGCCCCATTTTGACGTATATTATTGGTTTTTATATCATCATTAGAATTCTAGGAGAATTTTGTGTTCCAAATTCCATTCGTAGATAGAGATCTTGTAATTGCTAAATCATTGTACGAGATAGATAACAAAGAGCAATAATTCATCCCTTTTTTTCTTTTTAGGAAATAATTCATCCCATTTGATGACCAATGAAATAAAAGATTAGCATCATTATGCATTTTTGTTCA 2483 41.84 MGEVGNRDMDNLPLLNAQTDSAEPGNVVSSDVPSKKLARQLDFTGSVGAVLPEHPHFQSQPRCQQSESPAVMVVQSQSQPQSPQHLMVLPIVTKAPHPARKPDSPKSRSRSNVETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCTNCHNNVENEASRREAVETTLERNPNAFRPKIASSPHGTRESRDEIGEVVMLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHVNNMASIQQAANAAITGAIGSSGYACLPTSKKRKGPELCFGPVGKDSPLNSMPQFHQANNIMASGTFTSSPFPVAHVGSPAAPGPSKFSFRSLLADLIQPHDLKELCSVLVVLSSEVAKNLAEHRNTVKQINDRPQIFRASSTGDMSQRQKAEVKAADGECGSSNQSERSVHDNSNSDSSNTTRARPMSPGTLALMCDEGDTMFMGAGLADGLAGHDCNTSSHVPDKSLSEVYIEQERIVLTKFRDCLNKLITLGEIKETKFTSRSELGNEHHSNNFTSNSGCQQRSISNGVVKNVALSAPRIPPVGTAAHHPNNDLVPNILPLSKNRKNKPQVDREV 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27810723 27816717 + XM_039024674.1 Bhi02g01183 27705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01183 596 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 29 91 - -
Bhi02g01183 596 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 59 537 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 12 28 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 418 446 - -
Bhi02g01183 596 SMART CXC_2 206 247 IPR033467 -
Bhi02g01183 596 SMART CXC_2 121 161 IPR033467 -
Bhi02g01183 596 PANTHER TESMIN/TSO1-RELATED 59 537 IPR028307 -
Bhi02g01183 596 PANTHER TESMIN/TSO1-RELATED 29 91 IPR028307 -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 390 451 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 1 33 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 58 83 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 95 121 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 523 543 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 562 596 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 50 83 - -
Bhi02g01183 596 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 123 158 IPR005172 -
Bhi02g01183 596 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 209 243 IPR005172 -
Bhi02g01183 596 ProSiteProfiles CRC domain profile. 122 246 IPR005172 -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 390 407 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 99 121 - -
Bhi02g01183 596 MobiDBLite consensus disorder prediction 527 543 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00774 Bhi-Chr1:14648782 Bhi02g01183 Bhi-Chr2:27810723 3.96E-31 dispersed
Bhi02g01183 Bhi-Chr2:27810723 Bhi06g02018 Bhi-Chr6:55344757 0 dispersed
Bhi02g01183 Bhi-Chr2:27810723 Bhi12g01691 Bhi-Chr12:54742349 6.28E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
445 PF03638 TCR 3.20E-12 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01183 - - csv:101222405 991.49