Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01202 CGTGTAGGGGTGACTTATTACTTAACTTCTTATGCACAAATACCCCACCTTTCTCTCTCTATCTCTCTCTCTCTCTAAAATCAAACAATTTTTTTCCTTCCATTTCCAAAAATATGGAGAATGAGTCTATAATTCTGAACTCATCGCAGCCGCAATCGCCGTCGTCGTCGGGAAGTTTATCGACAGTTCCCGATCATCAACCGTCGTCGTCGGCGGCGGCGGTCGACTCGAACCGGAAACGAGCCAAGCGGCCGAGGGAAAATAGCAACAATAACAATAGCAAACACCCGGTTTTCCGTGGGGTCCGAATGAGAGCATGGGGAAAATGGGTTTCCGAAATTCGTGAACCACGAAAGAAAAGCCGGATCTGGCTCGGCACTTTCTCCACCCCTGAAATGGCCGCACGTGCTCACGACGTCGCCGCCCTCACCATTAAAGGCACCGCCGCCATTCTCAACTTCCCTGAACTCGCCCATCATTTCCCCCGCCCTGCTTCCACCTCCCCCCGTGACGTTCAGGCCGCCGCCGCTAAAGCCGCCTCCATGGAAATCCCAACTCCGCCGCTTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCTTCCGCCGTCTTATGTCCATCCACGCCGGAGGAACTGAGTGAAATCGTTGAACTCCCGAGTTTAGGAACGAGTTACGAAACAGCCGAGTTAGGAAACGAGTTCGTATTCGTCGACTCAGTGGAAGGTTGGCTTTATTCTTACCCATGGTATAACAGAGTCAATAATGCAGATCATCAAGTACAAGAAGATTATGATTTCTTCAAAGAACAGATTTTAATGGCGGATTATACAGACACTTTAATTCCAAATTCAGCTTTTGAAGCTTTCTTATGGCCAAATTAATTTATTAATTAAAACCAACCCCATTTCCCCTCATTGTGTGATTTTTCTTCCTCTTTCTCCATAAATTTTGCTTGTAAAACAAAACCTTTTCTATTTTTCTATCCAAATTTCAAATCCTCCCCTGTTTTTTTTTTTTAAACCCATTGATTTTGTGAATCTAAGAGAGGGCCCCCCAAGCTAAATACAGTCATTTTAGTTGTTAATTAGTGAGTAATGTTTGATTAATAATATAAGGATTTGGGTTTTGAGGCAGAACTATTCCCTAATGTTCATATAATTTTATTTTATTTTATTTTATTTTTTCCTTTTTGAGAGTGTAATATTTGTTTGTGCTCTAATTATGCAGATGATAGCTCCTCTATTTTTTGTCCTTTAA 1263 42.83 MENESIILNSSQPQSPSSSGSLSTVPDHQPSSSAAAVDSNRKRAKRPRENSNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTAAILNFPELAHHFPRPASTSPRDVQAAAAKAASMEIPTPPLSSSSSSSSSSSSSSAVLCPSTPEELSEIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVNNADHQVQEDYDFFKEQILMADYTDTLIPNSAFEAFLWPN 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28213831 28215093 + XM_039022760.1 Bhi02g01202 27724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01202 257 Gene3D AP2/ERF domain 60 118 IPR036955 GO:0003700|GO:0006355
Bhi02g01202 257 MobiDBLite consensus disorder prediction 1 62 - -
Bhi02g01202 257 MobiDBLite consensus disorder prediction 1 38 - -
Bhi02g01202 257 CDD AP2 61 119 IPR001471 GO:0003700|GO:0006355
Bhi02g01202 257 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 12 241 - -
Bhi02g01202 257 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Bhi02g01202 257 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Bhi02g01202 257 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 241 - -
Bhi02g01202 257 SUPERFAMILY DNA-binding domain 60 118 IPR016177 GO:0003677
Bhi02g01202 257 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Bhi02g01202 257 MobiDBLite consensus disorder prediction 147 169 - -
Bhi02g01202 257 MobiDBLite consensus disorder prediction 124 169 - -
Bhi02g01202 257 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Bhi02g01202 257 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01202 Bhi-Chr2:28213831 Bhi04g00846 Bhi-Chr4:21311079 4.25E-61 dispersed
Bhi12g02208 Bhi-Chr12:70602665 Bhi02g01202 Bhi-Chr2:28213831 4.29E-42 transposed
Bhi02g01202 Bhi-Chr2:28213831 Bhi06g02000 Bhi-Chr6:54954420 4.41E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
446 PF00847 AP2 3.00E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01202 K09286 - csv:101219745 384.03