Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01339 GCCTCCGTTTTGGTTTTGGAGTTCTTGATGGGAGTCCTAAACACCTTCGAGATTTTGCTATATATACATTAGATTTTCGATTCATCGCTAAGTTTTCGCAGATTCCCCTTCTTCTCTTCCCCGATTCTCTGCAATTTTTCTGTTCTTCAATCCATCAATCCTTCACAATAATGAGGCTCCAAGTCGCCGACGACGATCTCGACGCCATTCTTCTTCCTCCGCCGAACTTCTCCATGGTTGAGGACGGCATTTTCCGATCCGGCTTCCCTCAACCCGCCAATTTCCCCTTCCTCCGCAGCCTCAATCTCCGCTCCATCATATATTTGTGTCCTGAACCCTACCCTGAGGAGAATTTGGAGTTTCTTAAAGCTAATAATATCAAGCTTTTTCAATTCAAAATTGAAGGCAAAAAGGAGCCTTTCGTTTCGATTCCGAAGGATGCTATTCTTGAGGCTCTAAAAATACTAATTGATGTTAGGAATCACCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTCGTGGGTTGCCTGAGGAAGTTTCAGAACTGGTGTTTGACTTCGGTGTTCGAAGAGTACCAGCGATTTGCAGGCATGAAATCGAGGGTGACGGATCTACAATTCATCGAGACATTCGACATTGCGTCTCTGAGGCAATGTGTTTACAGCATCATATATCAGTACCAAGGTTATAGCTCAAACAAGAGGAGGCTGTTGTATAGAGAAGAAAACTTGCAAAAGCCTCAAACAACATCAGTTTAGAAGAAAATTTCAATCCATACAAGAACTCAACCTTCTTTAATGCACATAATATCAAGTTCTTGTCAAACCATCAAGTCTATGGTTCCCCATTTTTTGGGTCCCATTGATTGCTCAGATCCTATTTTTTTTTCCCTTTTTTCTTTTTTTGTTTTATCATTTTTTTTTGCTTTTTTCTTATTCATAAGAAATTAAAAAAAGGAAAAAGAAGGAAAAAGAATAGCAAACTTTATGGAAACTATTATTTCCTTAGTCATAGAAGTTCAAGAATAGCTTCATCTGATTGATTGTTTTTTTATGTATAGTTTCATTGGATACTTGTTATTTACTGAGAATCATATATTTAGATTATTATTTTTTTTTACAA 1137 38.43 MRLQVADDDLDAILLPPPNFSMVEDGIFRSGFPQPANFPFLRSLNLRSIIYLCPEPYPEENLEFLKANNIKLFQFKIEGKKEPFVSIPKDAILEALKILIDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRFAGMKSRVTDLQFIETFDIASLRQCVYSIIYQYQGYSSNKRRLLYREENLQKPQTTSV 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33532619 33534707 - XM_039023779.1 Bhi02g01339 27861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01339 200 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791
Bhi02g01339 200 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791
Bhi02g01339 200 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791
Bhi02g01339 200 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Bhi02g01339 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 160 IPR029021 -
Bhi02g01339 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 170 IPR020422 GO:0006470|GO:0008138
Bhi02g01339 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 109 119 IPR016130 GO:0016311|GO:0016791
Bhi02g01339 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 183 - -
Bhi02g01339 200 Gene3D Protein tyrosine phosphatase superfamily 13 163 IPR029021 -
Bhi02g01339 200 Pfam Tyrosine phosphatase family 14 163 IPR004861 -
Bhi02g01339 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 10 183 - -
Bhi02g01339 200 CDD PFA-DSP_Siw14 14 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01339 Bhi-Chr2:33532619 Bhi05g02097 Bhi-Chr5:63867596 5.89E-77 dispersed
Bhi02g01339 Bhi-Chr2:33532619 Bhi10g01060 Bhi-Chr10:21444321 1.73E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01339 K18045 - csv:101211082 374.785