Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01538 TCTTCCTACTCAGAATTTTTCATTTTTGGAATTCACCAAAAGGGATTAAATTTCAATCTCCCTCTTTTTCTTTTTCTACTTTTTTTTCTCTTTAAATTATTATTATTATTTTTGAATTCTCTCCGATTTCTCTTCTCCCCCATCAGATTTTTCCCTTTTCTCCATTTGGACGTTGCTCCAATTTCTAACGGGTCTGAAGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGATCCAAATGGTGCTCCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCGTTACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTCTCATCCACTTTGCCAGCAATGCACGGTGAATGTCTGACACAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCTTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTATGGTCATCAGCCCTTGGGCTATCCTATGGTCGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTTGTGAACGCAAAGCAATACCAGGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATAAGAAGGTCAAGGAGTAGTGGAGGGCGTTTTGCAAAGAAAAATGAAGTTGATGGAAAGGATAAAGTAAATGAGAGTGGTTACCGCCTAAATGAGGGTTCGGAACAGCAGAATGGAAGCTCCTTGACGAACAGGGCCTCCGAGTAGCAGCATGCATCAGCCACTGGAGGTGAATGCCAAGACAATGGCCAAAATTGGTTGATGGGGAGGGATTGATTGCTTGTTTGTTAAAAGTATTCCTGGCCACAACACGCCAGGCGGCAAATCATTCTTGGCTTTGTTCTGTTGTTCTGAAGAAAAAGAAAAAGGAATGTAGAATGATATTTGACTTACAGGATCTCATGGCTTCAAAGGATTCCTCAAAGTCCAAGAGATTTCTTCATTCCATTCTCTTTTTTTGCCTTTTTGTACAGAGTTTATGATGACTTAAGGGAGTGGAAACTTTGACCTCTTGTATTATATAGCAGAGTGGAAACTAAATGAATCATAAAGCTTAGGATAGATATAGAGATTGTGATGCACAAAGCTTAAGCTTGAAAGATTTTAAATTTGAATATCCAAGGTCGACAGGTTATTGATGCAAATTATTATTTTCTGGTAAAAAAAATAGATGGAGTTTGTCTTCCTTTAGCTTT 1487 41.02 MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEVDGKDKVNESGYRLNEGSEQQNGSSLTNRASE 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42083024 42088238 - XM_039023396.1 Bhi02g01538 28060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01538 265 ProSiteProfiles NF-YA/HAP2 family profile. 171 231 IPR001289 GO:0003700|GO:0006355
Bhi02g01538 265 PRINTS CCAAT-binding transcription factor subunit B signature 174 196 IPR001289 GO:0003700|GO:0006355
Bhi02g01538 265 PRINTS CCAAT-binding transcription factor subunit B signature 205 228 IPR001289 GO:0003700|GO:0006355
Bhi02g01538 265 MobiDBLite consensus disorder prediction 226 245 - -
Bhi02g01538 265 MobiDBLite consensus disorder prediction 206 225 - -
Bhi02g01538 265 MobiDBLite consensus disorder prediction 246 265 - -
Bhi02g01538 265 MobiDBLite consensus disorder prediction 196 265 - -
Bhi02g01538 265 MobiDBLite consensus disorder prediction 82 102 - -
Bhi02g01538 265 MobiDBLite consensus disorder prediction 39 67 - -
Bhi02g01538 265 ProSitePatterns NF-YA/HAP2 subunit signature. 176 196 IPR018362 GO:0003677|GO:0016602
Bhi02g01538 265 SMART cbf3 170 231 IPR001289 GO:0003700|GO:0006355
Bhi02g01538 265 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 32 255 IPR001289 GO:0003700|GO:0006355
Bhi02g01538 265 MobiDBLite consensus disorder prediction 1 22 - -
Bhi02g01538 265 MobiDBLite consensus disorder prediction 1 17 - -
Bhi02g01538 265 Gene3D - 171 233 - -
Bhi02g01538 265 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 32 255 - -
Bhi02g01538 265 MobiDBLite consensus disorder prediction 37 102 - -
Bhi02g01538 265 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 174 228 IPR001289 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g01538 Bhi10g00303 CCT
Bhi02g01538 Bhi10g00303 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01538 Bhi-Chr2:42083024 Bhi10g00303 Bhi-Chr10:6542622 7.82E-94 dispersed
Bhi02g01538 Bhi-Chr2:42083024 Bhi10g00302 Bhi-Chr10:6542622 7.82E-94 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
465 PF02045 CBFB_NFYA 3.90E-25 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01538 K08064 - csv:101212860 489.189