Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01666 ACCCCTTCAAAGTTCAGTCCCCACCATCGCCATTTTTCACCAATGCTCTCTCACCTTTCACAGTCACCAAGGGACCGACTCTTCTTTTTTATCTCACATGAAAGTTGAAACCTTTCCACTTCCACCCCCAACTTTTTCTTATTGGATTACATTATCATCCCCTTCTCCTTCCCCCCCTTTCTTTTTCTCTCTCAACAAATTTGCTTCCTGGGTTTCTTTCCCTCTGGATTGACTTCCAGTTTCTAGCTTCAAGACCCAATTCTTATCTCTCTCTTGTTCTTCAGGTGAGGAAGCATAGAGAATTTTAGTAGCTTCCGTATCATATCTCATACTAAGGTAAAAGGCAGTAGCAGATTAGGATTTTTTTTGGTGTAAATCTGATTTTTGGATCTCGCCTGAGTTTCATCGTCTGAATTTGGTGAATATCTGCTGATTCATTTTTGTGGGGAATGATGATGATGTTCAATGAGATGGGATTTTGTGATGATATGGATTTCCTTTCTGCTCCAATTGTGGAAGGAGATGCCATAGCTCCACCAGCCGATCCTGAAGTCGTGGTGGAAGATGATTATTCTGATGAAGAGATCGACGTCGATGAGCTTGAGAGGAGGATGTGGAGGGATAAGATGCGTCTCAAACGCCTTAAAGAGCAAAGCAAGGTTAAGGAAGGGATCGATATTGTGAAACAGCGACAGTCTCAAGACCAGGCTAGGAGGAAGAAGATGTCGAGGGCACATGATGGGATCTTGAAGTATATGTTGAAGATTATTGAAGTTTGTAATGCCCAAGGTTTTGTATATGGAATAATTCCTGAGAAGGGAAAACCAGTAACTGGGGCATCGGATAATCTGCGAGAATGGTGGAAAGACAAGGTCAGATTTGATAGAAACGGACCAGCTGCCATAGCCAAGTACCAGGCAGACAATGCAATTCCAGGACGAAATGATGGATGTAATTCGATCGGTCCAACCCCGCACACCTTGCAGGAACTTCAGGATACCACCCTAGGATCTCTTTTATCAGCTCTGATGCAGCACTGTGACCCTCCTCAACGAAGATTTCCATTGGAGAAAGGTGTTCCCCCACCATGGTGGCCTACTGGAGTCGAGGAATGGTGGCCTCAGCTCGGGTTGCCGAAGGACCAAGGTCCTCCACCTTACAAGAAGCCTCACGACTTGAAGAAGGCGTGGAAAGTCGGTGTTTTGACTGCGGTCATCAAGCATATGTCCCCTGATATAGCCAAGATCCGCAAGCTTGTTAGACAGTCCAAGTGTTTGCAGGACAAAATGACTGCCAAGGAGAGTGCTACATGGCTTGCTATTATCAACCAGGAGGAGATCTTGGCTCGGGAGCTTTATCCCGACTCTTGCCCCCCTTTGTCTTCTGGTGGGGGTAGTGGATCGTTGGTCATTAATGATTGCAGTGAATACGATGTAGAAGGCGCTGAGGAGGAACCAAGCTTTGATGTTCAAGACCGTAAACCTGATAACCATAGCTCATTCAACTTGGGAATGGACAGAATGAGAGAACGGGTGTCCCTTCGACAACCATCTTATGCAATCAAAGGAGAGGTTCCCACAAACTTGGATTTTATGCGAAAGAGGAAACCGACCAGCGATTTGAACATGATGATGGATCAGAAAATCTATACTTGTGAATTCCTCCAGTGTCCTTATAGTGAACTTCGTCTCGGGTTTAATGACAGGACGTCCAGAGACAATCATCAGTTGACCTGCCCATATAGAACTTCTTCAGAATTCAGTGGCTCAAGTTTTCACGTCAACGAGGTCAAACCAGTTATCTTCCCTCAGTCGTTCGCCCCGCCCAAGTCAGCTCCACCACCGGTCAGCTCAGTTCCACCTTCCTTTGACCTGTCCACTTTAGGCGTTCCAGAAGATGGCCAAAAGCTGATCAGTGAACTCATGTCGATCTATGACACCAACATCCAAGGCAACAAGAACAACTTAAACACCGGTAGCAGTGCCATCACGGAGAACCAAAATCTTCCTCAGTTGAAGATCCAACCTCAACAAGATGAATACTTCCGCAATCAAGGTCTAATGATCGAGGGAAACTTCTTTGAGGGACCGAATGTTTCAAGCAGCCATCAAATGTTCACAAGAGATGAAGGCCAATTCGACCGGTTTAAGCCAGTGAATTCACCTTTCGAAAACAACCACCATCAGCACAACAATAACAACAACAACTTCCACTTGATGTTTAGCTCTTCATTTGATTTGTCGACCTTCGACTACAAAGAAGAAGTACCTGGAGTAGCAGCCATCGATACACTGGCGAAACAGCAAGACATTCCATTATGGTATCATTGAGCACGCTCTCACTCCGATGCTTTATTGATGAATTCTTTCCGTCGAAAGCAGCAGCAGCAGCAGTAACAGCAGCTGCAGCAGCAGTGAAATTCATAGCAGTTCTTTTTACAGTTTGAGTATCTCTCTCTCTCTCTTATGGGGTTTGCCTTTTACTTTTACTAGGAACCAGTCAAAGTTACCTTTTGGGGTTTGGCCTAACTTGGTGAAACTATGAAATTGTGTTGTCTAAAAAGAAATGTTCGGTGATGCATCCTACTGGTCATTCACACAAATGGATGGATAATGTCATTAGCTTGTAGAATATCTTTTTAAGGTCATCATGTAATGTAAGTCTTAAGTTTCTCCAATAGACTGATAAATAAGTGGAGAGAATCCTTTTAGTATTACTGCTACTACTTACCCTGCCCTGTTGTTGATTACATATCCAAATGATTGTCTATATGAAATAACTATTTCAACAA 2791 44.07 MMMMFNEMGFCDDMDFLSAPIVEGDAIAPPADPEVVVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKVKEGIDIVKQRQSQDQARRKKMSRAHDGILKYMLKIIEVCNAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGVEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEILARELYPDSCPPLSSGGGSGSLVINDCSEYDVEGAEEEPSFDVQDRKPDNHSSFNLGMDRMRERVSLRQPSYAIKGEVPTNLDFMRKRKPTSDLNMMMDQKIYTCEFLQCPYSELRLGFNDRTSRDNHQLTCPYRTSSEFSGSSFHVNEVKPVIFPQSFAPPKSAPPPVSSVPPSFDLSTLGVPEDGQKLISELMSIYDTNIQGNKNNLNTGSSAITENQNLPQLKIQPQQDEYFRNQGLMIEGNFFEGPNVSSSHQMFTRDEGQFDRFKPVNSPFENNHHQHNNNNNNFHLMFSSSFDLSTFDYKEEVPGVAAIDTLAKQQDIPLWYH 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45817744 45821321 - XM_039022683.1 Bhi02g01666 28188

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01666 626 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Bhi02g01666 626 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 625 IPR006957 GO:0005634
Bhi02g01666 626 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 625 - -
Bhi02g01666 626 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Bhi02g01666 626 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Bhi02g01666 626 Coils Coil 48 68 - -
Bhi02g01666 626 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01666 K14514 EIN3; ethylene-insensitive protein 3 - csv:101206055 1149.81
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01666 Bhi-Chr2:45817744 Bhi04g01649 Bhi-Chr4:40712738 0 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi02g01666 . 2 625 EIL Transcription Factor Family AT2G27050 59.0 1.3e-191 667.2
Bhi04g01652 . 8 507 EIL Transcription Factor Family AT2G27050 61.7 2.0e-168 590.1
Bhi04g01655 . 8 507 EIL Transcription Factor Family AT2G27050 61.7 2.0e-168 590.1
Bhi04g01656 . 8 507 EIL Transcription Factor Family AT2G27050 61.7 2.0e-168 590.1
Bhi04g01653 . 8 507 EIL Transcription Factor Family AT2G27050 61.7 2.0e-168 590.1
Bhi04g01650 . 8 507 EIL Transcription Factor Family AT2G27050 61.7 2.0e-168 590.1
Bhi04g01649 . 8 507 EIL Transcription Factor Family AT2G27050 61.7 2.0e-168 590.1
Bhi04g01654 . 8 507 EIL Transcription Factor Family AT2G27050 61.7 2.0e-168 590.1
Bhi04g01651 . 8 507 EIL Transcription Factor Family AT2G27050 61.7 2.0e-168 590.1
Bhi02g01563 . 44 326 EIL Transcription Factor Family AT2G27050 62.2 7.7e-96 349.0
Bhi02g01563 . 44 577 EIL Transcription Factor Family AT1G73730 54.9 4.1e-147 519.2
Bhi02g01666 . 36 334 EIL Transcription Factor Family AT1G73730 62.2 3.3e-104 376.7
Bhi04g01652 . 40 335 EIL Transcription Factor Family AT1G73730 61.0 1.1e-102 371.7
Bhi04g01655 . 40 335 EIL Transcription Factor Family AT1G73730 61.0 1.1e-102 371.7
Bhi04g01656 . 40 335 EIL Transcription Factor Family AT1G73730 61.0 1.1e-102 371.7
Bhi04g01653 . 40 335 EIL Transcription Factor Family AT1G73730 61.0 1.1e-102 371.7
Bhi04g01650 . 40 335 EIL Transcription Factor Family AT1G73730 61.0 1.1e-102 371.7
Bhi04g01649 . 40 335 EIL Transcription Factor Family AT1G73730 61.0 1.1e-102 371.7
Bhi04g01654 . 40 335 EIL Transcription Factor Family AT1G73730 61.0 1.1e-102 371.7
Bhi04g01651 . 40 335 EIL Transcription Factor Family AT1G73730 61.0 1.1e-102 371.7
Bhi01g02483 . 17 269 EIL Transcription Factor Family AT1G73730 53.8 7.1e-75 279.3
Bhi02g01666 . 3 625 EIL Transcription Factor Family AT3G20770 60.1 1.4e-207 720.3
Bhi04g01652 . 7 505 EIL Transcription Factor Family AT3G20770 64.0 3.5e-171 599.4
Bhi04g01655 . 7 505 EIL Transcription Factor Family AT3G20770 64.0 3.5e-171 599.4
Bhi04g01656 . 7 505 EIL Transcription Factor Family AT3G20770 64.0 3.5e-171 599.4
Bhi04g01653 . 7 505 EIL Transcription Factor Family AT3G20770 64.0 3.5e-171 599.4
Bhi04g01650 . 7 505 EIL Transcription Factor Family AT3G20770 64.0 3.5e-171 599.4
Bhi04g01649 . 7 505 EIL Transcription Factor Family AT3G20770 64.0 3.5e-171 599.4
Bhi04g01654 . 7 505 EIL Transcription Factor Family AT3G20770 64.0 3.5e-171 599.4
Bhi04g01651 . 7 505 EIL Transcription Factor Family AT3G20770 64.0 3.5e-171 599.4
Bhi02g01563 . 44 292 EIL Transcription Factor Family AT3G20770 69.3 3.0e-98 357.1
Bhi02g01563 . 83 288 EIL Transcription Factor Family AT5G65100 59.3 9.0e-70 262.3
Bhi01g02483 . 12 348 EIL Transcription Factor Family AT5G10120 58.0 5.2e-103 372.5
Bhi02g01563 . 44 290 EIL Transcription Factor Family AT5G10120 55.2 1.3e-72 271.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001004 3 9 2 2 3 2 4 2 2 1 2 2 4 2 2 4 2 6 4 2 2 2 2 2 2 2 2 3 4 2 83
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
476 PF04873 EIN3 2.70E-128 No_clan Bhi TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g01666 Bhi_Chr02 FPKM 14.919726 15.211163 25.587559 26.15102 14.369493 11.477142 14.63539 46.758251 47.069035 48.276966