Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01932 GTATGGCGGTGGTTTTGGCAAGGAGTGTTGTCTGGAAAAACTGTAACCGTAACCCACCACCGTCTTCTCCGGCACAGACGATATGTTAATCAGTGAACGCCACCGCCCTGGTCCAGTGGTTCACATCACTCCATTGACGATACCGGAGGAACCTCCTGCAAGCGAGACGCGGTTTCCTTTTCCCCTGAGTGGAATCTCGGTGAGTTCTGATGTTACTGCCAATGGCGGCGATTATTCTCCCTATTATCTCCAGGAAGCCCTAGCGGCACTCCAGCGATATACGAATGAATCGGAGATTGAATCTGATTCGGAGTTGTCCGGACGGGAATCGGACGTTCCGGTGGGTGCTTACTCGGGCGATCATTTTCGGATTTTTGAGTTCAAGGTGAGGAAGTGTACGCGTGGACGGTCTCATGATTGGACGGAGTGTCCGTATGCTCATCCAGGCGAGAAGGCCCGCCGGAGAGATCCGAGGAAGTATCATTACTCTGGTACGGCATGCCCTGACTTTCGAAAAGGTAGCTGTAAGAAAGGCGATTCATGCGAGTTTGCGCATGGTGTTTTTGAGTGTTGGCTTCATCCTGCTCGTTACAGGACTCAGCCGTGTAAGGATGGGACTAACTGTCGGCGGAGAGTCTGTTTCTTCGCTCATACTCCTGAACAACTTAGGGTTTTGCCTCAACAGAGCCCGAGAAGCGCGAACTCGCCTGAGTCGTATGATGAATCTCCTATTCGGCAGTCTTTGGATGGATCCTGTGCTAAATCGTTGCCGTTTCTGTCTTCTCCGGTGTCCGTTTCACCGTCCGCGACTCCGGTGGACTCCCCACCGTTATCGCCCATGACTCGGTCTCTCGGCCGGTCCCTTGGCTCGAGTTCCATCAATGAAATGGTCGCATCCCTCCGTAACTTGCATCTAAGCAAGGTCAAATCCCTGCCATCCTCCTGGAATATTCAAATTGGATCTCCTGGTTATCCATCTCGAATCTGCCATGGATTTTGTAGCCTTCCAACAACTCCAACTCGGGCTCCAACTGGTCATGGAGGACTGCTCGACTTCTCGGAGCATGGATTCGAGGAGGAACCGGCGATGGAGCGAGTCGAATCTGGGAGGGAGCTGAGAGCAAAGATGCTGGAGAAGCTGAGCAAGGAAAATTCTCTGGACTTGGCTGATTCAAATCCTTCAACCTGCACACCAGACGTTGGATGGGTATCAGAGCTAGTGAAGACAAAGTTGAATGTTCGGGATGGTCGGAATATTTTTTAATAATAGAAGTTTGGTTCATAGTTGACTCTTATTACGTAATACTAGATGTTCAATAACTTTGTTATTATGTATTGTATTAATGTTATACCTTGTATGGATGTGTGGATTCATGGATA 1380 49.78 MLISERHRPGPVVHITPLTIPEEPPASETRFPFPLSGISVSSDVTANGGDYSPYYLQEALAALQRYTNESEIESDSELSGRESDVPVGAYSGDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCFFAHTPEQLRVLPQQSPRSANSPESYDESPIRQSLDGSCAKSLPFLSSPVSVSPSATPVDSPPLSPMTRSLGRSLGSSSINEMVASLRNLHLSKVKSLPSSWNIQIGSPGYPSRICHGFCSLPTTPTRAPTGHGGLLDFSEHGFEEEPAMERVESGRELRAKMLEKLSKENSLDLADSNPSTCTPDVGWVSELVKTKLNVRDGRNIF 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51940094 51944596 + XM_039023227.1 Bhi02g01932 28454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01932 393 Gene3D - 135 198 - -
Bhi02g01932 393 PANTHER UNKEMPT FAMILY MEMBER 9 381 IPR045234 -
Bhi02g01932 393 SMART c3hfinal6 134 160 IPR000571 GO:0046872
Bhi02g01932 393 SMART c3hfinal6 169 192 IPR000571 GO:0046872
Bhi02g01932 393 MobiDBLite consensus disorder prediction 197 220 - -
Bhi02g01932 393 ProSiteProfiles Zinc finger C3H1-type profile. 135 161 IPR000571 GO:0046872
Bhi02g01932 393 MobiDBLite consensus disorder prediction 235 259 - -
Bhi02g01932 393 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 139 159 IPR000571 GO:0046872
Bhi02g01932 393 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 9 381 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01932 Bhi-Chr2:51940094 Bhi11g01385 Bhi-Chr11:40606187 3.07E-60 dispersed
Bhi02g01932 Bhi-Chr2:51940094 Bhi02g01933 Bhi-Chr2:51940095 0 tandem
Bhi05g01952 Bhi-Chr5:60517018 Bhi02g01932 Bhi-Chr2:51940094 7.61E-66 transposed
Bhi06g01669 Bhi-Chr6:47402705 Bhi02g01932 Bhi-Chr2:51940094 7.99E-152 transposed
Bhi02g01932 Bhi-Chr2:51940094 Bhi09g03180 Bhi-Chr9:81372786 1.85E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
490 PF00642 zf-CCCH 1.80E-06 CL0537 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01932 - - csv:101204432 723.391