Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01933 TATGGCGGTGGTTTTGGCAAGGAGTGTTGTCTGGAAAAACTGTAACCGTAACCCACCACCGTCTTCTCCGGCACAGACGATATGTTAATCAGTGAACGCCACCGCCCTGGTCCAGTGGTTCACATCACTCCATTGACGATACCGGAGGAACCTCCTGCAAGCGAGACGCGGTTTCCTTTTCCCCTGAGTGGAATCTCGGTGAGTTCTGATGTTACTGCCAATGGCGGCGATTATTCTCCCTATTATCTCCAGGAAGCCCTAGCGGCACTCCAGCGATATACGAATGAATCGGAGATTGAATCTGATTCGGAGTTGTCCGGACGGGAATCGGACGTTCCGGTGGGTGCTTACTCGGGCGATCATTTTCGGATTTTTGAGTTCAAGGTGAGGAAGTGTACGCGTGGACGGTCTCATGATTGGACGGAGTGTCCGTATGCTCATCCAGGCGAGAAGGCCCGCCGGAGAGATCCGAGGAAGTATCATTACTCTGGTACGGCATGCCCTGACTTTCGAAAAGGTAGCTGTAAGAAAGGCGATTCATGCGAGTTTGCGCATGGTGTTTTTGAGTGTTGGCTTCATCCTGCTCGTTACAGGACTCAGCCGTGTAAGGATGGGACTAACTGTCGGCGGAGAGTCTGTTTCTTCGCTCATACTCCTGAACAACTTAGGGTTTTGCCTCAACAGAGCCCGAGAAGCGCGAACTCGCCTGAGTCGTATGATGAATCTCCTATTCGGCAGTCTTTGGATGGATCCTGTGCTAAATCGTTGCCGTTTCTGTCTTCTCCGGTGTCCGTTTCACCGTCCGCGACTCCGGTGGACTCCCCACCGTTATCGCCCATGACTCGGTCTCTCGGCCGGTCCCTTGGCTCGAGTTCCATCAATGAAATGGTCGCATCCCTCCGTAACTTGCATCTAAGCAAGGTCAAATCCCTGCCATCCTCCTGGAATATTCAAATTGGATCTCCTGGTTATCCATCTCGAATCTGCCATGGATTTTGTAGCCTTCCAACAACTCCAACTCGGGCTCCAACTGGTCATGGAGGACTGCTCGACTTCTCGGAGCATGGATTCGAGGAGGAACCGGCGATGGAGCGAGTCGAATCTGGGAGGGAGCTGAGAGCAAAGATGCTGGAGAAGCTGAGCAAGGAAAATTCTCTGGACTTGGCTGATTCAAATCCTTCAACCTGCACACCAGACGTTGGATGGGTATCAGAGCTAGTGAAGTGAGTCCTCAAATTGAACTTTTGGTTGGTTCTTCAAATGGGTTTTTTTCTCTAATCATCATTCAATTCCGATTCTAAGGAAAAAAAAAAATTAGCCTAAGCCAAACCTTTTGTTTGATATGTAAATACACAAAATGGGTGGCAACTGAAACTGGAAGACAATAGGATTTAATTTTTAAATGTGTAAGCCTTAAATATATGTATATATGGCTCTGTTTTTAGATTTTGAGGTGGGTTGAAAGAATTTAGAAAACTATATTTTGATGGAGAAGACAAGAAAATTCCATCTGACTCCAATGTATAGGTAGTTTTAGTAACTAGATATGATCTATAGGGGATCATGGGTTCTGATAGTTTTCTATTTTCTGATCATTGTGATTATATTGTAAGTTAATCTTGTGTTCCTACTGCAATTATATGGATGAAGTTGATTTAAATTATTGTTGACTA 1673 46.38 MLISERHRPGPVVHITPLTIPEEPPASETRFPFPLSGISVSSDVTANGGDYSPYYLQEALAALQRYTNESEIESDSELSGRESDVPVGAYSGDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCFFAHTPEQLRVLPQQSPRSANSPESYDESPIRQSLDGSCAKSLPFLSSPVSVSPSATPVDSPPLSPMTRSLGRSLGSSSINEMVASLRNLHLSKVKSLPSSWNIQIGSPGYPSRICHGFCSLPTTPTRAPTGHGGLLDFSEHGFEEEPAMERVESGRELRAKMLEKLSKENSLDLADSNPSTCTPDVGWVSELVK 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51940095 51941767 + XM_039023228.1 Bhi02g01933 28455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01933 381 PANTHER UNKEMPT FAMILY MEMBER 9 381 IPR045234 -
Bhi02g01933 381 SMART c3hfinal6 134 160 IPR000571 GO:0046872
Bhi02g01933 381 SMART c3hfinal6 169 192 IPR000571 GO:0046872
Bhi02g01933 381 SUPERFAMILY CCCH zinc finger 133 163 IPR036855 GO:0046872
Bhi02g01933 381 MobiDBLite consensus disorder prediction 197 220 - -
Bhi02g01933 381 ProSiteProfiles Zinc finger C3H1-type profile. 135 161 IPR000571 GO:0046872
Bhi02g01933 381 MobiDBLite consensus disorder prediction 235 259 - -
Bhi02g01933 381 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 139 159 IPR000571 GO:0046872
Bhi02g01933 381 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 9 381 - -
Bhi02g01933 381 Gene3D - 135 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01933 Bhi-Chr2:51940095 Bhi06g01669 Bhi-Chr6:47402705 4.37E-149 dispersed
Bhi02g01932 Bhi-Chr2:51940094 Bhi02g01933 Bhi-Chr2:51940095 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
491 PF00642 zf-CCCH 1.70E-06 CL0537 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01933 - - csv:101204432 723.391