Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g01956 TTGGCCTCATTTTATATGAATTCAAGAGACGAAATATTGAAGCAAACAAAAACTTCGGCTATGAAGCTTCGTTTTACTTTCACACTTCACCTGCAACATTTCTACCACCAAAAAAAATAACAAAAAATCCGCCATAGCCAAAAACCTTCAAACAATTTCTTCATCTTCTCCACATGACGACATCTCTTTCTTCTTCTCTTCTCTTTTTTCTGAAGCCCATTTCCTTCTTCTTCTTCCTCTGTTTCCACCATGCCAATTCCCAGCTCTACCAACAAGAACACTCTGTTTTGCTCCGATTGAACCAGTTCTGGCAAAATCAAGCTCCAATCAGCCATTGGCTTTCCTCAAATGCTTCTCATTGTACATGGCCGGAGGTTCAGTGTACCAACGACTCTGTCACTGCCCTGTCTTTCACTTTCTACAATTTGAACGGAACCTTCCCCCCTTTCATTTGCGATCTCAACAATCTCACCCACCTTGATCTTCAACTCAATTTCATCACCGGTGGCTTTCCGACCACTCTTTACGATTGTTCCAACCTTACTTACCTCGACCTCTCGCAGAATTTATTCGACGGGACGATCCCTGATGACGTCGACCGCTTGTCTCGCCTCCAATATCTTAATCTTGGCGGCAACAGCTTCTCAGGGGAAATTCCGGCGTCTATTTCTCGGTTGTCGGAACTTCGGTTCCTTCATCTTTATGTGAATAAATTCAATGGGACTTACCCATCTGAAATCGGTAACTTGTTGAATCTGGAAGAATTGCTAATGGCTTACAATTCAAATCTGCAACCGGCTGAATTGCCGTCCACTTTAGCGCAATTGAAGAAATTGACGTATTTATGGATGACAGAGTCGAATGTAATCGGTGAAATTCCTGAATGGATTGGAAACTTGACCGCCCTCGAGAAATTGGATTTGTCGAAGAACAATTTGATTGGGAAAATCCCCAGTAGTTTGTTTACGTTGAAGAATCTCAGTGTAATTTATCTGTACAAGAACAATCTATCAGGAGAAATTCCTCAGCGGATTGATTCTAAAAAAATCACCGAATACGACTTTTCGGAAAATAATTTGACCGGAAGAATTCCGGCAGCTATCGGCGATCTACAGAATCTGACGGCTCTGCTTCTGTTTTCAAATCAGTTATATGGAGAAATCCCAGAAAGCATCGGCCGTCTTCCATTATTAACAGACATCCGATTATTCGACAACAATTTAAACGGTACACTGCCACCGGATTTCGGCCGGAATTTGATCCTCGAAGGTTTTCAAGTGAATTCCAATAAACTCACCGGAAGCTTGCCGGAGCACTTGTGCTCCGGCGGTAAGCTCAAAGGAGTGATTGCTTACGAGAATAGTCTTAGTGGGGAGCTACCAAAATCTCTTGGGAATTGCGATAGCTTGATCATCGTTGATGTTCAAAAGAACAATTTTTCAGGGGAAATTCCGGCCGGTCTATGGACGGCTCAGAATTTGACTTATGTAGTGATGAACAACAATTCTTTCACAGGCGATTTTCCGAAGAGAGTTTCCAAGAATCTTGCGAGATTTCAAATCAGTAACAACAGATTTTCAGGGGAAATTCCATCGGAGTTATTTTCATTTTGGAATGTGACAGAGTTTGAAGCAAGCAATAATCTGTTGACAGGACAAATTCCTGAAGAACTCACTGCTCTTTCAAAGTTGAACAAGCTTTCGCTTCATGGAAATCAACTCACTGGGGAGCTTCCAAAGAAAATCATTTCATGGAGATCATTGCAGAGTCTTAAACTGAATCGAAATCGTCTTTCTGGTGAAATACCTGATGAACTTGGCGATTTACCGAACCTTAATGATCTCGATTTCTCGGAGAATCGACTTACCGGGACAATTCCGACTGAGCTAGGAAAATTGAATCTGAATTTCCTTGATCTTTCTTCAAATTTTCTGTCTGGGATAATCCCATCTGCATTTGAAAATGCAATCTTTGCAAGAAGCTTTTTGAACAATCCGGGTCTTTGTTCGAACAACGCAGTTCTAAATCTCGATGGCTGTAGTTTGCAGAATTCGAGGAAGATTTCGTCGCAGCATCTTGCTCTGATCGTAAGCTTGGGTGTAATAGTATCGATACTCTTTGTAGTTTCTGCTTTGTTCATAATCAAAATCTACAGGAAAAGTGGAAACAGAGCAGATATTGAATGGAAACTGACCTCATTTCAGAGGCTGAATTTCTCGGAGGCAAATCTTTTATCTGGGCTATCGGAGAACAATGTGATTGGGAGCGGTGGATCCGGGAAAGTTTACCGGATCCCGGTGAATAGTTTGGCTGAAACAGTGGCCGTGAAGAAGATATGGAACAACAGAAAGTCAGACCACAAGCTCGAGAAAGAATTCATGGCGGAAGTGAAAATCCTCAGTTCGATTCGACACAAGAACATAATCAAACTCCTCTGCTGCGTTTCCTGTGATACTTCACGGCTTCTCGTTTACGAGTACATGGAGAAGCAAAGCCTCGACAAATGGCTACACAAGAAGAACTCACCGCCGAGAATTACAGGGTCGGAACCTATTTGCGGTGTTACCCTCAATTGGCCGACGAGATTTCAAATTGCAGTAGGGGCAGCACAAGGCCTGTGTTATATGCACCATGAATGCTCCCCGCCAGTAATTCACAGAGACTTGAAGTCCAGTAATATCTTACTGGATTCAGAATTCAATGCCAAAATAGCAGATTTCGGCTTAGCCAAGTTGCTCATAAAGCAAGGGGAACCGGCCTCAGTCTCCGCCGTTGCCGGCTCTTTTGGATACATAGCTCCAGAGTATGCTCAGACACCAAGAATTAACGAGAAGATCGATGTGTTTAGCTTTGGAGTCATTCTTCTGGAGTTGGCAACTGGAAAGGAAGCTCTCGACGGCGATGCAGACTTGTCTCTGGCGGAGTGGGCATGGGAGTATATTCAACAAGGCAAGCCACTAGCCGATGTGTTGGATGAGGATGTGAAGGAACCACAATATCTTGATGAAATGTGCAGTGTTTTCAAATTGGGTGTGATTTGCACTTCCGGTTTGCCGACCAACCGGCCGAACATGAACCAGGCATTGCAAATCTTGATCCGTAGCCGAACCTCGACACCCCCAAACAATGGAGATAAAAAAAACAGGGACAGCGAAAGTACGCTGAGGAACAATGACGATTACTTGAAAGATGTAACAGTCAAAGGTTCTCTCCAATAGTCTCTTTTTTTAGGATCAAGATTCACCATCACATGTTTTTGAACCTTGGTCGTTAAATATAATGTGGAGACTGAAGAGGACCCAGCACTCCAGCCACTGCTCCGAGCAGAAATTGCTAGAGTTGATAGGTCGGCTCGGTCTCTTTGTAAATTTTGAATAACAATCCATGTCACGTGTATTTTAAGAACTACAATAATAATAAATGAGAACTCATTCAA 3436 42.84 MTTSLSSSLLFFLKPISFFFFLCFHHANSQLYQQEHSVLLRLNQFWQNQAPISHWLSSNASHCTWPEVQCTNDSVTALSFTFYNLNGTFPPFICDLNNLTHLDLQLNFITGGFPTTLYDCSNLTYLDLSQNLFDGTIPDDVDRLSRLQYLNLGGNSFSGEIPASISRLSELRFLHLYVNKFNGTYPSEIGNLLNLEELLMAYNSNLQPAELPSTLAQLKKLTYLWMTESNVIGEIPEWIGNLTALEKLDLSKNNLIGKIPSSLFTLKNLSVIYLYKNNLSGEIPQRIDSKKITEYDFSENNLTGRIPAAIGDLQNLTALLLFSNQLYGEIPESIGRLPLLTDIRLFDNNLNGTLPPDFGRNLILEGFQVNSNKLTGSLPEHLCSGGKLKGVIAYENSLSGELPKSLGNCDSLIIVDVQKNNFSGEIPAGLWTAQNLTYVVMNNNSFTGDFPKRVSKNLARFQISNNRFSGEIPSELFSFWNVTEFEASNNLLTGQIPEELTALSKLNKLSLHGNQLTGELPKKIISWRSLQSLKLNRNRLSGEIPDELGDLPNLNDLDFSENRLTGTIPTELGKLNLNFLDLSSNFLSGIIPSAFENAIFARSFLNNPGLCSNNAVLNLDGCSLQNSRKISSQHLALIVSLGVIVSILFVVSALFIIKIYRKSGNRADIEWKLTSFQRLNFSEANLLSGLSENNVIGSGGSGKVYRIPVNSLAETVAVKKIWNNRKSDHKLEKEFMAEVKILSSIRHKNIIKLLCCVSCDTSRLLVYEYMEKQSLDKWLHKKNSPPRITGSEPICGVTLNWPTRFQIAVGAAQGLCYMHHECSPPVIHRDLKSSNILLDSEFNAKIADFGLAKLLIKQGEPASVSAVAGSFGYIAPEYAQTPRINEKIDVFSFGVILLELATGKEALDGDADLSLAEWAWEYIQQGKPLADVLDEDVKEPQYLDEMCSVFKLGVICTSGLPTNRPNMNQALQILIRSRTSTPPNNGDKKNRDSESTLRNNDDYLKDVTVKGSLQ 1014
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 52850225 52853750 - XM_039022453.1 Bhi02g01956 28478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g01956 1014 SUPERFAMILY RNI-like 296 626 - -
Bhi02g01956 1014 MobiDBLite consensus disorder prediction 977 1001 - -
Bhi02g01956 1014 ProSitePatterns Protein kinases ATP-binding region signature. 696 720 IPR017441 GO:0005524
Bhi02g01956 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Bhi02g01956 1014 Pfam Protein kinase domain 692 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi02g01956 1014 Gene3D Ribonuclease Inhibitor 32 183 IPR032675 -
Bhi02g01956 1014 Gene3D Ribonuclease Inhibitor 184 290 IPR032675 -
Bhi02g01956 1014 Pfam Leucine rich repeat 98 156 IPR001611 GO:0005515
Bhi02g01956 1014 Pfam Leucine rich repeat 528 585 IPR001611 GO:0005515
Bhi02g01956 1014 SMART LRR_typ_2 144 168 IPR003591 -
Bhi02g01956 1014 SMART LRR_typ_2 503 527 IPR003591 -
Bhi02g01956 1014 SMART LRR_typ_2 313 337 IPR003591 -
Bhi02g01956 1014 SMART LRR_typ_2 576 597 IPR003591 -
Bhi02g01956 1014 SMART LRR_typ_2 242 266 IPR003591 -
Bhi02g01956 1014 SMART LRR_typ_2 551 575 IPR003591 -
Bhi02g01956 1014 Gene3D Transferase(Phosphotransferase) domain 1 771 1001 - -
Bhi02g01956 1014 SUPERFAMILY RNI-like 62 382 - -
Bhi02g01956 1014 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 15 995 - -
Bhi02g01956 1014 ProSiteProfiles Protein kinase domain profile. 690 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi02g01956 1014 Gene3D Ribonuclease Inhibitor 291 456 IPR032675 -
Bhi02g01956 1014 Gene3D Ribonuclease Inhibitor 457 697 IPR032675 -
Bhi02g01956 1014 MobiDBLite consensus disorder prediction 985 1001 - -
Bhi02g01956 1014 SMART serkin_6 690 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi02g01956 1014 Gene3D Phosphorylase Kinase; domain 1 698 770 - -
Bhi02g01956 1014 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 15 995 - -
Bhi02g01956 1014 Pfam Leucine Rich Repeat 245 263 IPR001611 GO:0005515
Bhi02g01956 1014 SUPERFAMILY Protein kinase-like (PK-like) 685 974 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01956 Bhi-Chr2:52850225 Bhi08g02260 Bhi-Chr8:64514596 0 dispersed
Bhi02g01956 Bhi-Chr2:52850225 Bhi04g00874 Bhi-Chr4:21995166 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87499 PF00069 Pkinase 2.20E-46 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g01956 - - csv:101214935 1707.58