Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g02028 AAAAAAGGGCCTTTTAGGCTCTGACGATTGTAAGTCGGAATCGAAGATATAGACAGACTCTCTCTCTGCTATTCCTCTTTGTTCCCTTTCTCTTTATAAGGGTATCTAAGATCTTGTTCACTTGAGTATCATCTGTCTCTTAAAAAGCTGTCTGAGATTTATTTCAAAGTTCAAACGTGATGGATCAGCAAGGGCATGGCCAGCCTCCGTCCATGGGAGCGGTTGGCAGTGGAGGTCAGATGGCATATGGTAGCAACCTCTACCATCCCAGCCAAATGACTGTAGGTCCGACTTCGGGATCTGTCGTTACATCAGTCGGAGGTATTCAGTCTACGAGTCAACCTGGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTTAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGACGAGGACGTACGAATGATATCGGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACCGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTTGACTTTCTGGTTGATATAGTACCGAGGGAGGATCTGAAAGACGAAGTACTCACGTCGATTCCAAGAGGATCAATGACAGTTGGGGGGCCTGGAGAAGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTTGGGGCACCTGGAATGATCATGGGTAAGCCCGTGATGGACCCAACCATGTATGCTCCACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGCACAAGATCAAGCCCCTCCTGATCAATAGTAGCTTGCAGCATGGAGGTGAAGACGGAGTCTCCTCCGAAGCAAGCTCACAACGATGCCAAACCACACACACACACACCAGACCGACAGGAGAATTTATACTGAAGATTTGATCTGAAGCCCTACATAATACTTTCTGTAGATATTTTGCTTGACAAGATTAGATCATCTTGATTGAGCTAGAAAAAGTCTCTTCTTTTTCTATTCATGCTTTATTTCTATTCTGCATATTGGAAATGACAATTGAAAGGAATGTATAACTTCATATGATACTCCAAAAATTTGATGCTTACCTTGACATTCCCATATAAAAAAAACTGTAGTTTCCTTA 1292 43.65 MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSMTVGGPGEALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAPQSHPYMPPQMWQHAQDQAPPDQ 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55177350 55180645 + XM_039023142.1 Bhi02g02028 28550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g02028 260 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 259 - -
Bhi02g02028 260 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 103 166 IPR003958 -
Bhi02g02028 260 Gene3D Histone, subunit A 65 181 IPR009072 GO:0046982
Bhi02g02028 260 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 259 - -
Bhi02g02028 260 SUPERFAMILY Histone-fold 71 175 IPR009072 GO:0046982
Bhi02g02028 260 MobiDBLite consensus disorder prediction 238 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00523 Bhi-Chr2:10022921 Bhi02g02028 Bhi-Chr2:55177350 2.62E-69 dispersed
Bhi02g02028 Bhi-Chr2:55177350 Bhi02g02030 Bhi-Chr2:55177480 0 dispersed
Bhi02g02028 Bhi-Chr2:55177350 Bhi02g02029 Bhi-Chr2:55177480 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
495 PF00808 CBFD_NFYB_HMF 2.80E-18 CL0012 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g02028 K08066 - csv:101209664 449.514