Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g02046 GTCAGTAAACCAAAAAGCTGAGACCAAAAAGAAAAACAAAGAAAGGGTTCCATTTTTCATTATAATTTCTCTCCTCAAAGCACTTTCTTCAAAATCACTTCCCCTGCTGTTATCGCCTTTCGATTCTGCCACCCATTTCTCCGACACCTTCCCCTTCCCCAAAAACCACTTCCATTTTGTTCAAACTTTTCAATTTTATGGCCGGAATCCCCTCTGAGGGGTTGGGGGATGATTTTTTCGAGCAGATTCTGGCGGTTCCGTCGGCTTACGGCGGCGGAGGTGGCGGCGATATGGTGTCTATGCCTATGGGTTTGCAACTTGGGTCCGGCGGCGGTGGCGGCGGAGGAATGGGTATGCCTTTGGGACTGAATTTAGAACAAGGGTTTTTGAGACAAGAGAGGTTTAGAGAAGAAATTGATGGGCATAATAATAATGCTTCTTCTTCTTCAACTGCTTCTTCAGGAATCACTGAGAGAGATTCTTCGATGCAGCACATGACGAACTTGTTTCCGACCTTTGGACATCTGCAGACTCAACAACTCCGCCCACCGCCGCCGTTACATCTCCACCAGCCCTTTCACAATCAGACAACCCCCGGGACGGTAGCTGCCGTACCACAACCACCTCAAGTCCGTCCAAGAGTTCGAGCAAGACGAGGGCAAGCGACCGATCCTCACAGTATTGCCGAAAGGTTGCGTCGAGAAAGAATTGCAGAAAGAATGAAAGCCTTGCAGGAGTTAGTTCCTAGTTGCAATAAGACTGATCGAGCGGCAATGCTCGATGAAATTGTGGATTATGTAAAGTTTCTTAGGCTTCAAGTAAAGGTTTTAAGCATGAGTAGACTAGGTGGGGCTGGTGCGGTGGCTCAACTTGTGGCCGATGTGCCCCTATCATCAGTCGAGGGAGAAGGCATTGAGAGTGGCAGCAATCAGCAAGCATGGGAAAAGTGGTCAAGTGATGGCACAGAGCAACAAGTAGCCAAATTAATGGAAGAAGATGTGGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATCATGCCTATCTCGTTAGCCTCAGCAATCTTCAGGACACACCAAGCAGATCCACAAATCTTAGTCAAGCCAGAAATGAACACTCCCTAGACCACGGGCTCTGACGACATCGCAATTGGCACATGCCCTTTCTCATACTCAACCGTTCTAATTTTTTCTATCTTTTCTTAACTATGAATATAATGTCAGTATAATATCTAGTCTTTCTAATTTCTTATTTTAAGAGGCGTATTCAAGTCAATGCAACTGTTTTAAGCTTGAAAGTAGTACTTGAAGTGCTTCTTCTTTGCCAAGCTCAAGTTTAAAGAAAGTGATTTTCAAAAGGTCAA 1369 45.51 MAGIPSEGLGDDFFEQILAVPSAYGGGGGGDMVSMPMGLQLGSGGGGGGGMGMPLGLNLEQGFLRQERFREEIDGHNNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQTQQLRPPPPLHLHQPFHNQTTPGTVAAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGSNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQADPQILVKPEMNTP 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55441510 55450437 + XM_039024082.1 Bhi02g02046 28568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g02046 310 MobiDBLite consensus disorder prediction 76 92 - -
Bhi02g02046 310 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 7 299 - -
Bhi02g02046 310 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 214 IPR036638 GO:0046983
Bhi02g02046 310 MobiDBLite consensus disorder prediction 73 92 - -
Bhi02g02046 310 SMART finulus 161 210 IPR011598 GO:0046983
Bhi02g02046 310 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 299 - -
Bhi02g02046 310 MobiDBLite consensus disorder prediction 134 159 - -
Bhi02g02046 310 Gene3D - 148 205 IPR036638 GO:0046983
Bhi02g02046 310 Pfam Helix-loop-helix DNA-binding domain 160 204 IPR011598 GO:0046983
Bhi02g02046 310 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00893 Bhi-Chr2:18973805 Bhi02g02046 Bhi-Chr2:55441510 7.41E-66 dispersed
Bhi02g02046 Bhi-Chr2:55441510 Bhi09g01118 Bhi-Chr9:26145250 1.68E-94 dispersed
Bhi06g01808 Bhi-Chr6:50509066 Bhi02g02046 Bhi-Chr2:55441510 2.76E-12 dispersed
Bhi02g02046 Bhi-Chr2:55441510 Bhi09g03191 Bhi-Chr9:81814217 5.50E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
500 PF00010 HLH 6.70E-08 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g02046 - - csv:101216855 476.092