Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g02047 GATAGGCTTGGAAGACACCAATTTTGTTGAAATAATTGGCTCCTTATGGCAACAACCACATCAAAACCATAAAACCCGCGAATGCCGCTTTGTCCACTAGTATATTACAATTCAGTTTCTACACCACCGTTACTTTTTCTTCTTTTTTGCTCTCTTTAAATCAATTTCCCCACACCCACTTTAGAAATTCCAATCAAACTCCCAAAGGGATAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGACGGACAAGAAGAAGTGGGTTATGGAGAAACATTATGGATCAAATGGTTTGAGTCCATGTTCCTCCATTTCTAATGGGGTTCCACAAGAAAGTCGAGATGTGACTAAAGATTTAAAGGAAGCCCATGAATTAATTGAAGCTATTGGGGCTTTTTCTGGGTTTCGAAAGACGCAATCCAAAGAGTGTTTGAATTTGGTTAGGAGGTTGAAGATGCTTGTCCCTTTGTTGGAGGAGATTAGGGACCTTCATGATATGGTTCCAGCTGAGGCTTTGATTTCTCATATTGCTAATTTGAAAGAGGCTCTTGTTTTGGCCAAAAGGTTACTGAAGAATTGCCACAATGGGAGTAAGATTTACCTGGCATTTGAGAATGAGGCTGTGATGGCAAGGTTTCATGGTGTTTATGACAAGTTGAAGGAGGCCCTTGATGGCATACCTTATGATGAGCTTGGAGTCTCAGTTGAATTGAAAGAGCAAGTTGAGCTCATGTCGACCCAACTCAAAAGAGCAAAGTGTAGGAAAGATACACAAGACATGGAACTAGCAATGGACATGATGGTTGTATTTTCTAAAAACGATGAGAGAAATGCTGACCCTGTTATACTTGAAAGATTGGCAAACAAATTGGAACTACGTAAAATTGCAGATTTGGAAGCAGAAACCATAGCTGTACAAAAATTAGTTAGACGTAGAGGTGTGCCAAATTCTGAAAATCTCCAGCAAATTATAGAGCTTCTAGGCAAGTTTAAACAAATTGCAGGTATGGACAATACTGTTGCTCCTGATGGTCCTGTTGTGTCAAAATGTCTGCAACGGCTGCAACGTTGTCAGTCTACAATAATCCCTCATGAATTCCTCTGCCCCATTACCTTAGAAGTCATGACGGATCCTGTCATTGTGGCTACTGGGCAGACTTATGACCGAGAAAGTATACAGAAATGGTTGAATTCTAACCACCGGACCTGCCCGAAAACTGGACAAACATTAGTGCATTTGTCACTAGCTCCAAATTATGCCCTCAAGAACCTCATTTTGCAGTGGTGTCAAAATAATAACTATGATTTGCCGAAGAAGGAAGTTGTTGCTGGAATGGGAGACACTCCACCCGATCTCGCTCGAGAAATCTCCTCTTTAGTCCACAATCTATCATCGAGCCAGTTGGATGTCCAGAGAGAGGCTATCATCAAGATCCGTGTCCTTTCGAAGGAGAACCCTGAGAACAGAGTTTGGATCGCGAATAGCGGAGTCATCCCTCCGTTGGTTAAGCTCCTCTCCTACCCAGATCTCAATTTCCAAGAACACACGGTGACTGCTCTATTAAACTTGTCTATTGACGATGCGAATAAAAGACTCATAGCGAGAGAAGGAGCCATTCCTGCTATCATAGAAATCCTGCAACATGGAACAGAGGAGGCTAAGGAGAATTCTGCTGCTGCCCTGTTTAGCTTGTCAATGTTAGATGAAAATAAGGTTCTGATTGGATCTCTAAAGGGAATTCCGCCGTTAGTATTACTTCTTCGAGACGGTACAATCCGAGGGAAGAAAGATGCTGCAACTGCACTCTTTAACCTGTCACTGAATCAAACAAACAAGTCCCGAGCCATTAAAGCTGGTATCATACCACCACTTCTCTCTTTGCTGGAGGATAAGAACTTAGGAATGGTTGATGAAGCTTTATCAATCTTGTTACTCCTTGCATCACATCCCGAGGGACGATCCGAGATTGGAAATAACTCTTTCATCGAAATTCTAGTCAACATCATAATAAACGGGACTCCGAAGAACAAGGAATGTGCTACATCGTTACTTCTCGAGCTGGGACGAAACCATTCGCCTTCCATTTTGATTGCCCTGCAATTTGGTGTATATGAACATTTGGTAGAGCTCACAAGATGTGGGACAAGTAGAGCCCAGAGAAAAGCAACCTCACTTTTGCAATATATGAGCAAGTGTGAACACATTCCCTGACATCTGTGTAAAGATTTGTGATCTTTGTATTTTAGGAACTGTAAATCAGAATTTGCTTCTTTTTCTTTTGCCTCTTAATGTTGTTGTTGCTTACTTTGGCTTTCAAAAACGGACATATCAAAGCCAACAAACCACTCTGTAAATAGCCTTTTAGTTATGTAATGGTATATAACAAGAGGTGTTTTAGCTTATGGCTTTATTGGAGGAAAAGATGAATCAAGCATTTTATAA 2469 41.03 MEKHYGSNGLSPCSSISNGVPQESRDVTKDLKEAHELIEAIGAFSGFRKTQSKECLNLVRRLKMLVPLLEEIRDLHDMVPAEALISHIANLKEALVLAKRLLKNCHNGSKIYLAFENEAVMARFHGVYDKLKEALDGIPYDELGVSVELKEQVELMSTQLKRAKCRKDTQDMELAMDMMVVFSKNDERNADPVILERLANKLELRKIADLEAETIAVQKLVRRRGVPNSENLQQIIELLGKFKQIAGMDNTVAPDGPVVSKCLQRLQRCQSTIIPHEFLCPITLEVMTDPVIVATGQTYDRESIQKWLNSNHRTCPKTGQTLVHLSLAPNYALKNLILQWCQNNNYDLPKKEVVAGMGDTPPDLAREISSLVHNLSSSQLDVQREAIIKIRVLSKENPENRVWIANSGVIPPLVKLLSYPDLNFQEHTVTALLNLSIDDANKRLIAREGAIPAIIEILQHGTEEAKENSAAALFSLSMLDENKVLIGSLKGIPPLVLLLRDGTIRGKKDAATALFNLSLNQTNKSRAIKAGIIPPLLSLLEDKNLGMVDEALSILLLLASHPEGRSEIGNNSFIEILVNIIINGTPKNKECATSLLLELGRNHSPSILIALQFGVYEHLVELTRCGTSRAQRKATSLLQYMSKCEHIP 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55563195 55567087 + XM_039024294.1 Bhi02g02047 28569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g02047 648 SMART Ubox_2 277 340 IPR003613 GO:0004842|GO:0016567
Bhi02g02047 648 Coils Coil 146 166 - -
Bhi02g02047 648 CDD RING-Ubox_PUB 278 320 IPR045210 -
Bhi02g02047 648 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 490 532 IPR000225 GO:0005515
Bhi02g02047 648 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 27 645 - -
Bhi02g02047 648 Pfam Armadillo/beta-catenin-like repeat 523 556 IPR000225 GO:0005515
Bhi02g02047 648 Pfam Armadillo/beta-catenin-like repeat 480 518 IPR000225 GO:0005515
Bhi02g02047 648 Pfam Armadillo/beta-catenin-like repeat 438 477 IPR000225 GO:0005515
Bhi02g02047 648 Pfam Armadillo/beta-catenin-like repeat 397 436 IPR000225 GO:0005515
Bhi02g02047 648 Pfam U-box domain 274 344 IPR003613 GO:0004842|GO:0016567
Bhi02g02047 648 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 408 450 IPR000225 GO:0005515
Bhi02g02047 648 PANTHER U BOX DOMAIN-CONTAINING 27 645 - -
Bhi02g02047 648 MobiDBLite consensus disorder prediction 8 22 - -
Bhi02g02047 648 Gene3D - 27 139 IPR036537 GO:0007166
Bhi02g02047 648 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 449 491 IPR000225 GO:0005515
Bhi02g02047 648 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 348 IPR013083 -
Bhi02g02047 648 SUPERFAMILY ARM repeat 368 642 IPR016024 -
Bhi02g02047 648 SUPERFAMILY RING/U-box 274 348 - -
Bhi02g02047 648 Gene3D - 508 646 IPR011989 -
Bhi02g02047 648 Gene3D - 362 507 IPR011989 -
Bhi02g02047 648 ProSiteProfiles U-box domain profile. 273 347 IPR003613 GO:0004842|GO:0016567
Bhi02g02047 648 MobiDBLite consensus disorder prediction 1 22 - -
Bhi02g02047 648 SMART arm_5 603 643 IPR000225 GO:0005515
Bhi02g02047 648 SMART arm_5 397 437 IPR000225 GO:0005515
Bhi02g02047 648 SMART arm_5 479 519 IPR000225 GO:0005515
Bhi02g02047 648 SMART arm_5 520 560 IPR000225 GO:0005515
Bhi02g02047 648 SMART arm_5 438 478 IPR000225 GO:0005515
Bhi02g02047 648 SMART arm_5 561 601 IPR000225 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g02047 Bhi-Chr2:55563195 Bhi08g00620 Bhi-Chr8:20447784 5.24E-172 dispersed
Bhi09g01735 Bhi-Chr9:47217395 Bhi02g02047 Bhi-Chr2:55563195 6.15E-09 dispersed
Bhi09g01736 Bhi-Chr9:47217395 Bhi02g02047 Bhi-Chr2:55563195 6.15E-09 dispersed
Bhi02g02047 Bhi-Chr2:55563195 Bhi08g00619 Bhi-Chr8:20447784 5.24E-172 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g02047 - - csv:101214151 1176.77