Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g02101 AATTCTCTAGTGGGCAGGCCAAAGAAAGATCCCTTTTTTTTCTTTTTTTCCTTTTTTTTTCCCCCCTTTCTTTCTTGTTGCCTTCTATAACCTCTAATTTGCATCTTCCATGAAAGCTTCTTCTCTTCACCAAAAATGGAGCCCAAAATCCTTCCTTTTCTCTTCCACTAAACCCTAATAGCCAAGCCCTTTTTTTTTTTAATTTCTATTTCTAAAGAAAATAAGAAATTAGTGTTTTTAGGGTTTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTGTAAAAAAACATTTCTCAATGTCCAAAATCTCAGGGTGTTCTGATGATGGTGGGAGCTTTGTTTCTGATGGTGAGAAATTAGAGAATCAGTTCAGCCATGGAAGCTCTCAATCCCATCAATACCCTCAGCTAAAAGCTCCCAAGAAGAAAAGGAACTTGCCAGGAACACCAGATCCTGATGCGGACGTGGTAGCGTTATCTCCAAAAACTCTTATGGTGACGAATCGATTCATTTGCGAAATATGCAACAAAGGATTTCAAAGAGACCAAAACTTGCAACTGCACAGGCGAGGGCATAACCTACCATGGAAGTTGAAGCAAAGGACGAGCGGGAGCGAGACAAAGAGGAAGGTGTACGTGTGCCCAGAACCGTTGTGCGTCCACCATGAACCGGCGCGGGCGCTCGGAGACCTCACCGGAATCAAGAAACATTACAGCAGAAAACATGGGGAGAAGAAGTGGAAATGTGAGAAATGCTCCAAAAAATATGCAGTTCAATCTGACTTGAAAGCTCATTCCAAAACCTGTGGCTCCAAGGAATACAAATGTGACTGTGGCACAATCTTTTCCAGAAGAGATAGCTTTATCACCCACAGAGCATTTTGTGATGCCTTAGCACAAGAAAACAACAAACTATCTCATCAAGTATCAACAACAATGGCTTCCACCGCCATTAATGCACCTTCCTTTCTTTCTCAATCCCCCGTCCTTTTGCCGCCATTAACGCTGCCCCATGACCTTATGCCTATTCCTCCAAAGCCCTTAAACCTATCTGTTGGATCCATGTTTTCATCTTCCATTTCCAATAACTCCACCACCGCCGCCAACGACGGCCACCACTTTCCCTCCCCCTCTGCCTTCATGTCTGCCACCGCCCTTCTGCAGAAGGCAGCTCAGATGGGAGCTGCCGTTAGCGGTGGTGGAAACTCTACTCTTTGTTTGGACTCGTCGATGAGCCATGAGAAGAAAGGATTTGTAACAACCATGGCTCCCTCTTCCTTCTGTGGGCTATTAGCTACCAACTGTTTGCAAAAATGTCAAGAAGAAAACATTTTGTCCCATCTATCTTCCAAGGGCAAAGCTGCGGACACGGAGATGATCGTCGACGACAACATTCCGATGCTGAACGGAGTGTTCGATCAGCCGCTCGTGGAGGCGGCGAGGACGAAGACGATGACACTAAATTTGTTGGGGGCTGAGGGAGGAAAAGGAATGACATTTCAAGCACAAGAAAATGTGGGGTTTGGAGGGCTTGTGGAGAATATGAGTTACTTTAGAAACCAAGGAGCCAATATGGGAAGGAATATTTGGGAGATTTAATAGTTTGAGAGTGAAAGCAAAGGCCATGTGATTTGTGATGTTTTTTTTAATATAGTTCTCCTCCTTGTTAGAAAATATTAAGAAACATTTTTTCCTTTTCAAATGACAATTATGGATAATTTTATATGCT 1728 43.17 MSKISGCSDDGGSFVSDGEKLENQFSHGSSQSHQYPQLKAPKKKRNLPGTPDPDADVVALSPKTLMVTNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSETKRKVYVCPEPLCVHHEPARALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALAQENNKLSHQVSTTMASTAINAPSFLSQSPVLLPPLTLPHDLMPIPPKPLNLSVGSMFSSSISNNSTTAANDGHHFPSPSAFMSATALLQKAAQMGAAVSGGGNSTLCLDSSMSHEKKGFVTTMAPSSFCGLLATNCLQKCQEENILSHLSSKGKAADTEMIVDDNIPMLNGVFDQPLVEAARTKTMTLNLLGAEGGKGMTFQAQENVGFGGLVENMSYFRNQGANMGRNIWEI 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 56924195 56931270 + XM_039022837.1 Bhi02g02101 28623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g02101 433 MobiDBLite consensus disorder prediction 1 56 - -
Bhi02g02101 433 SUPERFAMILY beta-beta-alpha zinc fingers 70 168 IPR036236 -
Bhi02g02101 433 MobiDBLite consensus disorder prediction 19 37 - -
Bhi02g02101 433 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 10 324 - -
Bhi02g02101 433 Gene3D Classic Zinc Finger 49 117 - -
Bhi02g02101 433 ProSiteProfiles Zinc finger C2H2 type domain profile. 148 176 IPR013087 -
Bhi02g02101 433 ProSitePatterns Zinc finger C2H2 type domain signature. 73 93 IPR013087 -
Bhi02g02101 433 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 10 324 - -
Bhi02g02101 433 SMART c2h2final6 71 93 IPR013087 -
Bhi02g02101 433 SMART c2h2final6 113 143 IPR013087 -
Bhi02g02101 433 SMART c2h2final6 148 168 IPR013087 -
Bhi02g02101 433 Gene3D Classic Zinc Finger 126 207 - -
Bhi02g02101 433 ProSiteProfiles Zinc finger C2H2 type domain profile. 71 93 IPR013087 -
Bhi02g02101 433 Pfam Zinc-finger double-stranded RNA-binding 71 93 IPR022755 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g02101 Bhi-Chr2:56924195 Bhi01g02708 Bhi-Chr1:67089612 1.65E-107 dispersed
Bhi02g02101 Bhi-Chr2:56924195 Bhi03g01682 Bhi-Chr3:35372763 2.47E-108 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
503 PF12171 zf-C2H2_jaz 6.10E-05 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g02101 - - csv:101206977 618.616