Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g02172 ATGGTAGTCCCTAAGGCAATTAACGAACTGATACCACAAAAGACTGTCATCGGATGGTGGATTTGCATGGACTACCACAAATTAAATGCGGCAACAAAGAAGAATCATTTCCCTTTGCTTTTTATCGACCAAATGCTAGACCGCTTAGCTGAAAATGATTTCTACTACTTCTTGGATGAGTATGCCAGCTATAACCAGATCATGATTGCTTCTGAAGATCAAGAAAAAACCACATTCACTTGCTCGTATGGAACATTTGCGTTTTGGCACATGCCGTTTGGCCTTTGCAATGCACCGAGCACTTTCCAAAGGGGAAACCGATTGTACATCGAAAAGGCAATAAAGAACTTGTTCTTGAAGGTCAATGAATTAACAAAGTCACTAACTCCTAAGAAACGGAGAAACTCTGAAAATGCTTCTAATGTAAGTAGAAGAGAAGTTGCAGAAGCAATGGCAAAGTCAACAAAGAAGAAGGATTTGATCATCCATGGTTCTGTGAGTATAAATATCGATGGTTCGAGCAACTTTGTCTCGAGTTTTTCAAAGAGAGTTGAGAAAGGAGTCAATCAGGACTGTTGCATTGTGTGGGAGGAATTTGGATATCAAAAGGATATGATATTTTGTGGGGTTTTTGATGGGCATGGACCATGGGGCCATTTTGTTGCAAAAAAGGTTAGAGAGTTAATGCCAACTGCTCTGCTTTGCAATTGGCAAGAAGCAGTAGTTCAAACTTCTCTTTGCCCACATTTGGAACTCAACTCAAGTAAAACACATCTACAATTCAATTTGTGGGAGCATTCTTACATAGAAGCCTGTGCTATGGTTGATCAAGAACTCGAGCGACACCGTAAAATTGACACGTTTCATAGCGGAACAACGGCCCTTTCCATCGTTCGACAAGGTGATATACTAGTCATTGCAAACCTTGGCGACTCTCGGGCCGTGTTGGCTACGACTTCTAATGATGGAAACCCGATCCCATCACTAATTCAGTTCACTGTCGATTTCAAACCGAATCTACCTCAGGAAGTTGAGAGAATAACACAATGCAATGGGAGGGTTTTTTGCTTGCGAGACGAACCAGGGACCCATCGTATTTGGTTGTCGGATGAGGAAACGCCGGGGTTGTCAATGTCAAGATCATTTGGCGATTTTTGCATTAAGAATTTTGGACTTATTTCCATGCCTGATGTAACACAAAGAAGTGTAACCAACAAAGACTTATTTGTTGTACTAGCAACTGATGGTATATGGGACGCGGTCTCGAATCAAGAAGCCGTGCAGATCGTACATTCAACTATAGATCGAGAAAAATCTGCTCGGCGACTGGTTGAGTATGCTACTCGAGCATGGAAGCGGAAGAGGCCGAGAATCGCAGCGGATGACATGTCGGTTATCGTCCTCTACCTCCATTCTGCACCTTTGCATCAACAATCTTTTGGTATATTGTAGCTCCATTCTAGAAAAATAAAAAAGAATTTCAATGTTTGTGTTCGCTCTTTCGAGTTACTTGTTACTACAAGATGCTAATCTCAAAATGGGATGTTGGTTAGCTTTAGAA 1561 41.58 MVVPKAINELIPQKTVIGWWICMDYHKLNAATKKNHFPLLFIDQMLDRLAENDFYYFLDEYASYNQIMIASEDQEKTTFTCSYGTFAFWHMPFGLCNAPSTFQRGNRLYIEKAIKNLFLKVNELTKSLTPKKRRNSENASNVSRREVAEAMAKSTKKKDLIIHGSVSINIDGSSNFVSSFSKRVEKGVNQDCCIVWEEFGYQKDMIFCGVFDGHGPWGHFVAKKVRELMPTALLCNWQEAVVQTSLCPHLELNSSKTHLQFNLWEHSYIEACAMVDQELERHRKIDTFHSGTTALSIVRQGDILVIANLGDSRAVLATTSNDGNPIPSLIQFTVDFKPNLPQEVERITQCNGRVFCLRDEPGTHRIWLSDEETPGLSMSRSFGDFCIKNFGLISMPDVTQRSVTNKDLFVVLATDGIWDAVSNQEAVQIVHSTIDREKSARRLVEYATRAWKRKRPRIAADDMSVIVLYLHSAPLHQQSFGIL 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 59071869 59128686 - XM_039024590.1 Bhi02g02172 28694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g02172 483 SMART PP2C_4 169 468 IPR001932 -
Bhi02g02172 483 CDD PP2Cc 175 470 IPR001932 -
Bhi02g02172 483 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 121 479 - -
Bhi02g02172 483 SUPERFAMILY DNA/RNA polymerases 17 105 IPR043502 -
Bhi02g02172 483 Gene3D HIV Type 1 Reverse Transcriptase, subunit A, domain 1 13 97 - -
Bhi02g02172 483 Gene3D - 37 106 IPR043128 -
Bhi02g02172 483 CDD RT_LTR 18 104 - -
Bhi02g02172 483 Pfam Protein phosphatase 2C 204 448 IPR001932 -
Bhi02g02172 483 Gene3D - 168 472 IPR036457 -
Bhi02g02172 483 PANTHER ALPHABET, ISOFORM E-RELATED 121 479 - -
Bhi02g02172 483 ProSiteProfiles PPM-type phosphatase domain profile. 176 470 IPR001932 -
Bhi02g02172 483 SUPERFAMILY PP2C-like 179 471 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g02172 Bhi-Chr2:59071869 Bhi06g01457 Bhi-Chr6:44211406 2.70E-173 dispersed
Bhi02g02172 Bhi-Chr2:59071869 Bhi10g01164 Bhi-Chr10:24496556 2.77E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g02172 - - bhj:120072181 988.793