Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi02g02229 | AACCTCTAGCTCCAAGTTTACGAGATTGAGATTTCACATTTACCCTACACAGTACACACCAACACTACAAAATAGCCTTCACCTGAACCCCTTCCCGCCTTTCTCGTCTCGTCTTGCTAAGCGGTTCCTTCTCCACTACTGCTACTGCAATGGGCATCAAGGGTTTAACCAAGCTTTTAGCTGATAATGCCCCCAAGGGCATGAAGGAGCAGAAGTTCGAATCCTATTTCGGCCGAAAAATCGCAATTGATGCCAGCATGAGTATTTATCAATTTCTTATTGTCGTGGGAAGAACTGGGACTGAGATGCTGACCAACGAAGCTGGTGAAGTCACTAGTCATTTGCAAGGGATGTTTAACCGGACAATAAGGCTTCTCGAAGCTGGAATTAAGCCAGTCTATGTCTTTGATGGAAAGCCTCCTGATTTGAAAAAACAAGAACTTGCAAAACGTTATTCAAAAAGAGCAGATGCTACTACGGACCTAGCAGATGCAATCGAGGTTGGCAACAAGGAGGACATTGAGAAATTCAGTAAAAGGACGGTGAAGGTTACAAAGCAGCACAATGATGACTGTAAAAGACTCTTGAGACTCATGGGAGTGCCTGTGATCGAGGCTCCCTCGGAAGCTGAGGCACAATGTGCTGCGCTTTGCAAGTTAGGAAAGGTTTACGCCGTGGCGTCAGAAGACATGGATTCGCTAACATTTGGATCTCCCAGATTTCTTCGTCATTTAATGGATCCGAGCTCAAGGAAGATCCCAGTTATGGAATTTGAAGTGGCAAAGATTTTGGAGGAGCTGAACCTCACCATGGACCAATTTATCGATTTGTGCATTCTTTCTGGATGTGATTATTGTGATAATATCCGAGGTATAGGGGGGCAGACTGCTTTAAAGCTTATCCGTCAACATGGGTCTATAGAAACTATATTAGAGAACATAAATAAAGAGAGGTACCAAATTCCAGATGATTGGCCTTATCAAGAGGCCCGGCAGCTTTTTAAAGAACCACTAGTATGTACTGATGAAGAGCAACTTGACATCAAGTGGACTACTCCAGATGAAGAAGGCTTATTAGCATTTTTGGTGAATGAGAATGGGTTCAACAGTGAGAGAGTCACGAAGGCAGTAGAAAAAATTAAGGCAGCCAAGAACAAATCATCACAGGGCCGGATGGAGTCATTTTTCAAGCCCGTCACTAATCCTTCAGTATCCATTAAGCGAAAGGTAAACAAATGTGTACTTAGATCTCCCAAACCAGGAGCCCAACATAAATTCTCCCCTCAAGCATTTTATTCGTCAAGGACAAAGGCCATTGGCAGCCTAGGCATGTCAATGTTAGACCATTCCTCCAAGTACTCGGGGTCAGGGCCATTAGTTATGGCTGTATGCTTCGGCACATGAAGCTGAAACCCCTTGTGAAATTTTAGGGTGACTAACTAATCTATGTAATGAAGCCTATGTAATTGCTTTGGCTTTCAGAAATGTACTTGAAAATCTTCATCCTTAATTCCTTGAACTTATTGTACCTCTACAAATAAAGAGTGGAAACGATAATTAAGGAGCTCAGGCTCTGGATTTGTAGGAGTCCTGGTTAATTAAAACCCACCCTGTGGTTCTTTAATATTATAAAAGTTGGTGCGCAGTGTAGAAGCAGTTTCTGACGCAGTCCTGAAGTGTGGGATAAAAAATTAGTGCAAGAAACGATGTAAGACGCATGATATGCAACATGCTAATCAATCATTTTGCCGCACATTTGTCATATCCACTTCCAATTTAATTTTA | 1784 | 42.43 | MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADATTDLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASEDMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFIDLCILSGCDYCDNIRGIGGQTALKLIRQHGSIETILENINKERYQIPDDWPYQEARQLFKEPLVCTDEEQLDIKWTTPDEEGLLAFLVNENGFNSERVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSIKRKVNKCVLRSPKPGAQHKFSPQAFYSSRTKAIGSLGMSMLDHSSKYSGSGPLVMAVCFGT | 417 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 60512041 | 60532837 | - | XM_039023533.1 | Bhi02g02229 | 28751 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi02g02229 | 417 | Gene3D | - | 10 | 222 | - | - | |
Bhi02g02229 | 417 | Pfam | XPG N-terminal domain | 1 | 107 | IPR006085 | GO:0004518 | |
Bhi02g02229 | 417 | ProSitePatterns | XPG protein signature 2. | 150 | 164 | IPR019974 | GO:0016788 | |
Bhi02g02229 | 417 | SUPERFAMILY | PIN domain-like | 2 | 234 | IPR029060 | - | |
Bhi02g02229 | 417 | Pfam | XPG I-region | 150 | 234 | IPR006086 | GO:0004518 | |
Bhi02g02229 | 417 | PANTHER | FLAP ENDONUCLEASE 1 | 1 | 376 | - | - | |
Bhi02g02229 | 417 | CDD | PIN_FEN1 | 4 | 332 | - | - | |
Bhi02g02229 | 417 | SMART | HhH_4 | 221 | 254 | IPR008918 | GO:0003677|GO:0003824 | |
Bhi02g02229 | 417 | Gene3D | - | 223 | 286 | - | - | |
Bhi02g02229 | 417 | SMART | xpgineu | 147 | 219 | IPR006086 | GO:0004518 | |
Bhi02g02229 | 417 | Hamap | Flap endonuclease 1 [fen]. | 1 | 347 | IPR023426 | GO:0016788 | |
Bhi02g02229 | 417 | SMART | xpgn3 | 1 | 108 | IPR006085 | GO:0004518 | |
Bhi02g02229 | 417 | ProSitePatterns | XPG protein signature 1. | 80 | 94 | IPR019974 | GO:0016788 | |
Bhi02g02229 | 417 | SUPERFAMILY | 5' to 3' exonuclease, C-terminal subdomain | 219 | 353 | IPR036279 | - | |
Bhi02g02229 | 417 | PANTHER | FLAP ENDONUCLEASE FAMILY MEMBER | 1 | 376 | IPR006084 | - | |
Bhi02g02229 | 417 | SMART | 53exo3 | 29 | 299 | IPR002421 | GO:0003677 | |
Bhi02g02229 | 417 | CDD | H3TH_FEN1-Euk | 222 | 289 | - | - | |
Bhi02g02229 | 417 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 28 | 42 | IPR006084 | - | |
Bhi02g02229 | 417 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 82 | 101 | IPR006084 | - | |
Bhi02g02229 | 417 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 146 | 163 | IPR006084 | - | |
Bhi02g02229 | 417 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 167 | 187 | IPR006084 | - | |
Bhi02g02229 | 417 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 224 | 239 | IPR006084 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi02g02229 | Bhi-Chr2:60512041 | Bhi08g02125 | Bhi-Chr8:61125068 | 6.12E-19 | dispersed | |
Bhi02g02228 | Bhi-Chr2:60511372 | Bhi02g02229 | Bhi-Chr2:60512041 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi02g02229 | K04799 | - | csv:101204273 | 702.59 |