Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00001 CCATTACAAAACAAATGTAAATTGGTCAATCCTCACTTTTCTTCTCTTTCTCTTCCTATTTCAGCCTTCCGGGTCTCTATAAATTGCATCTATTCATCTGGGTTTTGGCACAATTCTTTGAGACAAACACCAATAACTCTAACCAATTTCAACAAAATCCGACACTGTCTTAGCTAAGCTCTTTTCTTCCCCTTTTTCCTTCTCTGCTTGCTTCTTCCTTCACTCAAATCATATTCATGGCTGAGATTTCAGGATCAATCAACGGTCACCACACTGTTTCTTTGAACATCAAAGATGAATCCACAGCTGTGACCAGCAGAGAAGTAGCAGCTGATTGGCTCTCTGTACCTTTCATTCAAAAGTTGATTGCAGAGATTGTGGGGACATATTTCTTGATATTTGCTGGTGGGGCATCAGTGGTTGTGAATTTGAGCAAAGACAAAGTCATCACTTTCCCAGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTGATGGTTTATTCTGTTGGTCATATCTCTGGTGCTCATTTCAACCCTGCTGTTACCATAGCCTTTGCCACTACCAAGAGATTTCCATGGAAACAGGTGCCAGCTTATGTGATAGCTCAAGTTCTTGGATCAACATTGGCAGCTGGAACACTTAGGCTAATATTTAATGGACACCAAGACCATTTTTCAGGGACTCTTCCAAGTGATTCATATTTGCAAACCTTTGTGATTGAATTCATCATCACATTTTACCTAATGTTTGTAGTGTCTGGTGTTGCCACTGATAATAGAGCTATTGGTGAACTTGCTGGACTTGCTGTTGGTGCTACTGTTCTTCTCAACGTGATGTTTGCAGGGCCAATTACAGGAGCATCCATGAATCCAGCCAGAAGCTTGGGACCTGCCATAGTATCAAGGCAGTTCAAAGGGTTATGGATATACATTGTAGCTCCAATTTTTGGGGCAATTTCAGGTGCTTTGGTTTACAATACCATCAGGTTCACAGACAAGCCTCTAAGAGAGATCACTAAAAGTGCTTCTTTCCTCAAAGGACAAAGTCGCAGTGGTTCATCTTGAAGAGCTTTTGTTTTTTCTCACTTTCATAAAGTTGAAATTTTTCGAAGTGGGGTTATAGCAAATTAAGGGCATTTTTCTTTTCTTTCTTGTATTGCTTAAAGTTTAAGCAGATGACTCAAATCGCTGTAGTTTTGGTTTTAGTTTATCCAAAAATATGGAGATGAAGTAGATTGATGTCAGGAATCACGAGTAAAACTAAGAATAAGGCACAATATGGATAAGGAATTAAGGATAAGTCCAAACTTCTTGATGACTGCCTGCCAGTTCACATGAA 1341 39.6 MAEISGSINGHHTVSLNIKDESTAVTSREVAADWLSVPFIQKLIAEIVGTYFLIFAGGASVVVNLSKDKVITFPGISIVWGLVVMVMVYSVGHISGAHFNPAVTIAFATTKRFPWKQVPAYVIAQVLGSTLAAGTLRLIFNGHQDHFSGTLPSDSYLQTFVIEFIITFYLMFVVSGVATDNRAIGELAGLAVGATVLLNVMFAGPITGASMNPARSLGPAIVSRQFKGLWIYIVAPIFGAISGALVYNTIRFTDKPLREITKSASFLKGQSRSGSS 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15650 17742 + XM_039026811.1 Bhi03g00001 28778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00001 276 SUPERFAMILY Aquaporin-like 35 261 IPR023271 -
Bhi03g00001 276 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g00001 276 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g00001 276 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g00001 276 PRINTS Major intrinsic protein family signature 162 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g00001 276 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g00001 276 PRINTS Major intrinsic protein family signature 230 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g00001 276 CDD MIP 41 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g00001 276 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Bhi03g00001 276 Pfam Major intrinsic protein 34 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi03g00001 276 Gene3D Glycerol uptake facilitator protein. 7 262 IPR023271 -
Bhi03g00001 276 PANTHER AQUAPORIN NIP1-1-RELATED 3 269 - -
Bhi03g00001 276 PANTHER AQUAPORIN NIP2-1 3 269 IPR034294 -
Bhi03g00001 276 TIGRFAM MIP: MIP family channel proteins 45 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01815 Bhi-Chr1:38832607 Bhi03g00001 Bhi-Chr3:15650 8.61E-110 dispersed
Bhi03g00001 Bhi-Chr3:15650 Bhi11g03000 Bhi-Chr11:81335315 9.50E-77 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00001 K09874 - csv:101219297 508.064