Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00044 GACTGAACGAAACCCATAGCTTCTTCTTCTTGTTTTTCTGGTGTTGGTTGCATTAAACGTCGTCGTCTCCGAGATTGATTCAATGTCAGACGAAATGTTTAAAGATCTATTTTATGGTGGGATGGATGAGTACGAGTCTTTAGTTAGAGCTTTTGGGGTAACATCGGATTATTCGAATAATAATCATGAAATTTCGGGGACTCCCATGAATTCTTCTGGTTCCTTGTCGTCTTCTGATGCTGGAGCTGATCAGGAGGACGATTCTGTGAAAGAGAAGGATAAACAGATCAACAAAGATCATATGGAAGATGGAGGAGAGAGTTCTAAGGCAGCTGGATCAGGTAAATCATCAAAGAAGAAAGGAGAGAAGAAAGAGAGAGAAGCGAGAGTTGCTTTCATGACGAAGAGCGAGGTTGATCATCTTGAAGATGGATACAGATGGAGAAAGTATGGACAAAAGGCTGTCAAGAACAGTGCTTATCCTAGGAGCTATTACAGATGTACGACTCAGAAATGTGGAGTGAAAAAACGAGTAGAGAGATCCTTCGAAGATCCATCTATTGTAATTACGACTTACGAAGGTCAACACAACCACCCAATCCCGGCGACACTAAGGGGAAACCTGTCGGCGGCGAGCGGTGCCTTTCAGCCGTCCATGCTGGCACCAATGCCGGTGGTTGGCGGCGTCGGATTTCTCCCTGCAGAACTATTGAGCAATGCTTCCAGCAACAACAACCAGGCCGTCGGTGGCAGCGCATCCATTTATTCACATAGCAATTTCGACTATACTTATAATGGGCGGCAGTCGGAATTTGGGCTTCTGCAGGATATTTTTCCGGCTCCATCGTCGTTCTTCAACAGACAGCCGTGAGTTAATAATAAAGCCCTTTATGATCTATTAATTTACATAAAAATCCCCACCGGAGATTTTGATCACAATCTCTTGTATACTGTAAATATGGTTTTATTATACGGTTAATGGGTGGGATAAATTACATTACATTATATTGCATAGA 1016 43.01 MSDEMFKDLFYGGMDEYESLVRAFGVTSDYSNNNHEISGTPMNSSGSLSSSDAGADQEDDSVKEKDKQINKDHMEDGGESSKAAGSGKSSKKKGEKKEREARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSFEDPSIVITTYEGQHNHPIPATLRGNLSAASGAFQPSMLAPMPVVGGVGFLPAELLSNASSNNNQAVGGSASIYSHSNFDYTYNGRQSEFGLLQDIFPAPSSFFNRQP 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1132252 1134280 + XM_039027278.1 Bhi03g00044 28821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00044 262 ProSiteProfiles WRKY domain profile. 109 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g00044 262 MobiDBLite consensus disorder prediction 29 101 - -
Bhi03g00044 262 MobiDBLite consensus disorder prediction 86 101 - -
Bhi03g00044 262 SMART WRKY_cls 114 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g00044 262 MobiDBLite consensus disorder prediction 29 55 - -
Bhi03g00044 262 MobiDBLite consensus disorder prediction 56 79 - -
Bhi03g00044 262 SUPERFAMILY WRKY DNA-binding domain 106 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi03g00044 262 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 31 253 - -
Bhi03g00044 262 Gene3D WRKY domain 98 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi03g00044 262 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 253 IPR044810 GO:0003700
Bhi03g00044 262 Pfam WRKY DNA -binding domain 115 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00044 Bhi-Chr3:1132252 Bhi10g00984 Bhi-Chr10:20121290 7.61E-46 dispersed
Bhi03g00044 Bhi-Chr3:1132252 Bhi05g02037 Bhi-Chr5:62389375 2.08E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
512 PF03106 WRKY 8.20E-26 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00044 - - cmo:103484390 416.387