Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00050 CCTCTTCATCAAATTCATCCAGCAGCCTCTTCACATCATTTCATACCCATTTCGAATTCCTTCTGAATCATTCCAATGGCTGCCTCTACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGGCTGTGAAGCTCTCCCCCAACGCCCCTGAAATTCAGGGCAATGGAAGAATCAGCATGAGGAAGACTGCCAGCAAGTCAGTTTCCTCCGGCAGCCCATGGTATGGTCCCGACCGTGTCAAGTACTTGGGCCCATTCTCTGGCGAGCCACCGTCCTACCTCACCGGAGAGTTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCTGATCCCGAGACCTTCGCCAAGAACCGTGAGCTGGAAGTGATCCATTCCAGATGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCTGAGCTTCTGTCCCGCAATGGTGTGAAGTTTGGTGAAGCTGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGGCTCGACTACTTGGGCAACCCCAGCTTGATCCACGCACAGAGCATTTTGGCCATCTGGGCTTCCCAAGTTGTGTTGATGGGGGCCGTCGAGGGCTACCGTATTGCCGGCGGCCCGCTCGGGGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAAGTTAAGGAGCTCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGATTCTTCGTTCAGGCAATTGTTACAGGAAAGGGTCCATTGGAGAATTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCCACAAACTTTGTTCCCGGAAAGTGAGAGTCTTAGGATTCAGAGAGCGAGAAAGGAATTTGTGTTTGGTTGAACCATTGATGGTGGTGTAAATTTCGGGTTTGAACAATTGAGTATTTGATTTGAATGGACTTCATTTTGATTTTTCAGTAATAA 1002 51.9 MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1200443 1201444 + XM_039026125.1 Bhi03g00050 28827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00050 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Bhi03g00050 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Bhi03g00050 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Bhi03g00050 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Bhi03g00050 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00050 Bhi-Chr3:1200443 Bhi10g00982 Bhi-Chr10:20094722 0 dispersed
Bhi03g00049 Bhi-Chr3:1197771 Bhi03g00050 Bhi-Chr3:1200443 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00050 K08912 - cpap:110819729 532.332