Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00051 CTCCAATTTGCAGCCACTGTCGCAATCATCGTCGTGGAAAATCAATCATCAATTTCTTCAGTTCCCTACTGCAACTGCAAGGCGACCAACTCTTCAATGAAGTCGTCAGGTCAAAACCCAGCAGTTCCCAAATTTGGCCGCTTCTTCCAATTTGCTTTCACTCTCCATTCTCATACGTTGATTCACTGAAAACCGCGGTTCACATACAGCCAATTGACGTGCCTACTTGCAGCGTGCTAAGAATGACCGAACTCTCGATGATTTGGATTTACGTACGTTGCTTTCATAGTAGCAATGTCAAGTCAGCTTGGTTTTTTCTATGTTAGTTCGATAATCATCAACTTTCTCTATTTCAATGCTTTGAAAGTTCATATTCTATTTCTCTTGTATCTCTGTGGTCATTGATTGATTCTGCTGAGCTATACTTGTGACCTTTGTGATACTCCACGAGTCAGATTTTTGTTTCGTCATGGTATATAAATTCAAGTCTGTATAGAGAGAGCGAGAGGAATAGTACTTCAGGAAACAGTAACAATGGCTTCTAGCGTCAGTTTAGCCATTTTCATGATAGCTAGTTTTGTTCTAGTTAGGATTCTATTTGCCCAACACCAATCCGCCGTGGTCCAAGTTGAATTGGAAGCCTTAAAGGATTTCAAGCGTTCCATCCATTTCGACCCATTGGGAGCACTTGCAGATTGGACCGACCTTAACCACCACTGCAATTGGTCTGGCATTATCTGTGACTCTAATTCCAAAAGGGTCATTTCGATTACTTTGATTGATCAGCAGCTTGAAGGCGAGATTTCTCCGTTTATTGGGAACCTCTCAGCTCTCCAGGTTCTCGATTTAACTCAGAATTCGTTTACCGGGCACATTCCAGGTGAATTGGGTTCGTGTTCCAACCTTTCTCAGCTCATTCTTTACAGAAACTTTCTTTCAGGTCACGTTCCACCCCAGTTGGGAAACCTTGGGTTCCTGCAATATGTTGATTTGGGAAATAACTTCTTAAAGGGAAGCATTCCCGATAGCATTTGCAACTGCACAAACTTGTTAGCATTTGGTGTGGTATTTAATAATCTCACGGGCAGAATCCCATCAAACATAGGAAGCTTAGTCAATCTTCAAATTCTGGTTGCATACGTCAACAAGCTAGAAGGTTCCATTCCAGTCTCTATTGGCAAACTAGATGCACTGCAAAGTCTAGATCTTAGCCAGAACAACTTGTCTGGGAATATACCAGTGGAGATTGGGAATTTGTTGAATTTGGAGTATCTCCTATTGTTTGAGAATGCTTTGGTTGGGAAGATTCCTGAGGAGATAGGTAAATGTGAGAAGCTTCTTTCTTTGGAACTATACAACAATAAGTTCAGTGGTCCAATTCCTTCACAATTAGGCTCTCTGATTCGCTTACAAACCTTGCGTCTGTATACAAATAGATTAAACTCCACTATACCACAATCTCTCTTACATTTGAAAGGTTTAACCCATTTGCTTCTCTCAGAGAATAAGTTAAGTGGAACGATATCTTCTGGTATTGGATCTTTGAGATCATTGCAGGTTTTGACTCTTCACTCGAATAGATTTTTCGGGGTGATTCCGGCATCTTTGACAAACTTGTCAAACCTAACACATTTGTCTCTGAGCTTCAATTCATTCACAGGCGAGATTCCATCCAATTTAGGTTTGCTTCATAATCTGAAGAGATTGACATTGAGCAGCAATCTCCTAGCGGGTTCAATTCCATCTAGTATTACCAATTGCACCCAGCTTTCTATAATTGATCTTTCATTCAATAGGCTGACAGGGAAAATACCTTTAGGATACGGGAATTTGCAGAATCTTACTTCCCTCTTCCTTGGATCAAATAGGATTTTTGGTGAAATCCCAGATGACTTATTTAATTGTTCATCTCTTGAGATCGTAGATCTGGCTCTGAACAATTTCACTGGATTGTTAAAATCCAGTATTGGCAAGCTTTCCAATATTCAAGTTTTCAGAGCCGCATCAAATTCATTTTCTGGGGAAATTCCAGGGGATATTGGCAACTTAAGCAGACTCAACACATTAGTACTTGCAGATAATAAATTTTCAGGTCAAATTCCTGGGGAGTTGTCAAAGCTTTCTCTTCTTCAAGCTCTTTCTTTGCATGACAATGCATTGGAAGGAAGGATTCCTGAAAAAATATTTGATTTGATTCGACTGGTTCATCTTCATTTGCAGAACAACAAGTTCATTGGTCCAATTCCAGATGCCATCTCAAGACTAGAGTTTCTTTCATATTTGGACCTTCATGGAAACATGCTTAATGGAACGGTTCCTAAAAGTATGAGGAATCTTCATCGACTTGTGATGTTAGATCTGTCCCACAACCATCTATCTGGATCAATTCCTGGGGTCTTAATCTCAGGTATGAAAGATATGCAGCTATACATGAACTTGTCATACAATTTCCTGGTAGGAGGTATTCCAGCGGAGCTTGGGTTGTTGCAAATGATACAATCCATTGACTTCTCAAACAACAATCTCTCCGGGATTATTCCAGCAACGATCGGAGGTTGTAGGAATTTGTTCTTTCTTGATCTGTCAAGAAATGATCTTTCCGGTATGCTTCCAGGTAAAGCTTTTACTGGAATGAATATGCTCACGAACTTGAACCTTTCAAGGAACAAAATAGCTGGTGAAATCCCAGAAGAATTGGCAAATCTGGACCACTTGTACTCTTTGGACCTTTCTCAGAACAAGTTCAATGGCAGAATCCCTCAAAAACTTTCATCTCTGAAGTATGTTAACCTTTCCTTTAATCAACTAGAAGGTCCTGTTCCGGACACTGGAATATTTCAAAAAATAAATGTTTCAAGCTTGATAGGAAATCCTGCTCTTTGTGGGTTCAAGTCCTTTGCTCCTTGTGGAAAGAAGTATTTGCGACATCTATCAAAAAAGACCTTACTGATTCTCATAACCCTTGGATCTTGTATTGTACTCTTAGCTATAGTTTTCTTAATTCTAGGCTTCAACCGATATGGTAAGCTTGAGAAATCTAAAAGTATTGAGAATCCTGAACCATCGTTGGAGTATAAATGTACCCTTAAGAGGTTTGATAAGAAGGATATGGAGATTGCAACAGAATACTTCAGCGATGAAAACATTCTAGGTTCCAGTACTTTAAGCACTGTCTACAGGGGTCAACTGGACGATGGACAGATTGTAGCTGTAAAAAGATTGAATTTGCAATATTTCTCTGCAGAATCATATGATTACTTCAGTAGAGAAATCAAGATTCTTTGTCAACTTAGACATAGGAATTTGGTGAAAGTACTCGGATATGCTTGGGAAAGCCAGAAGCTGAAGGCTATCGTTCTTGAATACATGGAAAATGGGAACTTGGATAGAATAATACATGAACCTGGAACAGATCAATTGAGTTGTTCATTGTCAATGAGGATCGATATTTGCGTTTCTGTTGCCAGTGGGGTGCAATACCTGCATTATGGATATGACTTTCCCATCATTCACTCTGACTTGAAACCTTCAAACATCCTTCTTGATGGAGACTGGGTAGCCCATGTGAGCGATTTTGGAACTGCTAGAGTGTTGGGGGTGCAAAGCCAAGACACAAGCAGTATTTCCTCTTCAGCAGCTTTTGAAGGCACTATCGGATATTTGGCTCCAGAGTTTGCATACATGGGGAAAGTGACAACGAAAGTAGACGTGTTCAGTTTTGGTATAATACTGATGGAATTTCTGACAAAGAAAAGGCCAACTGCCACCATTGAAGCTCATGGACTCCCAATCAGCTTGCAGCAACTGGTAGAGAGAGCTCTAGCAAATGGAAAGGAAGAACTTAGTCAAGTTTTGGATCCTGTGCTGGTCTTGAATGATTCGAAGGAGCAAAGAAGGTTGGAAAAACTGCTCAAACTAGCACTAAGCTGTACCGACCAAAATCCTGAGAATAGACCTGACATGAATGAAGTTCTGTCTATCCTTTTAAAGTTGCAGAGAGATGAATAGTAGATTTAAATGTATAAATATTAGTACTGACAATTATACTGTCTTATATTGTTTTTTTCGTAAATGAGTAACGCCAAATTTTAGTTATAAACTTGTGACTTATGAGTTCAATGGATTCCTATGCTTAACAGTAGACTTAAATGATCATTATGCTCTAATAAGTTTTAAGTTAATTCATTTATAGTTATAGAACTGATTCCCAGAGTTTCAAGACTATATGCATTATTCATTTCCAGGAATGACAATTTAAATTGGTGTATGCGACTCCAGTGCTCATCCTTTCATTAAATAGATAATCTCTTTGTTATTACTGAAAAATCAAAATGAAGTCCATTCAAATCAAATACTCAATTGTTCAAACCCGAAATTTACACCACCATCAATGGTTCAACCAAACACAAATTCCTTTCTCGCTCTCTGAATCCTAAGACTCTCACTTTCCGGGAACAAAGTTTGTGGCATAGGCCCAAGCATTGTTGTTGACTGGGTCAGCAAGGTGGTCAGCCAAATTCTCCAATGGACCCTTTCCTGTAACAATTGCCTGAACGAAGAATCCAAACATGGAGAACATGGCCAACCTTCCATTCTTGAGCTCCTTAACTTTCAATTCAGCGAAGGCCTCTGGGTCATCAGCCAGACCCAATGGGTCGAAGCTTC 4665 39.55 MASSVSLAIFMIASFVLVRILFAQHQSAVVQVELEALKDFKRSIHFDPLGALADWTDLNHHCNWSGIICDSNSKRVISITLIDQQLEGEISPFIGNLSALQVLDLTQNSFTGHIPGELGSCSNLSQLILYRNFLSGHVPPQLGNLGFLQYVDLGNNFLKGSIPDSICNCTNLLAFGVVFNNLTGRIPSNIGSLVNLQILVAYVNKLEGSIPVSIGKLDALQSLDLSQNNLSGNIPVEIGNLLNLEYLLLFENALVGKIPEEIGKCEKLLSLELYNNKFSGPIPSQLGSLIRLQTLRLYTNRLNSTIPQSLLHLKGLTHLLLSENKLSGTISSGIGSLRSLQVLTLHSNRFFGVIPASLTNLSNLTHLSLSFNSFTGEIPSNLGLLHNLKRLTLSSNLLAGSIPSSITNCTQLSIIDLSFNRLTGKIPLGYGNLQNLTSLFLGSNRIFGEIPDDLFNCSSLEIVDLALNNFTGLLKSSIGKLSNIQVFRAASNSFSGEIPGDIGNLSRLNTLVLADNKFSGQIPGELSKLSLLQALSLHDNALEGRIPEKIFDLIRLVHLHLQNNKFIGPIPDAISRLEFLSYLDLHGNMLNGTVPKSMRNLHRLVMLDLSHNHLSGSIPGVLISGMKDMQLYMNLSYNFLVGGIPAELGLLQMIQSIDFSNNNLSGIIPATIGGCRNLFFLDLSRNDLSGMLPGKAFTGMNMLTNLNLSRNKIAGEIPEELANLDHLYSLDLSQNKFNGRIPQKLSSLKYVNLSFNQLEGPVPDTGIFQKINVSSLIGNPALCGFKSFAPCGKKYLRHLSKKTLLILITLGSCIVLLAIVFLILGFNRYGKLEKSKSIENPEPSLEYKCTLKRFDKKDMEIATEYFSDENILGSSTLSTVYRGQLDDGQIVAVKRLNLQYFSAESYDYFSREIKILCQLRHRNLVKVLGYAWESQKLKAIVLEYMENGNLDRIIHEPGTDQLSCSLSMRIDICVSVASGVQYLHYGYDFPIIHSDLKPSNILLDGDWVAHVSDFGTARVLGVQSQDTSSISSSAAFEGTIGYLAPEFAYMGKVTTKVDVFSFGIILMEFLTKKRPTATIEAHGLPISLQQLVERALANGKEELSQVLDPVLVLNDSKEQRRLEKLLKLALSCTDQNPENRPDMNEVLSILLKLQRDE 1157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1201092 1206000 - XM_039026120.1 Bhi03g00051 28828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00051 1157 Pfam Protein kinase domain 867 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00051 1157 SUPERFAMILY L domain-like 252 547 - -
Bhi03g00051 1157 SUPERFAMILY L domain-like 33 307 - -
Bhi03g00051 1157 SUPERFAMILY Protein kinase-like (PK-like) 841 1151 IPR011009 -
Bhi03g00051 1157 Pfam Leucine rich repeat 338 398 IPR001611 GO:0005515
Bhi03g00051 1157 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
Bhi03g00051 1157 Pfam Leucine rich repeat 692 737 IPR001611 GO:0005515
Bhi03g00051 1157 Gene3D Ribonuclease Inhibitor 696 798 IPR032675 -
Bhi03g00051 1157 Gene3D Ribonuclease Inhibitor 473 695 IPR032675 -
Bhi03g00051 1157 Gene3D Ribonuclease Inhibitor 314 472 IPR032675 -
Bhi03g00051 1157 Gene3D Ribonuclease Inhibitor 30 311 IPR032675 -
Bhi03g00051 1157 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 289 380 - -
Bhi03g00051 1157 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 367 1153 - -
Bhi03g00051 1157 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 11 297 - -
Bhi03g00051 1157 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515
Bhi03g00051 1157 SMART serkin_6 866 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00051 1157 PRINTS Leucine-rich repeat signature 220 233 - -
Bhi03g00051 1157 PRINTS Leucine-rich repeat signature 601 614 - -
Bhi03g00051 1157 ProSiteProfiles Protein kinase domain profile. 866 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00051 1157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 991 1003 IPR008271 GO:0004672|GO:0006468
Bhi03g00051 1157 SMART LRR_typ_2 337 360 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 675 699 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 651 674 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 97 121 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 433 457 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 385 409 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 145 169 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 745 770 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 529 553 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 289 313 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 361 384 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 601 625 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 217 241 IPR003591 -
Bhi03g00051 1157 SMART LRR_typ_2 700 724 IPR003591 -
Bhi03g00051 1157 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Bhi03g00051 1157 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 289 380 - -
Bhi03g00051 1157 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 297 - -
Bhi03g00051 1157 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 367 1153 - -
Bhi03g00051 1157 SMART LRR_sd22_2 385 411 - -
Bhi03g00051 1157 SMART LRR_sd22_2 217 236 - -
Bhi03g00051 1157 SMART LRR_sd22_2 577 603 - -
Bhi03g00051 1157 SMART LRR_sd22_2 433 456 - -
Bhi03g00051 1157 SMART LRR_sd22_2 700 726 - -
Bhi03g00051 1157 SMART LRR_sd22_2 361 384 - -
Bhi03g00051 1157 SMART LRR_sd22_2 313 336 - -
Bhi03g00051 1157 Gene3D Transferase(Phosphotransferase) domain 1 945 1157 - -
Bhi03g00051 1157 SUPERFAMILY L domain-like 476 805 - -
Bhi03g00051 1157 Gene3D Phosphorylase Kinase; domain 1 829 944 - -
Bhi03g00051 1157 CDD STKc_IRAK 872 1153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01715 Bhi-Chr2:47221795 Bhi03g00051 Bhi-Chr3:1201092 5.78E-60 dispersed
Bhi03g00051 Bhi-Chr3:1201092 Bhi08g01545 Bhi-Chr8:44372402 0 dispersed
Bhi03g00886 Bhi-Chr3:16597365 Bhi03g00051 Bhi-Chr3:1201092 1.11E-160 dispersed
Bhi03g00051 Bhi-Chr3:1201092 Bhi08g01644 Bhi-Chr8:46498944 1.67E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87510 PF00069 Pkinase 5.80E-43 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00051 K13420 - csv:101215973 1945.63