Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00057 CGCCGAGCTTTGACCAATGGTTTCGTTTCGTCATCTGTAAACTGCAAAACTCAAGGTCGAAGAGAAATGGCGGGACTGAGAAGACTGGCGCAATTGAAACCCATAGCCGAAGAAGCATTGGCTGGAACAGTTTTCGTAGCGAAGTTTCTCTGTGGCCTTCATGTTGCCAACACTTACATCTGCACAGCTGCTCTCACCTATGGTCCTAGCATGCTCCCTACTCTAAACCTAACCGGCGATTTCATCTTGGCCGACCGACTCTCCACTCGCTTTGGCAGAGTCGGCGTCGGAGACATTGTCCTCGTGAAGTCTCCTGAAAACCCTCGTAAAGTAATGGCGAAGCGTTTGATGGGTATGGAGGGTGATTCTGTTACCTATGTTGTAGACCCGAAGAACAGTGATTGGTGCGAAACTGTTGTGGTTCCTAAAGGGCATGTTTGGATAGAGGGAGATAATATCTATGATTCAAATGATTCGAGACATTTTGGGGCCGTACCATATGGTCTTCTGCAAGGGAAAATATTTTGGAGAATATGGCCACCTAAAAGTTTTGGACCTTTGGAGAAGAGAAAATCAAACGAGACCATCTTGTGAGATCCTATTTCGCAGTTATCGCTCATCAATGTCGACATCGATGATTTACGCAGAAGGTGGCTCGAAATTCTTCATAATCCCTCTATTATAGCCTCTGGAAGGATTTCTTCTAGATTTCATAATTTGTACAATTGAAATTGAAGCCTTGCTGACTAAACGTTCCCAATCACTTCACTTCAGCATAATAAATCATTTAGTAAATGTTTTCGAGTCGCATGTAGCTTTAAACGATGATGGAATGGAATTGATAGACAGATTCTTGAAGAATGTAACATTTTTTCTATTTTTTAGTGAGAGGATGACAGTAATTTAAATTGATAGCAAA 919 42.33 MAGLRRLAQLKPIAEEALAGTVFVAKFLCGLHVANTYICTAALTYGPSMLPTLNLTGDFILADRLSTRFGRVGVGDIVLVKSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDWCETVVVPKGHVWIEGDNIYDSNDSRHFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETIL 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1426258 1429731 + XM_039027055.1 Bhi03g00057 28834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00057 175 CDD S26_SPase_I 46 152 IPR019533 GO:0004252|GO:0006465
Bhi03g00057 175 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 4 168 - -
Bhi03g00057 175 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bhi03g00057 175 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bhi03g00057 175 PRINTS Bacterial leader peptidase 1 (S26A) family signature 119 138 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bhi03g00057 175 Pfam Signal peptidase, peptidase S26 31 104 IPR019533 GO:0004252|GO:0006465
Bhi03g00057 175 Pfam Signal peptidase, peptidase S26 116 157 IPR019533 GO:0004252|GO:0006465
Bhi03g00057 175 SUPERFAMILY LexA/Signal peptidase 36 165 IPR036286 -
Bhi03g00057 175 Gene3D Umud Fragment, subunit A 34 170 - -
Bhi03g00057 175 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 4 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03124 Bhi-Chr1:78928177 Bhi03g00057 Bhi-Chr3:1426258 7.92E-75 dispersed
Bhi03g00057 Bhi-Chr3:1426258 Bhi05g00394 Bhi-Chr5:7761972 1.22E-22 dispersed
Bhi09g01226 Bhi-Chr9:29423323 Bhi03g00057 Bhi-Chr3:1426258 9.40E-08 dispersed
Bhi03g00057 Bhi-Chr3:1426258 Bhi09g03385 Bhi-Chr9:86164896 2.34E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00057 K09647 - csv:101209167 322.398