Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi03g00057 | CGCCGAGCTTTGACCAATGGTTTCGTTTCGTCATCTGTAAACTGCAAAACTCAAGGTCGAAGAGAAATGGCGGGACTGAGAAGACTGGCGCAATTGAAACCCATAGCCGAAGAAGCATTGGCTGGAACAGTTTTCGTAGCGAAGTTTCTCTGTGGCCTTCATGTTGCCAACACTTACATCTGCACAGCTGCTCTCACCTATGGTCCTAGCATGCTCCCTACTCTAAACCTAACCGGCGATTTCATCTTGGCCGACCGACTCTCCACTCGCTTTGGCAGAGTCGGCGTCGGAGACATTGTCCTCGTGAAGTCTCCTGAAAACCCTCGTAAAGTAATGGCGAAGCGTTTGATGGGTATGGAGGGTGATTCTGTTACCTATGTTGTAGACCCGAAGAACAGTGATTGGTGCGAAACTGTTGTGGTTCCTAAAGGGCATGTTTGGATAGAGGGAGATAATATCTATGATTCAAATGATTCGAGACATTTTGGGGCCGTACCATATGGTCTTCTGCAAGGGAAAATATTTTGGAGAATATGGCCACCTAAAAGTTTTGGACCTTTGGAGAAGAGAAAATCAAACGAGACCATCTTGTGAGATCCTATTTCGCAGTTATCGCTCATCAATGTCGACATCGATGATTTACGCAGAAGGTGGCTCGAAATTCTTCATAATCCCTCTATTATAGCCTCTGGAAGGATTTCTTCTAGATTTCATAATTTGTACAATTGAAATTGAAGCCTTGCTGACTAAACGTTCCCAATCACTTCACTTCAGCATAATAAATCATTTAGTAAATGTTTTCGAGTCGCATGTAGCTTTAAACGATGATGGAATGGAATTGATAGACAGATTCTTGAAGAATGTAACATTTTTTCTATTTTTTAGTGAGAGGATGACAGTAATTTAAATTGATAGCAAA | 919 | 42.33 | MAGLRRLAQLKPIAEEALAGTVFVAKFLCGLHVANTYICTAALTYGPSMLPTLNLTGDFILADRLSTRFGRVGVGDIVLVKSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDWCETVVVPKGHVWIEGDNIYDSNDSRHFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETIL | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1426258 | 1429731 | + | XM_039027055.1 | Bhi03g00057 | 28834 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi03g00057 | 175 | CDD | S26_SPase_I | 46 | 152 | IPR019533 | GO:0004252|GO:0006465 | |
Bhi03g00057 | 175 | PANTHER | PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN | 4 | 168 | - | - | |
Bhi03g00057 | 175 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 37 | 53 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Bhi03g00057 | 175 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 90 | 102 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Bhi03g00057 | 175 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 119 | 138 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Bhi03g00057 | 175 | Pfam | Signal peptidase, peptidase S26 | 31 | 104 | IPR019533 | GO:0004252|GO:0006465 | |
Bhi03g00057 | 175 | Pfam | Signal peptidase, peptidase S26 | 116 | 157 | IPR019533 | GO:0004252|GO:0006465 | |
Bhi03g00057 | 175 | SUPERFAMILY | LexA/Signal peptidase | 36 | 165 | IPR036286 | - | |
Bhi03g00057 | 175 | Gene3D | Umud Fragment, subunit A | 34 | 170 | - | - | |
Bhi03g00057 | 175 | PANTHER | PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED | 4 | 168 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi01g03124 | Bhi-Chr1:78928177 | Bhi03g00057 | Bhi-Chr3:1426258 | 7.92E-75 | dispersed | |
Bhi03g00057 | Bhi-Chr3:1426258 | Bhi05g00394 | Bhi-Chr5:7761972 | 1.22E-22 | dispersed | |
Bhi09g01226 | Bhi-Chr9:29423323 | Bhi03g00057 | Bhi-Chr3:1426258 | 9.40E-08 | dispersed | |
Bhi03g00057 | Bhi-Chr3:1426258 | Bhi09g03385 | Bhi-Chr9:86164896 | 2.34E-12 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi03g00057 | K09647 | - | csv:101209167 | 322.398 |