Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00103 GCGCCTTGCCTATAGCGAATTCACATGTTTTGAATTCGAAGGACGACTCCTTTAGTCAAACCTCTGATTTGGATGCTTCTTCTCATCGATTAAACTCAAATTTCCCACTTGCCCATCAATCATCATCTTCAATCATTCGAGCGCCAAAATACCCAGATTCTTCCCGAGAGATTATAGTCTCCACCGACCACCGCGATTGTTTATTGCGCCGGCACATGCAGAATTTACTCATTCCATGTTCCAAAACCTGATTTATAGTTATGGGATTTTCGTTTCATTGATTTACCACAACCCCATGTGCTCGGCTTTCGATCGTTGTCCTAGAATCGCCCCATCACCATCTTTAGCTTTTGAGAAATCTTTCGATTGAGATTGATTCGAGAAAAAGTAGTTTGTGTTCGTTCATTGGTTTCGTCGTTCTCGTTTCGTTTGCCGATTGAAGAGGGAAGATGAGTGTGGTTAAGTCTCAGGTATGGCAACCGTGTAAGAAGAAGAGGTCTTGATCGGGGGATTTTATAGGGAGGAAGGGGATTGAGGGGGCGAAGGAGTTAAAATTGGAGACAGATATGGCTTCCAGGTCCAACAGTCATAGCAAAACGCGGGTGGGGAGATACGAGCTGGGACGAACCCTTGGAGAAGGCAGCTTCGCCAAGGTTAAGTTCGCTCGGAATTGCGAGACAGGGGAGAACGTAGCCATCAAAATCCTCGACAAAGAGAATATTCTCAAACACAAGATGATCGGGCAGATTAAACGTGAAATATCCACTATGAAACTCATTAGACATCCAAATGTCATTCGGATGTATGAGGTGATGGCTAGCAAGACCAAGATATATATTGTTTTGGAATTTGTAACTGGTGGAGAACTATTCGCTAAAATTGCATGTAATGGAAGATTGAAAGAAGATGAAGCAAGAAAGTATTTTCAGCAGTTAATAAATGCAGTGGATTATTGCCATAGCAGAGGTGTTTGTCATCGAGACCTAAAGCCAGAGAATTTATTATTGGATGCTAGTGGTGTTCTAAAAATTTCAGATTTTGGATTGAGTGCTCTACCGCAACAAATTCGAGGTGATGGATTACTTCACACAACATGTGGAACTCCCAATTATGTTGCTCCAGAGGTTATCAACAATAAGGGGTACTACGGAGCAAAGGCTGACCTATGGTCATGTGGGGTTATCCTTTTTGTCCTCATGGCAGGCTACTTGCCGTTTGAAGACTCCAATCTCATGGCGTTGTATAAAAAGATATTCAAGGCAGACTTCACATGTCCTCCATGGTTCTCCTCCGGTGCCAAGAAATTAATCAAGAGAATTCTGGATCCGAATCCATTAACTAGAATTACAATTGCTGAAGTCCTTGAGAATGATTGGTTTAAGAAAGGATACAAGCCACCCACTTTTGAAAATGCCGAAATCAGTCTTGATAACGTTGATGACATCTTTAATGAATCAGGGGCTTCTGATAATCTTGTTGTTGAGAGGAGAGAAGATAGATCTGCATCACTTGCATCACCTGTCACCATGAATGCATTTGAGCTCATCTCGAAATCTCGGGGTCTCAACCTTGCCACTCTTTTTGAGAAGCAAATGGGGATAATTAAACGTGAAACAAGATTCACATCCAATTGTCCGGCAGATGAAATTATTTCGAAGATAAAAAACACTGCTGTTCCGTTGGGTTTTGATGTGAAGATTAATAACTTCAAGATGAAGCTCCAAGGGGAAAAAACTGGACGCAAAGGTCATTTATCAGTTGCAACAGAGATTTTTCAGGTTGCGCCTTCGTTGCATATGGTGGAGCTTCGAAAAGCTGGAGGCGATACTTTAGAATTTCAAATGTTCTATAATAACCTCTCAACTGGACTAAAAGATATTGTATGGAAGTACGGAGACGAGATGGAGCAGGAAAGTAACGGTGCGGATCGTTGAAAATTCTATGTAATCCCCCCCTCCCCCCCCCCCCAAGGAAGGAAGGGTGAGTGAAAGAGAGAGAGGGGGGGAAAAGAAAAGGAATGTTCATCTTAGGGCATTTGAAATAGTTTGGGATAGTAATAGTATGATGATGAAATGACTCGTTCCTTATTACTGCAGCTAAATTTTACATTCTTTTTCATAGGGATAATCATTTTCGTTTCCCGTTTTATTATTTTTTGTTTTTGAAATAGTTTGGGATAGTAATAGTATGATGATGAAATGATTCGTTCCTTATTA 2216 41.25 MASRSNSHSKTRVGRYELGRTLGEGSFAKVKFARNCETGENVAIKILDKENILKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFAKIACNGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDASGVLKISDFGLSALPQQIRGDGLLHTTCGTPNYVAPEVINNKGYYGAKADLWSCGVILFVLMAGYLPFEDSNLMALYKKIFKADFTCPPWFSSGAKKLIKRILDPNPLTRITIAEVLENDWFKKGYKPPTFENAEISLDNVDDIFNESGASDNLVVERREDRSASLASPVTMNAFELISKSRGLNLATLFEKQMGIIKRETRFTSNCPADEIISKIKNTAVPLGFDVKINNFKMKLQGEKTGRKGHLSVATEIFQVAPSLHMVELRKAGGDTLEFQMFYNNLSTGLKDIVWKYGDEMEQESNGADR 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2833097 2838787 + XM_039027610.1 Bhi03g00103 28880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00103 455 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bhi03g00103 455 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Bhi03g00103 455 Gene3D Kinase associated domain 1, KA1 316 441 - -
Bhi03g00103 455 CDD STKc_SnRK3 15 270 - -
Bhi03g00103 455 CDD CIPK_C 322 437 - -
Bhi03g00103 455 SUPERFAMILY Protein kinase-like (PK-like) 13 280 IPR011009 -
Bhi03g00103 455 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00103 455 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00103 455 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 446 - -
Bhi03g00103 455 Gene3D Transferase(Phosphotransferase) domain 1 96 278 - -
Bhi03g00103 455 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00103 455 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Bhi03g00103 455 PANTHER SERINE/THREONINE KINASE 9 446 - -
Bhi03g00103 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bhi03g00103 455 Pfam NAF domain 318 377 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00103 Bhi-Chr3:2833097 Bhi08g02035 Bhi-Chr8:58659804 0 dispersed
Bhi03g00103 Bhi-Chr3:2833097 Bhi03g00104 Bhi-Chr3:2834196 0 tandem
Bhi03g00103 Bhi-Chr3:2833097 Bhi08g02033 Bhi-Chr8:58659791 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87511 PF00069 Pkinase 6.50E-74 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00103 - - csv:101214052 867.07