Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00153 TACACAACAAAAAGTCTAATATCATACATTCATCTCGTGAACATCTGTTGTTAAAGAGATTGGGGGAAAGCAAGAAAGAACGATGGTTCTTTCTTCTGAGTTCTGAGCTCTGACTGTTTTGTTTTTTTTTTTTTTTGTTTAGAGAGATTAGTGAGAGAGAGGAAGATGAACAGTACCCATTTGTTCAAAAGAAACGTTCTCTCTGCCTTCTGTGTATATGTGAGTGACAGGCTTTAAATAAAACAAATGCCCTTCTCAGTCCTTCTGACTCTGCCTCCTCTCAATTAATCCTTCTTTTTTTCTTTTTCTTTTGAAATTTCACATCACTCAGTGGGAAGAAAGTGGGATTTTTCAATTTTTATTTCTGCAGAAAAACCCAGAGAGAGAAAAGTTGGGAAAAGGAATTTGGCCACCTGGCCTTTGGATTTCCATTGGATGTTTGTTTTCTTCTGTTTATACTTTCTCTGTCCACTTACAAACCCACAATTCCTCAACCTCAAACAACCCCTCACCTCATTTTCTTTTTCCATTTATTCAAATTTTGTTTCTCTCTCTCTGTTGGGTTGGTTTTGTTATTTGGGTTTTTGTTATTCCTTTTCTTTTCCTCTTCTTTGTGTTTTAAGTCCTCGAAATTGGTGTTTTTTTGGTGGTAAAGACCAAAGGACTCTGTTCATGCTCTTCTTCAACCTGTGTGCTTTGAGGAAGAAGCAGAGCACTAACTGATGAAGGAGAGAGGAGGCTCTCTTGGAGGAGAGAGCCTGCCCGGTAAAAAGACTAACAGCAACACCAACACCGCTAAAGAAGAAGAACAAGACGACCCTAAAACTCCATTTTGTTAACTTCCCATTTTCCCTTAGCAAAAAAATCTAGTTCTTGAGGCTCTCCTTTTGGTGGGTTTTGAATCTTTTGAGCTTTGAAATCTTTCGTTTGCCTCTTTGTTCGAGTTTGCTGTTAAAGGTACATGGCGCTTGTTATCCACAAAGATTCATCAAACAAACAAATGGATTCAAGCAAATACGTACGGTATACACCCGAGCAAGTTGAGGCATTAGAGAGAGTTTATGCAGAATGTCCGAAGCCTAGTTCTCTCAGAAGGCAGCAGCTCATTAGAGAGTGCCCAATCCTTTCTAACATTGAGCCTAAACAGATCAAAGTTTGGTTTCAAAATCGCAGATGCCGTGAGAAGCAGAGGAAGGAATCATCTCGCCTCCAGAGCGTAAACAGAAAGTTGTCTGCGATGAACAAATTGTTGATGGAGGAGAATGACCGTTTACAGAAGCAGGTGTCTCATTTGGTATATGAGAATGGATTTATGCGCCAGCAACTGCATAATGCATCTGGAACAACTACAGACAATAGCTGTGAGTCTGTAGTCATGAGCGGTCAGTCTCAACAACAGCAAAATCCAAATCCTCAGCATCCTAATAAGGATGTTAACAACCCAGCTGGTCTTCTCGCGGTAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACAGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAATTGCAGTGGGGTAGCAGCGCGAGCCTGTGGTCTTGTTAGTCTAGAGCCGACAAAGGTTGCAGAAATTCTCAAAGATCGCCTTTCATGGTATCGTGACTGCCGCTGTCTTAATGTATTAAGTGTAATTCCTACGGGAAATGGGGGAACAATAGAGCTCATATATATGCAGACTTACGCTCCAACGACATTAGCAGCAGCACGTGACTTCTGGACTATGAGATATACAACAAGTCTAGATGATGGCAGTCTAGTGGTTTGTGAGAGGTCATTATCTTCTTCAAGTGGTGGCCCAGCAGGGCCTCCGCCATCTACTTTTGTAAGAGCCGAGATGCTTCCTAGTGGCTATTTAATAAGAGCGTGCGAGGGCGGTGGATCAATTATTCACATTGTTGATCATGTTGATTTGGATGTTTGGAGTGTCCCTGAAGTTCTTAGGCCACTTTATGAGTCATCCAAGATCCTTGCTCAGAAAATGACAATTTCTGCATTGCGTCACATTAGACAAATTGCACAAGAGACTAATGGAGAGATTCAATGTACTGGCGGACGTCAACCAGCTGTACTACGGATGTTTAGTCAAAAACTTTGCAGGGGTTTCAACGACGCTATCAATGGGTTTGCTGATGATGGTTGGTCACCTATGGGCAGTGATGGTGTGGAGGACGTGACAATTGTGATAAACTCATCAGCAAACAAGTTTCCTGGATCCCAGTATAACACATCTTTGTATCCCTCTTTTGGCGGAGGAGTCATGTGTGCAAAAGCGTCAATGTTGCTTCAGAATGTTCCCCCTGCTTTGCTTGTTCGATTCCTGAGAGAGCATCGGTCTGAATGGGCTGATTATGGAGTTGATGCGTACTCTGCTGCAAGTTTAAAAGCCAGTCCATATGCTGTTCCTTGTGCAAGGCCCGGTGGCTTCCCTAGCAGCCAGGTTATTTTGCCTCTGGCTCCTACTGTGGAACATGAGGAGTTTTTGGAGGTGGTTCGGCTGGAGGGCCTTGCATTCTCTCCTGAAGATGTTGCTTTGGCTGGACGAGATATGTACTTATTGCAGCTCTGTAGTGGGGTCGATGAGAATGCAGTTGGAGCTTGTGCTCAGCTTGTGTTTGCACCTATAGATGAATCTTTTGCTGATGATGCTCCACTACTTACTTCAGGGTTTCGTGTCATACCGCTGGATCAGAAAACGGATGAACCTACTGCTGCTCGAACATTGGATTTGGCGTCTACACTTGAAGTTGGTGCCAATGCTGCACGTTCTGCTGGTGAAACTGATTTGAGCAGCTACAACCTTCGTTCAGTCTTGACCATTGCTTTCCAGTTCACCTTTGAGAATCACTTACAAGAAAATGTGGCTGCTATGGCCCGACAGTACGTTCGTAGTGTTGTAGGGTCTGTTCAAAGGGTTGCCATGGCCATTTCCCCTTCGCGGTTGAGTTCCAATATGGGACTAAAACCTCTTCCTGGTTCCCCTGAAGCTCTCACTTTGGCTCGATGGATTTGCCGAAGCTACAGGATCCATGTTGGAGCTGATCTCCTTCAAGCCGATTCCCAGTCCGGGGATGCCATGTTGAAGCAGCTTTGGCACCACTCCGATTCAATCATGTGTTGCTCCGTCAAAACCAACGCATCTGCTGTGTTCACCTTTGCTAACCAGGCTGGTCTGGACATGCTTGAAACCACTCTTGTTGGCCTGCAAGATATAATGCTCGACAAAATTCTCGATGAGGCGGGTCGGAAGATTCTCTGTTCCGAGTTCCCCAAGATAATGCAGCAGGGGTTTGCAAATCTTCCCTCGGGCATCTGCGTATCCAGTATGGGTCGTCCCATTTCTTATGAGCAAGCAGTTGCCTGGAAGGTTCTGAATGATGATGATTCCAATCACTGTCTAGGTTTCATGTTCATAAACTGGTCCTTTGTTTGACGGGGAAGAAGCGTGACTTTGTTAACATTATCAAGTAGTGGGATTGTAATTCAACATAGAACATGATGTCTTTCTTTTACTGCAGGACTTCTTGACTTAAGGTCTTTTGCTGTTCTTCCTTTTTGGTTGGGAAAACAAATATGCTTAAGCTTAGCTAGCTATTTGGACCCTTTGTTTTCAACCTAGACACCATGACTTAATGTCGTTAATTTCATCAACATTATTATGCTGTGTGAGGTTATTTTTCTGCTCAAGGATCATCTGTCTTTGTATA 3779 43.87 MALVIHKDSSNKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQSVNRKLSAMNKLLMEENDRLQKQVSHLVYENGFMRQQLHNASGTTTDNSCESVVMSGQSQQQQNPNPQHPNKDVNNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRLSWYRDCRCLNVLSVIPTGNGGTIELIYMQTYAPTTLAAARDFWTMRYTTSLDDGSLVVCERSLSSSSGGPAGPPPSTFVRAEMLPSGYLIRACEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTISALRHIRQIAQETNGEIQCTGGRQPAVLRMFSQKLCRGFNDAINGFADDGWSPMGSDGVEDVTIVINSSANKFPGSQYNTSLYPSFGGGVMCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLAPTVEHEEFLEVVRLEGLAFSPEDVALAGRDMYLLQLCSGVDENAVGACAQLVFAPIDESFADDAPLLTSGFRVIPLDQKTDEPTAARTLDLASTLEVGANAARSAGETDLSSYNLRSVLTIAFQFTFENHLQENVAAMARQYVRSVVGSVQRVAMAISPSRLSSNMGLKPLPGSPEALTLARWICRSYRIHVGADLLQADSQSGDAMLKQLWHHSDSIMCCSVKTNASAVFTFANQAGLDMLETTLVGLQDIMLDKILDEAGRKILCSEFPKIMQQGFANLPSGICVSSMGRPISYEQAVAWKVLNDDDSNHCLGFMFINWSFV 847
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3787759 3794254 - XM_039027081.1 Bhi03g00153 28930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00153 847 CDD homeodomain 18 78 IPR001356 GO:0003677
Bhi03g00153 847 MobiDBLite consensus disorder prediction 124 157 - -
Bhi03g00153 847 Coils Coil 83 107 - -
Bhi03g00153 847 SUPERFAMILY Homeodomain-like 17 79 IPR009057 -
Bhi03g00153 847 MobiDBLite consensus disorder prediction 124 160 - -
Bhi03g00153 847 CDD bZIP 70 109 - -
Bhi03g00153 847 Gene3D - 9 85 - -
Bhi03g00153 847 Gene3D - 200 385 IPR023393 -
Bhi03g00153 847 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Bhi03g00153 847 Pfam START domain 167 374 IPR002913 GO:0008289
Bhi03g00153 847 ProSiteProfiles START domain profile. 157 385 IPR002913 GO:0008289
Bhi03g00153 847 SMART HOX_1 15 81 IPR001356 GO:0003677
Bhi03g00153 847 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Bhi03g00153 847 SMART START_1 166 376 IPR002913 GO:0008289
Bhi03g00153 847 Pfam MEKHLA domain 702 846 IPR013978 -
Bhi03g00153 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 847 IPR044830 GO:0003700
Bhi03g00153 847 SUPERFAMILY Bet v1-like 167 378 - -
Bhi03g00153 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 847 - -
Bhi03g00153 847 CDD START_ArGLABRA2_like 161 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00153 Bhi-Chr3:3787759 Bhi08g01032 Bhi-Chr8:33672938 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
523 PF01852 START 1.30E-48 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00153 K09338 - csv:101210154 1634.77