Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00156 CATTTCTCTCAAAGTTACAAACCGCCCCTTCTCCCACCCCCAACAAAAAAAAAAAAAAAAATAAATAATAAAACAGAAAATATTTTTTAAAAAAAAGAGGGTGGAAGAAGAGAGTTCTGCAAATTTCAATCATCCACATCAACAGGGTATTGAAGATTCAGATTTTCCGACCCAATCCCTTTTTTTCTCCATTTCTCATCGGCGATTTTGTTCAAGCATCGATCTCACCGGGATTTGTTGGATGATCGTCTATTACTGGCGGAGCAATGAATAATCGCACAATGGAACTTGGGAGGCCTGGCTCAGGCAAAAGAAGATTAAGGGACCTATTGCTTCTAAAGGATAATCGCTTTTGTGCAGATTGTCGCGCTGCAGATCCTAAATGGGCGTCAGCAAATATTGGAGTTTTTATATGCTTGAAATGTTGTGGTGTTCACAGAAGCCTTGGTACACATATATCAAAGGTGTTATCAGTGACGTTAGATGAATGGAATGATGATGAAATTGATGCCATGATAGAAGTTGGAGGAAATTCTTCTGCAAATGCTATTTATGAAGCCTTTATCCCTGAGGGATATTCAAAACCTGGACCAGATGCCACCCATGAACAACGTTCAAAATTTATCCGGTCCAAATATGAACTTCAAGAATTTCTGAAACCAAGCTTGAGAATTTTATCATCCAACTCTGCCAAAAGCAATATTCAAGCAAGCTTTTCTGCAAAGATCATGAATAGTTTTCGTTCAAATTCTTCACAAAAATCACAATCACAGGAAGGTATGGTAGAATATATTGGATTATTGAAGGTCAAAGTGATTAAAGGAACAAACTTAGCTATCAGGGATATGATGTCGAGCGATCCTTATGTAGTCATGACTCTTGGACAACAGACTGTCCAGACAAGTGTAGTCAGGAGCAACTTGAATCCTGTGTGGAATGAGGAACTGACGCTATCTGTACCTCAAGGTTTTGGAACCATAAAGTTGCAAGTATATGATTACGACACATTTTCAGCAGACGACATAATGGGAGAAGCAGAGATTGATCTCCAGCCCTTGATAACATCCGCGATGGCATTTGGAGATGCTGGAATGTTTTCAAACATGCAAATTGGAAAATGGCTGAAATCGCACGATAATGCTCTCATAACCGATAGCACCGTTAATATTGTTGATGGGAAGGTGAAGCAAGAGATAGCTCTCAAGCTTCAAAATGTGGAATCAGGAGAACTAGATCTAGAGCTAGAATGGATGGCTCTTGAACAATAGGTACATATAAATCCCTCCCAATTTTATTAAAATACGAGTGGTTAGTTATTTGGTATAGTCATTGGTATTGTGTATTTTTTTTTCCTTTCTTTTATTTGTTTTTCTTCTCTATATTGGGCCGAAATTTTTGCCTATCCATACTTTGTGGTCAGTTGTTGTAATGCTTTCTGTTCTCAAAATCTGATCACTACTTTCACTTGGTTTGTCCTTGTTCTAACCTAAGTATTCACTACAACCCCATGAAATATGATGGTTTGAAAACCATTGGAGTTGAAACTCAACTTAAACCTCTGCATTTCAA 1569 37.99 MNNRTMELGRPGSGKRRLRDLLLLKDNRFCADCRAADPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWNDDEIDAMIEVGGNSSANAIYEAFIPEGYSKPGPDATHEQRSKFIRSKYELQEFLKPSLRILSSNSAKSNIQASFSAKIMNSFRSNSSQKSQSQEGMVEYIGLLKVKVIKGTNLAIRDMMSSDPYVVMTLGQQTVQTSVVRSNLNPVWNEELTLSVPQGFGTIKLQVYDYDTFSADDIMGEAEIDLQPLITSAMAFGDAGMFSNMQIGKWLKSHDNALITDSTVNIVDGKVKQEIALKLQNVESGELDLELEWMALEQ 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3899552 3904590 + XM_039026008.1 Bhi03g00156 28933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00156 333 Pfam Putative GTPase activating protein for Arf 16 131 IPR001164 GO:0005096
Bhi03g00156 333 SMART C2_3c 178 273 IPR000008 -
Bhi03g00156 333 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 8 333 IPR044518 GO:0005096|GO:0005543
Bhi03g00156 333 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 8 333 - -
Bhi03g00156 333 PRINTS HIV Rev interacting protein signature 27 46 IPR001164 GO:0005096
Bhi03g00156 333 PRINTS HIV Rev interacting protein signature 46 63 IPR001164 GO:0005096
Bhi03g00156 333 PRINTS HIV Rev interacting protein signature 67 88 IPR001164 GO:0005096
Bhi03g00156 333 SMART arf_gap_3 15 137 IPR001164 GO:0005096
Bhi03g00156 333 ProSiteProfiles ARF GTPase-activating proteins domain profile. 15 143 IPR001164 GO:0005096
Bhi03g00156 333 SUPERFAMILY ArfGap/RecO-like zinc finger 15 132 IPR037278 -
Bhi03g00156 333 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 174 269 IPR035892 -
Bhi03g00156 333 CDD ArfGap 27 124 - -
Bhi03g00156 333 Pfam C2 domain 177 267 IPR000008 -
Bhi03g00156 333 CDD C2_ArfGAP 176 320 - -
Bhi03g00156 333 Gene3D C2 domain 173 332 IPR035892 -
Bhi03g00156 333 Gene3D Arf GTPase activating protein 3 135 IPR038508 -
Bhi03g00156 333 ProSiteProfiles C2 domain profile. 159 274 IPR000008 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00156 Bhi08g01031 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00156 Bhi-Chr3:3899552 Bhi08g01031 Bhi-Chr8:33662101 1.20E-179 dispersed
Bhi12g00912 Bhi-Chr12:27444625 Bhi03g00156 Bhi-Chr3:3899552 1.55E-37 dispersed
Bhi03g00156 Bhi-Chr3:3899552 Bhi08g01295 Bhi-Chr8:39537215 1.33E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00156 K12486 - csv:101218116 630.557