Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi03g00156 | CATTTCTCTCAAAGTTACAAACCGCCCCTTCTCCCACCCCCAACAAAAAAAAAAAAAAAAATAAATAATAAAACAGAAAATATTTTTTAAAAAAAAGAGGGTGGAAGAAGAGAGTTCTGCAAATTTCAATCATCCACATCAACAGGGTATTGAAGATTCAGATTTTCCGACCCAATCCCTTTTTTTCTCCATTTCTCATCGGCGATTTTGTTCAAGCATCGATCTCACCGGGATTTGTTGGATGATCGTCTATTACTGGCGGAGCAATGAATAATCGCACAATGGAACTTGGGAGGCCTGGCTCAGGCAAAAGAAGATTAAGGGACCTATTGCTTCTAAAGGATAATCGCTTTTGTGCAGATTGTCGCGCTGCAGATCCTAAATGGGCGTCAGCAAATATTGGAGTTTTTATATGCTTGAAATGTTGTGGTGTTCACAGAAGCCTTGGTACACATATATCAAAGGTGTTATCAGTGACGTTAGATGAATGGAATGATGATGAAATTGATGCCATGATAGAAGTTGGAGGAAATTCTTCTGCAAATGCTATTTATGAAGCCTTTATCCCTGAGGGATATTCAAAACCTGGACCAGATGCCACCCATGAACAACGTTCAAAATTTATCCGGTCCAAATATGAACTTCAAGAATTTCTGAAACCAAGCTTGAGAATTTTATCATCCAACTCTGCCAAAAGCAATATTCAAGCAAGCTTTTCTGCAAAGATCATGAATAGTTTTCGTTCAAATTCTTCACAAAAATCACAATCACAGGAAGGTATGGTAGAATATATTGGATTATTGAAGGTCAAAGTGATTAAAGGAACAAACTTAGCTATCAGGGATATGATGTCGAGCGATCCTTATGTAGTCATGACTCTTGGACAACAGACTGTCCAGACAAGTGTAGTCAGGAGCAACTTGAATCCTGTGTGGAATGAGGAACTGACGCTATCTGTACCTCAAGGTTTTGGAACCATAAAGTTGCAAGTATATGATTACGACACATTTTCAGCAGACGACATAATGGGAGAAGCAGAGATTGATCTCCAGCCCTTGATAACATCCGCGATGGCATTTGGAGATGCTGGAATGTTTTCAAACATGCAAATTGGAAAATGGCTGAAATCGCACGATAATGCTCTCATAACCGATAGCACCGTTAATATTGTTGATGGGAAGGTGAAGCAAGAGATAGCTCTCAAGCTTCAAAATGTGGAATCAGGAGAACTAGATCTAGAGCTAGAATGGATGGCTCTTGAACAATAGGTACATATAAATCCCTCCCAATTTTATTAAAATACGAGTGGTTAGTTATTTGGTATAGTCATTGGTATTGTGTATTTTTTTTTCCTTTCTTTTATTTGTTTTTCTTCTCTATATTGGGCCGAAATTTTTGCCTATCCATACTTTGTGGTCAGTTGTTGTAATGCTTTCTGTTCTCAAAATCTGATCACTACTTTCACTTGGTTTGTCCTTGTTCTAACCTAAGTATTCACTACAACCCCATGAAATATGATGGTTTGAAAACCATTGGAGTTGAAACTCAACTTAAACCTCTGCATTTCAA | 1569 | 37.99 | MNNRTMELGRPGSGKRRLRDLLLLKDNRFCADCRAADPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWNDDEIDAMIEVGGNSSANAIYEAFIPEGYSKPGPDATHEQRSKFIRSKYELQEFLKPSLRILSSNSAKSNIQASFSAKIMNSFRSNSSQKSQSQEGMVEYIGLLKVKVIKGTNLAIRDMMSSDPYVVMTLGQQTVQTSVVRSNLNPVWNEELTLSVPQGFGTIKLQVYDYDTFSADDIMGEAEIDLQPLITSAMAFGDAGMFSNMQIGKWLKSHDNALITDSTVNIVDGKVKQEIALKLQNVESGELDLELEWMALEQ | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3899552 | 3904590 | + | XM_039026008.1 | Bhi03g00156 | 28933 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi03g00156 | 333 | Pfam | Putative GTPase activating protein for Arf | 16 | 131 | IPR001164 | GO:0005096 | |
Bhi03g00156 | 333 | SMART | C2_3c | 178 | 273 | IPR000008 | - | |
Bhi03g00156 | 333 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 8 | 333 | IPR044518 | GO:0005096|GO:0005543 | |
Bhi03g00156 | 333 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 | 8 | 333 | - | - | |
Bhi03g00156 | 333 | PRINTS | HIV Rev interacting protein signature | 27 | 46 | IPR001164 | GO:0005096 | |
Bhi03g00156 | 333 | PRINTS | HIV Rev interacting protein signature | 46 | 63 | IPR001164 | GO:0005096 | |
Bhi03g00156 | 333 | PRINTS | HIV Rev interacting protein signature | 67 | 88 | IPR001164 | GO:0005096 | |
Bhi03g00156 | 333 | SMART | arf_gap_3 | 15 | 137 | IPR001164 | GO:0005096 | |
Bhi03g00156 | 333 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 15 | 143 | IPR001164 | GO:0005096 | |
Bhi03g00156 | 333 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 15 | 132 | IPR037278 | - | |
Bhi03g00156 | 333 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 174 | 269 | IPR035892 | - | |
Bhi03g00156 | 333 | CDD | ArfGap | 27 | 124 | - | - | |
Bhi03g00156 | 333 | Pfam | C2 domain | 177 | 267 | IPR000008 | - | |
Bhi03g00156 | 333 | CDD | C2_ArfGAP | 176 | 320 | - | - | |
Bhi03g00156 | 333 | Gene3D | C2 domain | 173 | 332 | IPR035892 | - | |
Bhi03g00156 | 333 | Gene3D | Arf GTPase activating protein | 3 | 135 | IPR038508 | - | |
Bhi03g00156 | 333 | ProSiteProfiles | C2 domain profile. | 159 | 274 | IPR000008 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bhi03g00156 | Bhi08g01031 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi03g00156 | Bhi-Chr3:3899552 | Bhi08g01031 | Bhi-Chr8:33662101 | 1.20E-179 | dispersed | |
Bhi12g00912 | Bhi-Chr12:27444625 | Bhi03g00156 | Bhi-Chr3:3899552 | 1.55E-37 | dispersed | |
Bhi03g00156 | Bhi-Chr3:3899552 | Bhi08g01295 | Bhi-Chr8:39537215 | 1.33E-43 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi03g00156 | K12486 | - | csv:101218116 | 630.557 |