Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi03g00168 | ATGAATTGTAAAAGCCAAAAGGAAGAAGATGACAGTAGAAACGACAACGAGGAGGATTTGGAAGATGAGGGAGGTTTGATGCAAATAAAACGACGAGAGGTTATTTATGGATCGCATCTAGTACAAGGCAAAATGAATCATGGAATGGAGGACTATATCGTTGCCGAAGAACGACATGTCGATGACCACAAGCTAGGACTATTTGCAATATTTGATGGCCACTCCGGTCGCGATGTCGCAGAGTACTTGCAGAGCCATCTGTTTGATAACATCTTGAGCCAGCCTGATTTCTGGGAAGACCCTGAAGGAGCAATCAGGAGAGCATATAAAGCAACAGATGAAGAGATTTTGGCTAAAAAAGTGAGAAAGAGAGGAGGTTCAACAGCAGTCACTGCTATACTAATTGATGGACATAAGCTAATTGTGGCTCACGTAGGCGACTCACGGGCGGTGATATGCAGGAATGGCTCAGCGAAGCCTATTACGGTTGATCACGAACCAGAGAAGGAGAAGGAGCTTGTCGAGAGCCGAGGCGGGTTTGTTGTACAAATGCCAGGAAGTGTGCCACGGGTGGATGGTCAGCTAGCAATGTCAAGGGCATTTGGTGATGCAAAGCTGAAAGAACACGTTACTTCAGAACCAGATATCAGGATCCTCACTATTGACAATGAGACTGAGTTCACCATTTTGGCCAGTGATGGCCTCTGGAAGGTGATGTCAAACCAGGAGGCTTGTGATTGCATCAGAGAAATGGCTATGGATGCTCAAAAGGCTTCAGAGGAATTGATCAAAAAGGCATTGTCTAAGATGAGCTACGATGACATTTCCTGCATTGTTGTTACCTTCCACTGAACATCTCCATCCCTCTTTGTATTTTCGGAGGAGTTTATGAAATGGCCATTGATGCTCAGAACAGTTGTGTTTTGACTGTATAAGATTTCTGGCCAATCACTTTCTT | 958 | 44.68 | MNCKSQKEEDDSRNDNEEDLEDEGGLMQIKRREVIYGSHLVQGKMNHGMEDYIVAEERHVDDHKLGLFAIFDGHSGRDVAEYLQSHLFDNILSQPDFWEDPEGAIRRAYKATDEEILAKKVRKRGGSTAVTAILIDGHKLIVAHVGDSRAVICRNGSAKPITVDHEPEKEKELVESRGGFVVQMPGSVPRVDGQLAMSRAFGDAKLKEHVTSEPDIRILTIDNETEFTILASDGLWKVMSNQEACDCIREMAMDAQKASEELIKKALSKMSYDDISCIVVTFH | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 4146428 | 4148613 | - | XM_039025680.1 | Bhi03g00168 | 28945 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi03g00168 | 283 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Bhi03g00168 | 283 | SMART | PP2C_SIG_2 | 40 | 282 | IPR001932 | - | |
| Bhi03g00168 | 283 | Pfam | Protein phosphatase 2C | 45 | 274 | IPR001932 | - | |
| Bhi03g00168 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
| Bhi03g00168 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
| Bhi03g00168 | 283 | PANTHER | ALPHABET, ISOFORM E-RELATED | 25 | 283 | - | - | |
| Bhi03g00168 | 283 | SUPERFAMILY | PP2C-like | 34 | 283 | IPR036457 | - | |
| Bhi03g00168 | 283 | CDD | PP2Cc | 34 | 282 | IPR001932 | - | |
| Bhi03g00168 | 283 | Gene3D | - | 29 | 283 | IPR036457 | - | |
| Bhi03g00168 | 283 | PANTHER | PROTEIN PHOSPHATASE 2C 28-RELATED | 25 | 283 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi03g00168 | Bhi-Chr3:4146428 | Bhi05g01953 | Bhi-Chr5:60540972 | 5.01E-114 | dispersed | |
| Bhi03g00168 | Bhi-Chr3:4146428 | Bhi08g00470 | Bhi-Chr8:16355090 | 1.58E-45 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi03g00168 | - | - | csv:101211141 | 482.256 |