Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00195 AAGAAGAGAGTATATATTAATTTGTGTTAAAATATAAAGTCAGCGACTTTCTCTTTCTCTTTCTATTTCTCTTTGTCTTTCTCTTGATCTCTCAGAAAAAGCTTCTCAAGTCCCAAACTTTGTTAGTTTATTTGATGACACTACTTATATAGAAGAATCCCAAAAGGAAAAAATGAAAGCGTTTGCTTTAGATGAGAGATTGAGAGGAAGGTAGTACTACTTATGTTGTTTTTGTTTGAATCAGATGGAGAATTATGAAGAAGGTGATTTGACTGATATTGTAAGAGGAGGAAGAAGATCAAGATCATCAACAACAAGCTGCTCTACTACTTCTAATTGCAAGACTGAAGAATTATTAGGTGGTGATCAAGAAGAAGAAGAAGATCATAATTATAATTATAATAATACTTCTCAGTGGCGGATGAGCAGTAGTAGTAGTACCTCCCAATTTTCATCACAATTACTACTACTACAAGAAGATGATCATCATCATCATCATCAATACAATTTTGGGGATCCATTTTGCAGTGCTCCAATAATTGATCATCTTCACGGTCAAGATCAGCTGAATAATACCGATAATGCTTTTTTCAATGCAATTTCTTCTTCTTCTACTACTACTACTACTGATCATCAAGATCATGAGCTACTTATGATCAAATCCCCTTCTAATTCCAATATTTTCTCACGTATGCTTCAGATCTCTCCTTCACTACCCAACAAATTCTCACCCATTTCTTCACTTAATACTTCCCCTTCTAATCATTTCCTTATTCCCAATCATTCCATTAATTCTCCTACCACTTCACATCCTCATCATTTTCTTCATCATAATGATAATAATCCCTCCGCCTCCGCCTCCGCCGCCCTTCACATCTCTTCTCCTCGGAATCCGCCCAGTATCAAGCGAAGGAAGAGCCAAGCAAGGAAGGTGGTTTGTGTTCCAGCTCCAGTGGCTGCCAGTAGCAGACCAAATGGGGAAGTTATTCCTTCTGATCTTTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCTCCATATCCTAGGGGGTACTATAGATGCAGCAGCTCAAAGGGATGTTCAGCAAGAAAACAAGTGGAAAGAAGTAGAACAGATCCAAACATGTTGGTGATTACTTACACATCTGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTTGCTGGCTCTTCAAGGTCCCAACAGTCCAAAAACAACAATAACACTAGTAATACTACTACTACAACACCCAATTCTTCAAAACTCTCTTCATCCAAAACTCAAGATCATCACAAAAATAAGGAAGAAGTTCAAGAAGTTCAAGAAGTTCAAGATCAAAACAACAACAACAACAATGGAACATTATTATCATCATCAGCTGCAGCAGCGTCAAATCACAATAATAATGTTAAGGAAGAGGAGATGATCGAGAATCATAATGAAGGGTTTGATGAAGATCATGATTTCTTTGCAGATTTGGAAGAATTACAAACGGACCCTTTAACTCTGTTGTTCAATACACAACAACACCATAAATTAGACCAAATCAAAGGATCAGACACTACCACTACTACTGGCTGCTTACACGACGTCGTTCCATTCAATAATCTCTTCGATTGGCCACCACCTCTAAACAACAATTCAACGGAACAACAACAACCACCACCTACTACTGCTACCAACAGAGGTTTTTATTAAACCAAATTCCCCTACCCTATAATATATACATATATATTGGGTGCATTTTTACAATACCAACAATGTTACATTTGTGATTTAATTAATGATGATGAGGTATATACGTAGATTACATTACGGTATATCA 1835 37.11 MENYEEGDLTDIVRGGRRSRSSTTSCSTTSNCKTEELLGGDQEEEEDHNYNYNNTSQWRMSSSSSTSQFSSQLLLLQEDDHHHHHQYNFGDPFCSAPIIDHLHGQDQLNNTDNAFFNAISSSSTTTTTDHQDHELLMIKSPSNSNIFSRMLQISPSLPNKFSPISSLNTSPSNHFLIPNHSINSPTTSHPHHFLHHNDNNPSASASAALHISSPRNPPSIKRRKSQARKVVCVPAPVAASSRPNGEVIPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQQSKNNNNTSNTTTTTPNSSKLSSSKTQDHHKNKEEVQEVQEVQDQNNNNNNGTLLSSSAAAASNHNNNVKEEEMIENHNEGFDEDHDFFADLEELQTDPLTLLFNTQQHHKLDQIKGSDTTTTTGCLHDVVPFNNLFDWPPPLNNNSTEQQQPPPTTATNRGFY 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4389864 4393222 - XM_039025426.1 Bhi03g00195 28972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00195 487 MobiDBLite consensus disorder prediction 197 213 - -
Bhi03g00195 487 MobiDBLite consensus disorder prediction 293 346 - -
Bhi03g00195 487 MobiDBLite consensus disorder prediction 463 487 - -
Bhi03g00195 487 MobiDBLite consensus disorder prediction 1 48 - -
Bhi03g00195 487 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 6 443 - -
Bhi03g00195 487 ProSiteProfiles WRKY domain profile. 244 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g00195 487 MobiDBLite consensus disorder prediction 364 379 - -
Bhi03g00195 487 MobiDBLite consensus disorder prediction 188 227 - -
Bhi03g00195 487 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 443 IPR044810 GO:0003700
Bhi03g00195 487 MobiDBLite consensus disorder prediction 347 363 - -
Bhi03g00195 487 Pfam WRKY DNA -binding domain 251 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g00195 487 Gene3D WRKY domain 223 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi03g00195 487 MobiDBLite consensus disorder prediction 266 379 - -
Bhi03g00195 487 SUPERFAMILY WRKY DNA-binding domain 248 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi03g00195 487 SMART WRKY_cls 249 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi03g00195 487 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00195 Bhi-Chr3:4389864 Bhi05g01939 Bhi-Chr5:60228860 4.56E-35 dispersed
Bhi01g02309 Bhi-Chr1:56506187 Bhi03g00195 Bhi-Chr3:4389864 1.47E-36 transposed
Bhi11g01261 Bhi-Chr11:37277686 Bhi03g00195 Bhi-Chr3:4389864 8.53E-33 transposed
Bhi12g00774 Bhi-Chr12:23250334 Bhi03g00195 Bhi-Chr3:4389864 1.58E-36 transposed
Bhi03g00195 Bhi-Chr3:4389864 Bhi08g00957 Bhi-Chr8:31343562 6.51E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
525 PF03106 WRKY 2.80E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00195 - - cmo:103484291 478.789