Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00216 GAAGGCAAAAAATCGAGAATTGGAGCGAGCGAGTAAAATCAGATATCGGCGTCAGACAAAAGAAAACCCCCTTTACGGATAGAAGAAGGCCACGATCAAAACCCTAAATCTTCGTGATCTCTGTTCGTTTGATTCCCTCCCGTTCTCGTTTTTTCCCACAAAATCCTGTGCTTTAGGAACATCTCGTCTCGTTTCGGAATTTGAATTTAGAGCGCTACGGTGTGTGTTCTGGTTATGGGGAAGAAGAAGAAGAGAGTTGCGTCTAAGGTATGGTGTTATTATTGCGACAGAGAATTCGATGACGAAAAGATATTGGTGCAGCATCAGAAGGCCAAACACTTCAAGTGCCATGTCTGTCACAAGAAGCTTTCTACTGCCGGCGGTATGGTCATCCACGTTCTTCAAGTCCACAAAGAGTCAGTCACCAAAGTTCCTAATGCAAAACCAGGTAGAGAAGCAACAGATATTGAAATATATGGAATGCAAGGAATTCCTCCTGATGTCTTGGCAGCACACTATGGAGAGGACGAGGAAGAGTCCTTGTCGAAGGTGCCCAAAGTGGAGATGCCATCAACTCAGATGGTTGGAGGTGTGGTGCCCGGATCACTGGGTATTGTATACCCTCCTCAGCCAGGTTTAGCTGCAATACAACCTATTTATCCTTCGACTGGACAAGCACAGCCTACTGCCTGGCCAATTCCACCTCGTCCCCAACCTTGGTTCCCCCCAAATTCAGCCGTTTCAATTCCTCCTCCTGCCCCATTGGGCTATGCTCAGCAGCCACTATTTCCCGTGCAGACTGCAAGGCCCCCACTTCCAGTATCATCAACTCCTATGCTCCAGCCTTTACAAATTACGCCTCCTGGGTTGACTTCAACCACACCTTCAGTTTCTGTATCTCAACCGTTGTTCCCTGTTGTTAGTAATAGCCACGGACCTACCCAAAGTTCTCCTTTTTCTTCATCTACACTTTCAACAAGCATTCCTTTGACCTCGGCAGCAGATATCAAAGGCTCAGTGACACATCTGGGCACCAACTCCTTTTCTACAGTTGGTAATCAAGTTTCAAACATTCCAGGTGGAATATTAAGCAATTCACACTCCTATGCCTCGGGACCAAATACAGGTGGTCCTTCTATCGGACCACCACCTGTAATTGCAAATAAAGCTCCTACTCAACCATCAACAAATGAAGTATATTTGATTTGGGATGACGAGGCCATGTCTATGGAGGAAAGAAGAATGTCCTTAACTAAGTATCAGGTGCATGATGAAACTAGCCAGATGAGTTCAATAGATGCAGCCATTGACAAACGAATCTGGGAAAGCAGGCTTGCTGGCCGAATGCCATTTTAGTTCAAGCCATGATGACAGTGTTGTGAAGCTCCTCCATAGGCGGACCGTGGTGTTGTAGGTCTCAGAAGAAACTGTGGCATTTGTAAGGCCCCATGCAATGTTGGGGACATATTTTAGGGCTGCCTTCACAGATTGAGCAAATTAAACGTCTACATTGAATTCATTGCCAGAAATTGCATTGGACAGGACAGAGTTTTCTTTTTCATATTTATGTTGTCAGATATCTCTAGGCGATTTAAATGAGAGGGTGTTTTCTTTTCTGTCTTTTTCATTTATTTTTTTTCCCCTATTTGTATCAATTTTATAAACCCTTTTTCACTAGAGCTAGAACCCTATTAGAGTTGACCTTAGAGTAACATATACAGTTTCGACCTTGGGAGATAATTTAATCTCCCTTACAATA 1759 44.17 MGKKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVTKVPNAKPGREATDIEIYGMQGIPPDVLAAHYGEDEEESLSKVPKVEMPSTQMVGGVVPGSLGIVYPPQPGLAAIQPIYPSTGQAQPTAWPIPPRPQPWFPPNSAVSIPPPAPLGYAQQPLFPVQTARPPLPVSSTPMLQPLQITPPGLTSTTPSVSVSQPLFPVVSNSHGPTQSSPFSSSTLSTSIPLTSAADIKGSVTHLGTNSFSTVGNQVSNIPGGILSNSHSYASGPNTGGPSIGPPPVIANKAPTQPSTNEVYLIWDDEAMSMEERRMSLTKYQVHDETSQMSSIDAAIDKRIWESRLAGRMPF 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4897771 4903354 + XM_039025997.1 Bhi03g00216 28993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00216 373 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 373 - -
Bhi03g00216 373 Gene3D Classic Zinc Finger 2 66 - -
Bhi03g00216 373 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Bhi03g00216 373 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Bhi03g00216 373 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Bhi03g00216 373 PANTHER ZINC FINGER PROTEIN 207 1 373 - -
Bhi03g00216 373 SMART c2h2final6 36 59 IPR013087 -
Bhi03g00216 373 SMART c2h2final6 12 35 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00216 Bhi-Chr3:4897771 Bhi03g00226 Bhi-Chr3:5017639 1.08E-65 dispersed
Bhi03g00216 Bhi-Chr3:4897771 Bhi03g00217 Bhi-Chr3:4897771 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
528 None None None None Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00216 - - csv:101206973 685.641