Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00225 GAAACCCCCTTTCCGGATAGAAGAAGGCCACGAACAAAACCCTCGATCTTCGTGATCTCTGTTCGTTTGATTCCCTCCAGTTCTCGTTTTTTCCCCAAAATCCTGTGCTTTACGAAGATCTCGTCTCGTTTCAGAATTTGAATTTAGAGCGGTACGGTGTGTGCTCTGGTTATGGGGAAGAAGAAGAGAGTTGTGTCTAAGATATGGTGTTACTATTGCGACCGAGAATTCGATGACGAAAAGATATTGGTGCAGCATCAGAAGGCCGAACACTTCAAGTGCCATGTCTGTCACGAGAAGCTTTCTACTGCCGGCGGTATGGTCATCCACGTTCTTCACGTCCACAAAGAGTCAGTCACCAAAGTTCCTAATGCAAAACCAGGTAGAGAAGCAACAGATATTGAAATATATGGAATGCAAGGAATTCCTCCTGATGTCTTGGCAGCACACTATGGAGAGGACGGTTCAACACAATTAAATCCGCATTCTCTTACACTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATTGCTATTTATATTATAATGGCAATGAAAGAACCTTCTAGTAAACATGAACCGGATCCTGCATTTCTTGTCGAAGCAAAAGCTAGTATAAACCAATCTAATGGGAAATTAAATGAACCCTCACAAGCTCACAATAAGAAGGAAGAATAGGCCATGAGAGAGGGAGGCTTTGATTAGGAACAATCTCAAGGCTAATCTCCCAGTATTTTTTATGATAATTAGTCTCATGTGTGGTCAGATTGTCTGCTTGTCAATTGAGACTTGGGAAGAAAGAAAGTTCTGTTTCTTCACTTGTTTTGTTTTGTGAATATGGACTGCATTTAGATTTGATACTTTTGTTCCACTGGTGATGTTCTTCACTATTTGCTATGAACTCTTTGCTTCTACTGTCATAACGTGTAGAGATGTAATAGCCTTTGGGGAGAATTAAAAGAAAATTTAGATTATTGTA 988 40.49 MGKKKRVVSKIWCYYCDREFDDEKILVQHQKAEHFKCHVCHEKLSTAGGMVIHVLHVHKESVTKVPNAKPGREATDIEIYGMQGIPPDVLAAHYGEDGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLVEAKASINQSNGKLNEPSQAHNKKEE 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5017639 5028610 - XM_039026850.1 Bhi03g00225 29002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00225 171 SMART c2h2final6 11 34 IPR013087 -
Bhi03g00225 171 SMART c2h2final6 35 58 IPR013087 -
Bhi03g00225 171 Pfam VMA21-like domain 95 131 IPR019013 GO:0070072
Bhi03g00225 171 ProSiteProfiles Zinc finger BED-type profile. 6 65 IPR003656 GO:0003677
Bhi03g00225 171 PANTHER ZINC FINGER PROTEIN 207 1 101 - -
Bhi03g00225 171 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 101 - -
Bhi03g00225 171 ProSitePatterns Zinc finger C2H2 type domain signature. 37 58 IPR013087 -
Bhi03g00225 171 ProSitePatterns Zinc finger C2H2 type domain signature. 13 34 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00225 Bhi-Chr3:5017639 Bhi03g00226 Bhi-Chr3:5017639 2.73E-119 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
529 PF09446 VMA21 9.50E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00225 - - bhj:120073929 332.413