Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00271 TTGCGTATATTTAAACCCACCCTCTCTCTCCTTTATTTCTCTCTTTCATCTCTCTCGCCAAAATCAGAAAAATTAGAAAAGAAAAGAAAAGCAGAAAACTTTATCGTTTCACAATCACGGCCTCCTCTCAAACCCCAAATCCAGCAAAATTCATCCCGAAAAAGCTGCCATCTATTTTAATGGTAGAGCATTACCCTCCAAATTAATCTCCCAAGCAACCCCACAATCCTTTCTCCGCCGCCTCCTCTGCATTTTCCCCCTTTCCCCTAATTTTCTGTTCATCAATGGCCGACCGGCCCGACCCTGACAAGAAGACCGAAACCACCAGGAAGGACATGCCCGCCCTTCTTTTGGGCCGATACGAGATCGGGAAGCTCCTTGGCCATGGCACCTTCGCTAAGGTCTATCATGCCCGAAACATCAAGACCAACGAAAGTGTCGCCATTAAAGTCATCGACAAGGAGAAGATCCTCAAGGGTGGTTTAATCGCCCACATCAAACGCGAGATCTCAATCCTCCGCCGTGTTCGACATCCCAATATTGTGCAACTCTTCGAGGTTATGGCCACAAAGGCCAAGATCTACTTCGTTATGGAATATGTCCGTGGCGGCGAGCTTTTCAAGAAGGTTTCCAAGGGCCGATTGAAGGAAGAGGTAGCACGAAAGTACTTTCAGCAATTAATCTCAGCCGTTGCTTTTTGCCACGCTCGTGGTGTTTATCATCGCGACCTTAAACCGGAGAATTTGCTGCTTGATGAGAATGGGAATCTTAAGGTCTCCGATTTTGGCCTCAGCGCTGTCTCCGATCAAATTCGACAAGATGGGTTGTTTCATACTTTTTGTGGTACACCAGCTTATGTGGCTCCGGAGGTTTTGGCCCGCAAAGGGTATGAGGCTGCGAAGGTCGATATTTGGTCATGTGGGGTTATTCTGTTTGTTCTGATGGCCGGTTATTTGCCCTTCCACGACCAAAACATTATGGCAATGTATAAGAAGATTTACAAGGGGGAGTTTCGGTGTCCGAGATGGTTCTCGCCGGAGCTAATTCGACTCCTAACTCGTCTTTTAGATACAAATCCCGAAACCCGTTTCACAATTCCTGAAATCATGGAGAATAGATGGTTCAAAAAGGGGTATAAGCATATCAAATTCTATATCGAAGACGATAAGGTCTGTAGCGTTGAGGATGATAACAATGATGTCGATTCCTTGTCGGATCAATCACAATCGGAATCGGATTCCGAAATTTTTGAGACCAGAAGAAAGGTTACCTCACTTCCAAGACCCGCGAGTTTGAATGCATTTGATATTATTTCGTTTTCGCCCGGATTTGATCTTTCTGGATTGTTTGAAGATGGAGGGGAAGAGGCAAGATTTGTGTCCAGTGCTCCGGTGTCGAAGATTATATCGAAACTGGAGGAGATAGCCAAATTGGTGAGTTTTACAGTGAGGAAGAAGGATTGCAGGGTTAGTTTAGAAGGGTCGCGGGAAGGAGTGAGAGGGCCATTGACAATCGCAGCCGAGGTATTCGAGTTGACACCGAAATTGGTGATGGTAGAGGTGAAGAGGAAAGGGGGAGATAAAGCAGAGTATGAACAGTTCTGTAATAATGAATTGAAGCCAGCATTGTTGAATTTGAAGGTGGAAGATTCTGCAGCTCCATCACATATACCATCAGATACCGAATGAAAGCCATTTTCAGATAACAGATAAAAGGGAAAAAGAAAAGGTATGCTTTTCTTTCCTTCTCTGTAACTTCTTCTCCTCTGCTCTAACCAAAGCCCCAACCCCATGTATGATAACTTCCTTCATTTTGTTTCTTTCTCTTGAGTTTCTCTTTTTGTTTTTTGTTTTTTGTTTTTCTTCCATTGCGTTTCTCTGTAATTTGATTGCCTCTCTAGAATGGGGTTTGGATTCAATGCGAGGAGAACAAAAAAGAAACAAAGAGGGAAAAAAATGGTGATTTTTAGATGTTAATATGTAATCTTCAAACTTGTGTGATGTAATCTTGTTTTGACTTCGAGATGGCTAGCGTAGAGTGGAGACAGAGAGAGAGAGTAAACTGAGAGTTGTGTATTTGGCACTGGCAGGTATTCGTAATCTGTATGTATGAAGCATATGAAGAAATAACCAAAAAAAAAAGAAAAAGAAAACTTATATGATTATTGATCTTA 2173 42.98 MADRPDPDKKTETTRKDMPALLLGRYEIGKLLGHGTFAKVYHARNIKTNESVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFKKVSKGRLKEEVARKYFQQLISAVAFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNIMAMYKKIYKGEFRCPRWFSPELIRLLTRLLDTNPETRFTIPEIMENRWFKKGYKHIKFYIEDDKVCSVEDDNNDVDSLSDQSQSESDSEIFETRRKVTSLPRPASLNAFDIISFSPGFDLSGLFEDGGEEARFVSSAPVSKIISKLEEIAKLVSFTVRKKDCRVSLEGSREGVRGPLTIAAEVFELTPKLVMVEVKRKGGDKAEYEQFCNNELKPALLNLKVEDSAAPSHIPSDTE 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5787930 5790102 + XM_039026585.1 Bhi03g00271 29048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00271 467 CDD STKc_SnRK3 25 279 - -
Bhi03g00271 467 Gene3D Kinase associated domain 1, KA1 335 452 - -
Bhi03g00271 467 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00271 467 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Bhi03g00271 467 Gene3D Transferase(Phosphotransferase) domain 1 17 334 - -
Bhi03g00271 467 MobiDBLite consensus disorder prediction 303 323 - -
Bhi03g00271 467 PANTHER - 19 461 - -
Bhi03g00271 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Bhi03g00271 467 CDD CIPK_C 338 448 - -
Bhi03g00271 467 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 461 - -
Bhi03g00271 467 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00271 467 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Bhi03g00271 467 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00271 467 ProSiteProfiles NAF domain profile. 332 356 IPR018451 GO:0007165
Bhi03g00271 467 Pfam NAF domain 334 390 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00271 Bhi-Chr3:5787930 Bhi06g01809 Bhi-Chr6:50648534 0 dispersed
Bhi03g00271 Bhi-Chr3:5787930 Bhi08g02183 Bhi-Chr8:62148419 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87522 PF00069 Pkinase 4.60E-76 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00271 - - csv:101214053 884.404