Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00323 AAAGGATGACGGCCGACAAGATTTTCGTAATGTACAGATGTCGCAAAGGAGTGCCGGTGAAATACCAATTTTGTAACGTTCTGTTTCCTTCAATAATTCTATGGTTCGTTCAATAATCGACAAATTACACCTGAAATTTTCACTCAATTCATCTCTCTCTTCAATCGTCTCCTCCGCCATTTCTCGATCAAAGAGTTCGTTCCCATGTCGCTGTAGAGAAACCCACCAACCCTTTAATGGGGACCGTACGATCTTCCTTCTCATGAGCTGTTGCGTTGGTTGAGCCTCTGATTGAGGGCGGGAAAGAGTATTTTAAGGGTTTTCTGTTGTAGGGTTTTTTTAAAAAACTATTTTCATTGGGAATTTTTGGGAGAAAAAAGGCTGGTGATGGGCCATGGCCAATCCATATTGCAACAACCACTTTTATACCCTCAGGACTTGCCTTCATCTTTACTACTACGACTTCACAAAGCTGGACCAGTTGTCTACTGCCTTCTCTTTCAAAAATCGGGAGTGGCTATGCATTAGAAGTTTTGAAAGGTCTCTCCATTGATTTCTTCTCCAGCTTTTTCTGTGGAGAAATTGAATGATTTGCAAAAAGATTCCCCAAGGTTTAAAAATGGTGGTACTAATGGGAACGGTAAGTCTCTTGGGATGCCAATTGAAGATGTAGCTGCAGTTCGGATTCAGACAGCATACCGAGCATATTGTGCCAGGAAAAATTTACGTCGCTTGAAAGGGGCCTTCAGACTGCAGAATCTGACTCAAGGCAATTCCGTTAGAAAGCATGCTACATCTACATTAGGCTATCTTCATTCCTGGAGCAATATACAGGCTCAAATTAAGGCTCGTCGACTTTGTATGGTGACAGAGGGACGACAGAGACAAAAAAGATTAGAAAATCAACGAAAACTTGAGGCTAAGCTTCATGATATAGAGGTGGCGTGGTGTGGGGGTGCAGACTCCATGGACGGGATTCTTTCTAGGATACATGAGAGAGAAGAAGCAGCTGTTAAACGCGAGCGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAATGAGATGTATGGGTTGGGTAAGGACGAACTTGGTAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATAGCTGCTCGTCCGTGGGAAAGCCGTGTACCATCTCAGTTCGTTAGTCCAAAGAAATCTACAATTAGGCAATCGAGCAAAGTCAGTCAGAGAAATTCACCATCCCCTAAAGCACGAGTTTCGATCAAACCACCTTCCCCAAATGGGAAATCAACTTCAAAGGCTCGGAGGTTGTCTTATCCAGCAACCGAGAAACTGACTATGGAAGAAAAAGGCGTCAAAGAAAGCATTAAAAATGACAAAGGGAACACTACGAAAGAAGAAACAACGTCCTAATCGATGCCATTTATAGAATGCAAAACGTGTTCATATTTTTATCAAAGAAAGCCAGAGAAAAAAAATAAAAGATGTAGAAGCCATTTATTTTCTGTATGTCATTTCTGATGATGTTCATTCATTGAGTGGTGTGAGGTAATGTATTATTGGCATGCAGTCTGACCCCATGTCATTATTTCTTACATTTCATTTCCTTTTCCTTGTTATGTATATTTGAAAGAAAAAGAAAGACAGTATTACTTAAGTTATAATGTATATGATACGAACAGTGTTAATGATTT 1697 41.01 MPIEDVAAVRIQTAYRAYCARKNLRRLKGAFRLQNLTQGNSVRKHATSTLGYLHSWSNIQAQIKARRLCMVTEGRQRQKRLENQRKLEAKLHDIEVAWCGGADSMDGILSRIHEREEAAVKRERAMAYAFSHQWRANSNEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSQFVSPKKSTIRQSSKVSQRNSPSPKARVSIKPPSPNGKSTSKARRLSYPATEKLTMEEKGVKESIKNDKGNTTKEETTS 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6963887 6969157 - XM_039025623.1 Bhi03g00323 29100

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00323 253 Gene3D - 5 50 - -
Bhi03g00323 253 PANTHER IQ-DOMAIN 9 1 228 - -
Bhi03g00323 253 MobiDBLite consensus disorder prediction 175 220 - -
Bhi03g00323 253 MobiDBLite consensus disorder prediction 225 253 - -
Bhi03g00323 253 ProSiteProfiles IQ motif profile. 4 32 IPR000048 GO:0005515
Bhi03g00323 253 MobiDBLite consensus disorder prediction 173 253 - -
Bhi03g00323 253 PANTHER IQ-DOMAIN 5-RELATED 1 228 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00323 - - - csv:101220729 461.84
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00323 Bhi-Chr3:6963887 Bhi03g00326 Bhi-Chr3:6963887 0 dispersed
Bhi03g00323 Bhi-Chr3:6963887 Bhi03g00324 Bhi-Chr3:6963887 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi06g00669 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi06g00668 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi02g01384 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01383 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01385 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi09g03139 . 1 438 IQD Protein Family AT2G26180 61.6 9.3e-120 427.9
Bhi03g00330 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00327 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00326 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00329 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00328 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00324 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00323 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00325 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi01g03276 . 83 266 IQD Protein Family AT2G33990 53.5 1.6e-48 190.7
Bhi01g03276 . 86 259 IQD Protein Family AT3G15050 62.7 8.5e-55 211.5
Bhi03g00330 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00327 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00326 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00329 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00328 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00324 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00323 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00325 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi12g01121 . 124 476 IQD Protein Family AT5G13460 52.1 9.4e-78 288.5
Bhi12g02233 . 1 508 IQD Protein Family AT4G00820 51.3 2.8e-113 406.8
Bhi12g02232 . 1 509 IQD Protein Family AT4G00820 51.2 3.7e-113 406.4
Bhi01g00618 . 1 466 IQD Protein Family AT4G00820 50.5 1.1e-104 378.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007113 1 8 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 0 1 0 2 1 2 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi03g00323 Bhi_Chr03 FPKM 6.700424 7.721507 17.890274 15.525184 2.421929 1.797244 2.496035 52.990784 55.059425 52.628139