Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00342 GGTATTGAGAGTGAGAGTCAAATATCATCATATCATAGGCAAACAAAAAGGCATTTCATGGCTTCATCAAACAGACATTGGCCTAGCATGTTCAAGTCCAAACCTTGCAATTCTCACCACCAATGGCAACATGATATCAATACTAATCTTTCTTCTTCCACTGCCACTACCTGCCTCAGATCTGCCCCTTACACTACAGTTGGTGGGTGTGAAGAGAGAAGTCCAGAGCCAAAACCAAGATGGAATCCAAAACCTGAACAAATTAGGATTCTTGAAGCAATTTTCAATTCTGGGATGGTGAATCCACCTAGAGATGAAATTAGAAAAATTAGAGCTCAATTGCAAGAATATGGACAAGTTGGTGATGCCAATGTTTTTTATTGGTTCCAAAACAGAAAATCCAGAAGCAAAAACAAACTCCGCCATATCCAAAACTCTAAATCCAATCATAATTCCCAAACCGCCACAGCCACAACCACCGCCATCGTCTCCATCGCCGCGACCACCACCACCACTTGTTCTTCCTCTTCTTCCTCTGACAAATCTTCTCCCAAAAAACCTCCCATTAGGACTCCCACCTCCAACAATTCGGTGACTCAGAACTACCTTCAACAACCCACCAACGACGTCTTGCCTGAACCCTTTTTCTTCCCGGTGTCGCAGACCGGGAGTGGCGGTGGCAGCGGAAGCTGTAATTTGAGTCAAGGGTTTTGCTTCTCAGAGCTGTGCAGTGTAGTTCAGCAAGTTCCTGAACATGGAGTTGGGCCTTGCACAAGCCTGTTGTTGAGTGAAATTATGAGCCCACAAACTGAGGACTTAAAGAAAGATTTGGATCAAGACAAGATTAATATGGTGAAGTTAGAGCCCCAGTTTATGAATTTTCATCCTTGTTTGACTTCCTCTACTACTGATCACACTCTTCCTCAAACCACTATTTCCACCCCTCTCACCACTCTTCCATCTCCTACCAATGCAATTCCTCAAGGTGTAGGTGAAGTTTGTGGAGTAGGTCAAAGCTGTGTAGGGAAATCAACGGTGTTCATCAATGGTGTGGCGTTCGAGGTGGCTTCTGGACCGTTCAATGTACGAGAGGCTTTTGGTAATGAAGCCGTTTTGATTCACTCAAATGGTCAGCCTGTTCTCACCAATGACTGGGGTCTCACTCTCCATTCACTCCAACATGGTTCTTACTATTATCTGGTTAGCCCCTTTTCATTTCCTTCTAATCCATCTTAATTCAAAGTAAAAAAAAGGTTCAATTTTTTATTAAAAATGCGGAGGATTACATATTTTTTAACAAAGAACTAGAGGTTGAGAGATCAATAGATGGACACATCCACATCGCCTCTCATCACGTCATAGTTTTAAAAGCGTTAAAATATTAGTGACATCAAAACATGTCAGTT 1406 42.6 MASSNRHWPSMFKSKPCNSHHQWQHDINTNLSSSTATTCLRSAPYTTVGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKNKLRHIQNSKSNHNSQTATATTTAIVSIAATTTTTCSSSSSSDKSSPKKPPIRTPTSNNSVTQNYLQQPTNDVLPEPFFFPVSQTGSGGGSGSCNLSQGFCFSELCSVVQQVPEHGVGPCTSLLLSEIMSPQTEDLKKDLDQDKINMVKLEPQFMNFHPCLTSSTTDHTLPQTTISTPLTTLPSPTNAIPQGVGEVCGVGQSCVGKSTVFINGVAFEVASGPFNVREAFGNEAVLIHSNGQPVLTNDWGLTLHSLQHGSYYYLVSPFSFPSNPS 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7159426 7161323 + XM_039027480.1 Bhi03g00342 29119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00342 392 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 384 - -
Bhi03g00342 392 SMART HOX_1 57 124 IPR001356 GO:0003677
Bhi03g00342 392 SUPERFAMILY Homeodomain-like 55 122 IPR009057 -
Bhi03g00342 392 ProSiteProfiles 'Homeobox' domain profile. 55 120 IPR001356 GO:0003677
Bhi03g00342 392 MobiDBLite consensus disorder prediction 153 181 - -
Bhi03g00342 392 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 384 IPR044557 GO:0003700|GO:0050793
Bhi03g00342 392 CDD homeodomain 58 120 IPR001356 GO:0003677
Bhi03g00342 392 Pfam Homeodomain 59 119 IPR001356 GO:0003677
Bhi03g00342 392 Gene3D - 59 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00342 Bhi-Chr3:7159426 Bhi11g02705 Bhi-Chr11:72529669 2.04E-16 dispersed
Bhi03g00341 Bhi-Chr3:7159426 Bhi03g00342 Bhi-Chr3:7159426 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
549 PF00046 Homeodomain 1.40E-14 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00342 - - bhj:120074379 733.021