Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00353 AATACGGGCGAGCCGTACACAAATCGCTGTTTATTCAGTTTCTGATATTATAATGGTGGAATTTAACTAACCAATGCTTACTCCTACTTTCTTTTTCTTTTTTCTTTTTTTTCTTTTCTTTTTCTTTTCTCTCTCTCTCTCTCTCTCTTCTTCTTCGTCTTTCTGCCATACATCACTCCTTGCAGTCGCAGTATTGCAGCGGCTGCAGTACTGCTCCAGTTCAGTCTCTCTGCACAGCCACACAGAGAAACAAAGAAAGAAAAAGGGAGGTGAAAATTATATCAATTCCTTTCCCCCCATTTCTCTTTTCTATCTCTTTTCTTACTTTTCTTTCAAATTAACCCATCAAATCTTGATTTGATTTTGATTTTCCCCAAAACCCATTTCCAAAAAGAAAAGAAATATACGAAATTTGGGTGTAAGAGAGAAAAAGGGGTCGAGAGAAACAGAGGTGTTTGTGTTTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGTCTGGTCTGTGTTGTTTTCTGAGTGAAAGACCCTCTTTTAGCATTAGCGAAGGTGCACCCATTTCTAAAAATGCAGGCATGAGCTCCTCCTCTTCTTACCTCGCACTCTTTCTTCTTCCGTTCCTGAAACTCTCAGAAACCCTTCGTCTTTTCAGGCTTCTATTTAACCACTTCTTTCTTATTCTTCTACTTCTATTGCTGCACGCCTCCTCTTCTTTCTTCTAGGGCTACCATTCAAATGGGTGCTCTCATCGATCTTAATACCACTGAAGAAGATGAATCTCCCTCTTCTGCTGGTTCTTCTGTTTCTTCTTCCTCCGCTTCTGCTTTAACCTCCTCTCCTTCTCCTTCTGTTACTTCCTCAATTTGCTTGGAGTTATGGCATGCCTGTGCTGGTCCTCTCACGTCTTTGCCCAAGAAAGGGAGTTTGGTTGTGTACTTGCCGCAGGGTCACTTCGAACAGATGCAAGAATTTCCGGCTACGCCTTGTGATCTTCCTCCCCACATCCTCTGTCGCGTCATTGATGTTCAGCTTCATCAGGCTGAACCTGGGAGTGACGAGGTTTATGCTCAGGTTTCGTTGTTTCCTGAAAACGAGCAAATGGAGCATAAGATGCAGGAAGAGATGAACAATGACAGTGAGGAGGAGGATGTTGAAGAAGGTGAGAAGACTACAACACCCCACATGTTCTGTAAGACCCTTACCGCTTCTGATACTAGTACTCATGGAGGCTTCTCCGTCCCTAGACGTGCAGCTGAGGATTGCTTCCCGCCATTGGATTATAACCAACAGAGGCCTTCACAAGAGCTTGTAGCAAAGGATCTCCTTGGGCTAAAATGGAAGTTCAGGCACATATATCGTGGGCAGCCTAGAAGGCATTTGCTAACCACTGGATGGAGTGCTTTTGTGAATAAGAAAAGGCTTGTTTCTGGAGATGCAGTGCTTTTTCTTAGGGGCAATGATGGTGAACTAAGACTGGGAATTCGAAGAGCTGCACAGCTTAAAAGTGGTTCGGCCTTTTCTAATATTTGCAGTCAGCAGCTCAATGCTAGTAGTATCATGGATGTGGTTAATGCAATATCTACGAAAAGTTCCTTTAGCGTATACTACAATCCCAGGGCTACCTCTTCACAGTTTGTCTTGCCTTTTCACAAGTTCTTGAAGAGCATTAACCATTCTTTCTCTGTTGGAATGAGGTTTAGGCTGAGTTTTGAAACCGAAGATGCTGCAGATAGAAGACACACTGGACATATAACTGGAGTTGGCGATGTGGATCCTATTAGATGGCCAGGATCAAGGTGGAGGTCCCTTTTGGTGAGGTGGGATGACGGTGAAACTAACAGGCATGGCAGGGTTTCCCCTTGGGAGATCGAGCCCTCTGGTTCTGTTTCTTTGTCAAGCAACTTGGTTCCACCTGGTCTGAAGAGAACCAGGATTGGGCTCTCTTCCACAAAACTAGAGTTTCCAGTTCCAAATGGGATTGGAGCATCAGACTTTGGGGAATCTTTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTAGGTTACAGTACTCCTACTGACGGTGACGAGAACAATCGTAATCCACCCGAAAAGAGGAGATTGTTTCCTGGTTTACATGGTTCTGGGATAGCTCTGATGAGAAATAGTCCAAGAAACCCACTTATCAACTCAGAAACTTCCTCCCGGGGTATCATGTTTGATGAATCCTTCCAATACCATAAGGTCTTGCAAGGTCAAGAAATATTTCCAAGTCCCTTTTATGGTAGGGCCGTGGCCACCAATGAAGTCAAGGTAAGTGGTGGTCGTGGTCCTGTCGATGGCATTCGAATGTCTAGGACTAAAGACGGATGGCCCATAACAATGCAATGTGAAAATTTCCTCACACGGTCTTCCATTCCTTCTGTACAAGTCTCATCACCATCTTCTGTATTCATGTTTCAGCAGTCATTGGTTCCTGTTCAAAGCCTTACTTCACATACCCATGGCAATTTCGCAGAACAGAGGATTATGAACAAAAGTACGTCCCTTAATTCTGGTACAGCATTTATGACCGACCAAAGCTTGAATACTGAAGTCATCCAACAAGGCATGTGTCCCACTTCCTTGGGCGAGCAGAATCAGCTCGGCCTATCACATCCTTCAACAACGATAGCATCGGCAGCGTTTACAGGCAGCAAAGATCTGTCTTCAACTTGCAAAGCTGGCTGTAGATTGTTTGGTTTTTCATTGACAGAGGAAAAAAATGTTGGGAATACAGACAAGGGTTCTCCAACAACAAATCCCATTAATGCAGGAACAACCACTGTATTGTCCAATATTGGAGTACAATGTCCTTTGAAGTCTCCCCTGATGAGCAAGGTGGTTGGAAGCAACTGTACCAAAGTAAGTAACTTATCTGCCCGTGCCGTAGAGGCGATATATTTTGCATAAACATATTCGATGATTGGATCTTGGAAGATCGCTACTTGACATAGACATTTTATACCTGAATTCTGAAAGGTCTCCTCTGCAATCAGGCTATTGTAGATACTCAGCTTCTAATTATCGTTTTTGTTTTTCAAAGAAAGAAAGGTTGGATAAAAAAGAAAGCATTAGCCAATGAAAAAAGCTTTGTCACAGCCTGATAAATCTGATCTGCATTGTGATGCAGGGGGCTTTTCAGTACCACTTTGCAAATTACAGTACCTACTACTGAATGAGTCTGACTTATTTGGAGGCAGCAAAGAACATTTGGGGTTTAAAAAAAAAAAAAAAGACTGCTGCTTACTTTTGTTGTCTTGAATTACAAACAATGCTTGTGCAGGTGTTGAACACCTTTGAAATCCTCTAGTTTTAGGACGTCAATTTGGTTTGAGTTATCAAACGAAAAGAACACCTGGTGTTTTGTGTTGATTGTAATGATATCCATTTGTTGTTGTTGACCTTGTACCTCAGATTATAATTTGTGTATTGTTTAATGTTTAGACTGACGGTGCTAAGTAAAAGTTATTCCA 3503 42.56 MGALIDLNTTEEDESPSSAGSSVSSSSASALTSSPSPSVTSSICLELWHACAGPLTSLPKKGSLVVYLPQGHFEQMQEFPATPCDLPPHILCRVIDVQLHQAEPGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNASSIMDVVNAISTKSSFSVYYNPRATSSQFVLPFHKFLKSINHSFSVGMRFRLSFETEDAADRRHTGHITGVGDVDPIRWPGSRWRSLLVRWDDGETNRHGRVSPWEIEPSGSVSLSSNLVPPGLKRTRIGLSSTKLEFPVPNGIGASDFGESLRFQKVLQGQEILGYSTPTDGDENNRNPPEKRRLFPGLHGSGIALMRNSPRNPLINSETSSRGIMFDESFQYHKVLQGQEIFPSPFYGRAVATNEVKVSGGRGPVDGIRMSRTKDGWPITMQCENFLTRSSIPSVQVSSPSSVFMFQQSLVPVQSLTSHTHGNFAEQRIMNKSTSLNSGTAFMTDQSLNTEVIQQGMCPTSLGEQNQLGLSHPSTTIASAAFTGSKDLSSTCKAGCRLFGFSLTEEKNVGNTDKGSPTTNPINAGTTTVLSNIGVQCPLKSPLMSKVVGSNCTKVSNLSARAVEAIYFA 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7346221 7351646 + XM_039026155.1 Bhi03g00353 29130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00353 732 Pfam B3 DNA binding domain 151 252 IPR003340 GO:0003677
Bhi03g00353 732 MobiDBLite consensus disorder prediction 10 36 - -
Bhi03g00353 732 SUPERFAMILY DNA-binding pseudobarrel domain 146 260 IPR015300 -
Bhi03g00353 732 SMART B3_2 151 253 IPR003340 GO:0003677
Bhi03g00353 732 MobiDBLite consensus disorder prediction 1 36 - -
Bhi03g00353 732 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 34 723 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi03g00353 732 CDD B3_DNA 149 251 IPR003340 GO:0003677
Bhi03g00353 732 PANTHER AUXIN RESPONSE FACTOR 3 34 723 - -
Bhi03g00353 732 Gene3D - 314 388 - -
Bhi03g00353 732 Pfam Auxin response factor 278 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi03g00353 732 ProSiteProfiles B3 DNA-binding domain profile. 151 253 IPR003340 GO:0003677
Bhi03g00353 732 Gene3D - 149 253 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00353 Bhi-Chr3:7346221 Bhi10g00565 Bhi-Chr10:12531418 1.37E-145 dispersed
Bhi03g00352 Bhi-Chr3:7346220 Bhi03g00353 Bhi-Chr3:7346221 0 tandem
Bhi03g00353 Bhi-Chr3:7346221 Bhi03g00354 Bhi-Chr3:7346226 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
553 PF02362 B3 1.60E-21 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00353 K14486 - csv:101220018 1268.06