Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00354 GGGCGAGCCGTACACAAATCGCTGTTTATTCAGTTTCTGATATTATAATGGTGGAATTTAACTAACCAATGCTTACTCCTACTTTCTTTTTCTTTTTTCTTTTTTTTCTTTTCTTTTTCTTTTCTCTCTCTCTCTCTCTCTCTTCTTCTTCGTCTTTCTGCCATACATCACTCCTTGCAGTCGCAGTATTGCAGCGGCTGCAGTACTGCTCCAGTTCAGTCTCTCTGCACAGCCACACAGAGAAACAAAGAAAGAAAAAGGGAGGTGAAAATTATATCAATTCCTTTCCCCCCATTTCTCTTTTCTATCTCTTTTCTTACTTTTCTTTCAAATTAACCCATCAAATCTTGATTTGATTTTGATTTTCCCCAAAACCCATTTCCAAAAAGAAAAGAAATATACGAAATTTGGGTGTAAGAGAGAAAAAGGGGTCGAGAGAAACAGAGGTGTTTGTGTTTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGTCTGGTCTGTGTTGTTTTCTGAGTGAAAGACCCTCTTTTAGCATTAGCGAAGGTGCACCCATTTCTAAAAATGCAGGCATGAGCTCCTCCTCTTCTTACCTCGCACTCTTTCTTCTTCCGTTCCTGAAACTCTCAGAAACCCTTCGTCTTTTCAGGCTTCTATTTAACCACTTCTTTCTTATTCTTCTACTTCTATTGCTGCACGCCTCCTCTTCTTTCTTCTAGGGCTACCATTCAAATGGGTGCTCTCATCGATCTTAATACCACTGAAGAAGATGAATCTCCCTCTTCTGCTGGTTCTTCTGTTTCTTCTTCCTCCGCTTCTGCTTTAACCTCCTCTCCTTCTCCTTCTGTTACTTCCTCAATTTGCTTGGAGTTATGGCATGCCTGTGCTGGTCCTCTCACGTCTTTGCCCAAGAAAGGGAGTTTGGTTGTGTACTTGCCGCAGGGTCACTTCGAACAGATGCAAGAATTTCCGGCTACGCCTTGTGATCTTCCTCCCCACATCCTCTGTCGCGTCATTGATGTTCAGCTTCATGCTGAACCTGGGAGTGACGAGGTTTATGCTCAGGTTTCGTTGTTTCCTGAAAACGAGCAAATGGAGCATAAGATGCAGGAAGAGATGAACAATGACAGTGAGGAGGAGGATGTTGAAGAAGGTGAGAAGACTACAACACCCCACATGTTCTGTAAGACCCTTACCGCTTCTGATACTAGTACTCATGGAGGCTTCTCCGTCCCTAGACGTGCAGCTGAGGATTGCTTCCCGCCATTGGATTATAACCAACAGAGGCCTTCACAAGAGCTTGTAGCAAAGGATCTCCTTGGGCTAAAATGGAAGTTCAGGCACATATATCGTGGGCAGCCTAGAAGGCATTTGCTAACCACTGGATGGAGTGCTTTTGTGAATAAGAAAAGGCTTGTTTCTGGAGATGCAGTGCTTTTTCTTAGGGGCAATGATGGTGAACTAAGACTGGGAATTCGAAGAGCTGCACAGCTTAAAAGTGGTTCGGCCTTTTCTAATATTTGCAGTCAGCAGCTCAATGCTAGTAGTATCATGGATGTGGTTAATGCAATATCTACGAAAAGTTCCTTTAGCGTATACTACAATCCCAGGGCTACCTCTTCACAGTTTGTCTTGCCTTTTCACAAGTTCTTGAAGAGCATTAACCATTCTTTCTCTGTTGGAATGAGGTTTAGGCTGAGTTTTGAAACCGAAGATGCTGCAGATAGAAGACACACTGGACATATAACTGGAGTTGGCGATGTGGATCCTATTAGATGGCCAGGATCAAGGTGGAGGTCCCTTTTGGTGAGGTGGGATGACGGTGAAACTAACAGGCATGGCAGGGTTTCCCCTTGGGAGATCGAGCCCTCTGGTTCTGTTTCTTTGTCAAGCAACTTGGTTCCACCTGGTCTGAAGAGAACCAGGATTGGGCTCTCTTCCACAAAACTAGAGTTTCCAGTTCCAAATGGGATTGGAGCATCAGACTTTGGGGAATCTTTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTAGGTTACAGTACTCCTACTGACGGTGACGAGAACAATCGTAATCCACCCGAAAAGAGGAGATTGTTTCCTGGTTTACATGGTTCTGGGATAGCTCTGATGAGAAATAGTCCAAGAAACCCACTTATCAACTCAGAAACTTCCTCCCGGGGTATCATGTTTGATGAATCCTTCCAATACCATAAGGTCTTGCAAGGTCAAGAAATATTTCCAAGTCCCTTTTATGGTAGGGCCGTGGCCACCAATGAAGTCAAGGTAAGTGGTGGTCGTGGTCCTGTCGATGGCATTCGAATGTCTAGGACTAAAGACGGATGGCCCATAACAATGCAATGTGAAAATTTCCTCACACGGTCTTCCATTCCTTCTGTACAAGTCTCATCACCATCTTCTGTATTCATGTTTCAGCAGTCATTGGTTCCTGTTCAAAGCCTTACTTCACATACCCATGGCAATTTCGCAGAACAGAGGATTATGAACAAAAGTACGTCCCTTAATTCTGGTACAGCATTTATGACCGACCAAAGCTTGAATACTGAAGTCATCCAACAAGGCATGTGTCCCACTTCCTTGGGCGAGCAGAATCAGCTCGGCCTATCACATCCTTCAACAACGATAGCATCGGCAGCGTTTACAGGCAGCAAAGATCTGTCTTCAACTTGCAAAGCTGGCTGTAGATTGTTTGGTTTTTCATTGACAGAGGAAAAAAATGTTGGGAATACAGACAAGGGTTCTCCAACAACAAATCCCATTAATGCAGGAACAACCACTGTATTGTCCAATATTGGAGTACAATGTCCTTTGAAGTCTCCCCTGATGAGCAAGGTGGTTGGAAGCAACTGTACCAAAGTAAGTAACTTATCTGCCCGTGCCGTAGAGGCGATATATTTTGCATAAACATATTCGATGATTGGATCTTGGAAGATCGCTACTTGACATAGACATTTTATACCTGAATTCTGAAAGGTCTCCTCTGCAATCAGGCTATTGTAGATACTCAGCTTCTAATTATCGTTTTTGTTTTTCAAAGAAAGAAAGGTTGGATAAAAAAGAAAGCATTAGCCAATGAAAAAAGCTTTGTCACAGCCTGATAAATCTGATCTGCATTGTGATGCAGGGGGCTTTTCAGTACCACTTTGCAAATTACAGTACCTACTACTGAATGAGTCTGACTTATTTGGAGGCAGCAAAGAACATTTGGGGTTTAAAAAAAAAAAAAAAGACTGCTGCTTACTTTTGTTGTCTTGAATTACAAACAATGCTTGTGCAGGTGTTGAACACCTTTGAAATCCTCTAGTTTTAGGACGTCAATTTGGTTTGAGTTATCAAACGAAAAGAACACCTGGTGTTTTGTGTTGATTGTAATGATATCCATTTGTTGTTGTTGACCTTGTACCTCAGATTATAATTTGTGTATTGTTTAATGTTTAGACTGACGGTGCTAAGTAAAAGTTATTCCA 3495 42.58 MGALIDLNTTEEDESPSSAGSSVSSSSASALTSSPSPSVTSSICLELWHACAGPLTSLPKKGSLVVYLPQGHFEQMQEFPATPCDLPPHILCRVIDVQLHAEPGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNASSIMDVVNAISTKSSFSVYYNPRATSSQFVLPFHKFLKSINHSFSVGMRFRLSFETEDAADRRHTGHITGVGDVDPIRWPGSRWRSLLVRWDDGETNRHGRVSPWEIEPSGSVSLSSNLVPPGLKRTRIGLSSTKLEFPVPNGIGASDFGESLRFQKVLQGQEILGYSTPTDGDENNRNPPEKRRLFPGLHGSGIALMRNSPRNPLINSETSSRGIMFDESFQYHKVLQGQEIFPSPFYGRAVATNEVKVSGGRGPVDGIRMSRTKDGWPITMQCENFLTRSSIPSVQVSSPSSVFMFQQSLVPVQSLTSHTHGNFAEQRIMNKSTSLNSGTAFMTDQSLNTEVIQQGMCPTSLGEQNQLGLSHPSTTIASAAFTGSKDLSSTCKAGCRLFGFSLTEEKNVGNTDKGSPTTNPINAGTTTVLSNIGVQCPLKSPLMSKVVGSNCTKVSNLSARAVEAIYFA 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7346226 7351646 + XM_039026156.1 Bhi03g00354 29131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00354 731 Pfam Auxin response factor 277 357 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi03g00354 731 MobiDBLite consensus disorder prediction 10 36 - -
Bhi03g00354 731 SUPERFAMILY DNA-binding pseudobarrel domain 145 259 IPR015300 -
Bhi03g00354 731 SMART B3_2 150 252 IPR003340 GO:0003677
Bhi03g00354 731 MobiDBLite consensus disorder prediction 1 36 - -
Bhi03g00354 731 ProSiteProfiles B3 DNA-binding domain profile. 150 252 IPR003340 GO:0003677
Bhi03g00354 731 Pfam B3 DNA binding domain 150 251 IPR003340 GO:0003677
Bhi03g00354 731 Gene3D - 148 252 IPR015300 -
Bhi03g00354 731 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 34 722 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi03g00354 731 CDD B3_DNA 148 250 IPR003340 GO:0003677
Bhi03g00354 731 Gene3D - 313 387 - -
Bhi03g00354 731 PANTHER AUXIN RESPONSE FACTOR 3 34 722 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00352 Bhi-Chr3:7346220 Bhi03g00354 Bhi-Chr3:7346226 0 dispersed
Bhi03g00354 Bhi-Chr3:7346226 Bhi10g00565 Bhi-Chr10:12531418 2.44E-147 dispersed
Bhi03g00353 Bhi-Chr3:7346221 Bhi03g00354 Bhi-Chr3:7346226 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
554 PF02362 B3 1.60E-21 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00354 K14486 - csv:101220018 1272.69