Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00366 ATGAAGCTAACTTAAAAGTTCATCAAAATTCAGAAGAAGCACATGGGAAGGGGATTTTGGGAGTGGTGGTAAATTAAAAAAGAGAAAATTGGAAACAAAATAAAAAGAAAAAGTCTTGTTTGACATTCATTAAAAAGCGTTTATAAGAAAAGAAATTAAAGAAATTAAAGAGAATTATGGGAGGTTGGATTAGAGTGAGAGAAGACTGTTGGTTATTTGTTCCTGAATTTGCCTTTTCCTATAATTTCTTGTTTCTTTTCTCATCATTTATTATTCTTTTATTATTATTTTTGTTATTCGATGATGATAATTCTTCTATACTGCTTTTCTGTTCCTTGACTATTACGGTATTTAGGTTAAGTGGGGAAAGGGAAATTCGTAGTTCGATTGCTTCGGGCTTTTCAATTTTGTTTTGGAAGAGTGTTTTTGGTTTTTGATTCTAGGGTTTGGCTGTTCTGTGTTTTTTTTTCCTTCTTCCTTCGATCTTCATCTTCGGATTCGATGGAAGCTGCCGCTTCCGACGGCGAAAATCACAACCTGAATAATGATAATATTAACAAAATTAGTAACTCAAGTGAGGGTCTTAGCAAGCCCAAGCGCCAGATGAAGACTCCGTTTCAGCTTGAAACCCTCGAGAAAGCCTATGCTTTGGAGACTTACCCATCAGAGTCGACAAGGGCTGAACTGTCGGAGAAATTGGGGCTCACCGATCGGCAATTGCAGATGTGGTTTTGTCATAGGAGGTTGAAGGACAAGAAGGAACCGGCGAAGAAACCCCGGAAGGTGGCACCTGCACCCCCCTTGCCGTTGCCTGATTCTCCCATTGACGAATTGAGAGTAGTGGCCGAGCCGGGTAGTGATTACGCCTCAGGGTCGGGCTCGGGTTCAAGTCCATTTGGTGATGTTGGGTTGCGTAATGTGGTACCTAGAGGTGTTGGAGATGATATGCCAATGATGAGAAGGTATTATGAACCTTCACGGTCTGTTATGGAACTTAGAGCTATTGCTTGTGTGGAGTCGCAGTTAGGAGAGCCATTGAGGGAGGACGGACCTATTCTTGGGATTGAATTTGATCCATTACCACCTGATGCTTTTGGAGCACCTATAGTGGCAGAACAGCAGAAGCGATCTGGACATTCGTATGGGGACAAATATGAACAACGGGATGCAAAATCAAATAAAGTGACTGCAAGGGGATTCCCTGAATATCCATTTATGCCAGACCAGTCTAATATTAGAGCTGATGCGTATGGTCCAGTTTCCCAACCACATTATCCAGATTCATTAGGCGAGGTTTCAGCAGCCAGGACACCATCATTTTTGCATGGTCATGAACAGTTGAACAGGAACCATAATTACCACAGTCAGGTCTCAAGGGTTCGCCTTCTGTCTCAACAGGAGAAGCAGGGAATTGCAATTCCATCTTCTGCTGAAGACAATGCATTTGCCCCTCCAAGGGATTCTTTTGCAAGTATCAGAATGAATTCTCAGTTTACTGAACACCCAATTGTTGAACAAGAAAATTCGTATGTGTTGCCTGATGGGCATGTTTATCCAAACGATGTCATGATTAGGATGGAAAGGAAACGCAAGAGTGAAGAAGCTCGTCTGAGTAAAGAAGCTGAAGCGCATGAAATGAGAATGCGGAAAGAGCTTGAGAAACAAGATATTCTGAGGAAAAAGAATGAAGAACGAATGAGGAAAGAAATGGAAAAGCAAGATCGTGAAAGGAGGAGAGAAGAGGAGAGGTTACTGCGAGAAAAGCAGCGGGAAGCTGAGAGATTAAAGCGTGAGGAAAGACGTGAACATGAACGGAGGGAAAAGTTTCTGCAGAGGGAGTATGTGAGGGCTGAGAAGAGGAAACAAAAAGAAGCTATTCGCAAAGAGAAGGAAGCTGTGAGACGCAAAGCTGCTATTGAGAAGGCTACTGCTCGTAGAATTGCCCGTGAGTCTATGGAGCTTATTGAGGATGAACAGCTTGAACTGATGGAACTGGCTGCTGCAAACAAAGGATTATCCTCCATATTAAGTCTTGATCATGACACTCTGCAGAATCTTGAATCTTTCCGAGATTATCTTGGTGCATTTCCACCCAAGTCTGTGCAACTGAAGAAACCTTTTGGCATTCAGCCTTGGGTCAATTCAGAGGAGAACATTGGTAACCTTCTCATGGTCTGGAGATTTTTTATTACATTTTCTGATGTTCTAGAGCTGTGGCCCTTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGATTATGATTCTAGATTGCTGGGTGAGATTCACATTTGCCTTCTGAGACTGATCGTAAAAGATATTGAAGATGTTGCAAGAACACCTTCTGCTGGAATGGGAATGAACCAGAATGGTGTTGCTAACTCTGGAGGTGGACATCCACAGATTGTTGAAGGGGCATATGCGTGGGGGTTTGACATTTGCAACTGGCAGAAGCATTTAAACTCGTTAACATGGCCTGAAATATTTCGGCAATTAGCACTATCAGCAGGATTTGGACCTCAGTTGAAAAAGAGGAGTTTGGCAATGTCTGAAATGCGTAGCAATGATGAGGCTAAATGCGGCGAGGACGTTGTTTCTACTCTACGGAATGGTTCAGCAGCTGAAAATGCATTTGCTATCATGCAAGAGAAAGGTTTGTTAGCACCTCGGAGATCTAGGCATCGGCTAACTCCTGGAACCGTCAAATTTGCTGCTTTTCATGTCCTTTCCCTAGAAGGCAGCGAGGGGTTAACAGTACTAGAACTTGCAGAGAAGATACAGAGATCTGGACTTAGAGATCTGTCTACAAGCAAGACACCCGAGGCTTCCATTTCTGTTGCTTTGACAAGGGATACTAAGCTCTTTGAAAGAATAGCTCCTTCCACGTATCGTGTACGAGCTCCCTACAGGAAGGATCCAGATGAGGCCGAGGAAATACTCTCAGTAGCCAGAAAGAAAATTCAGGTATTTCAGAATGGGTTTTTGGCTGGAGAAGATGCTGATGATGTTGAAAGAGACGAAGAATCTGAATGTGATGATGTTGATGAAGATCCTGAAGTTGATGATATAGCAACGACTTCCTTGGTGAATGAAGATGTTAGCAAAGGAGATGCTAACTTAGGAATCGAGAATGAGAACTTATGTCATGATATTTCTGGAAATCCAAAAAATGAAAATGCCAAAGATATATCATCCTTCCCCCTAAGTGGCTCTACGGGCACAAAATATTTAAACATGCCTACAGAGCAGTATGCTGCTGTTGATGAGACCATTATTAGTGATCTTGATCAAGAAAATATGGAGATTGATGAAAGCAAGGAAGGTGAATCATGGATTCAAGGACTTACAGAAGGTGAATATCATGATCTTAGTGTTGAGGAGCGCTTGAATGCCCTTATCGTCTTGACCAGCATTGCAAATGAAGGAAACTCTATTCGCCTTGTTCTTGAGGATCGCTTGGAAGCTGCGAATGCTGTTAAGAAGCAAATGTTGACAGAGGCTCAGATTGATAAATCTCGCCTAAAAGAAGAGATCATTACTAAATCTGATTTTCCTATTCATATAGTGAGCAAGGTGGAAACTGAACTCAATGGTTCCACTATGGACGGCGGGCAAAGCCCTTTTCCTGTTGCCGACAATAAGAACAATGAAACAACCTCAAGCACTGCTGAAAACCTTGGTAGTCTGCCTAATGAGAGGGGTACTTTAGTACCGGATCTTTTCCTAGGCCCGGATAACTTCTTGGCTCAGCAATGTGGACATGCTTCAAAGAGGTCACGTTCACAGTTAAAATCTTATATTGCCCATAGAGCTGAAGAAATGTACACATATAGGTCTTTGCCTCTTGGTCGAGATCGTAGACGTAACCGGTACTGGCAATTTGTTGCATCTTCTTCAAGTAATGATCCTGGTTCTGGGAGAATCTTTGTTGAAATGTATGATGGAAAGTGGAGGCTTATTGATTCTGAAGAGGGTTTTGATGCTCTTTCATTGGCTTTGGACACACGGGGCATAAGAGAATCACACCTACGCATAATGTTACAAATGATAGAGACACCATTTAAGGAAAATGTTCGGAGGAATCTGCAGTGTGCCAATGAGATGGTTCGAAGTGGAATTACGCCTAAAAATGAAAATGATGATTCGAGTTCTAGTCCTGATTGCAACACTGGTTTCAATAGTCCTAGCAGTACTGTTTGTGGGTTAAATACGGATACGATGATAACATCATCTTCATTCAGAATTGAGCTTGGGAGAAATGAAAACGAAAAGAAGGCTGCATTTAGACGGTATCAAGACTTGCAGAGGTGGATGTTGAGAGAGTGCTTTAGCACATCAACACTATGTGCCATGGAATTTGGAGAAAAAAGGTGCACTGCACTGTTGGACATTTGTGATTCTTGTCTGTGCTTGTTTGATTCTCAACATTCTCATTGTCCTTCGTGCCATCGAACTTTTGGTATTAGTGGGAATGATATTAATTTTCTGGAACAACAACGTCATTGTGAGAGGGAAAGGAAGTCTAACCCTTTGGATACACACGTTTTAGATGCATCTCTCCCCCTCAAAAGTAGGTTGCTCAAGGCTCTCCTAGCTTTCATTGAGGTACATGTTCCGTCAGAAGCTTTTCAATCGTTTTGGACAGAACATAGGAAAGATTGGGGTGTCAGGATGAAATTATCATCTTCTATTGAGGAGCTTTTACAGATATTGACCCTGTTTGAAAGTGTAATTAAGCGGGACTTTCTAAAATCAGACTTTACTACAACTGACGAGCACCTAAGCTCATGTTCCATCTCTGGAAATATTATACATGATCCAGCAGATATTGGGTCTGTTCTTACATTACCGTGGATTCCACGGACTAGCGCAGCCATTGCTTTAAGGCTTTGTGAGCTAGATGCTTCGATTTATTATATTGGATGTGAGAAACCAGAGCCTGACCAGGATAAGGAAGTCGGAGAACATATGAACTTTTCCAGTAGATATGTCCAGGTTAAGAATGATGAACGGACTAAACTAAATGAGTTGGATTATGATGATCTAATGAAGAATGAAAACTCAGCCGATCCAAAAAGTTTAAGGAACAGCTACAAACGCGGTCGAGGGAGTCGAGATTATGGACGTCGTAGAAAGTGGCAGAAAAAAGTTAATGGATCTAGATCTGGTCGGGTCCGGCAAAATGTCAAGAGTAATGAGAATGTGAATCAAGAACAGAGGGAGCTGGGACAAGGAACACAGGTTATGGGCGTACGGGGTCGCCGTACGGTAAGGAAGAGAAGGGCTGAGAAGAGCATTCCTGATGAAGGACTTTTGGGGCTGGTTCCTAGTAGTAGTACTCAGAACATGGATGAATCCCCAAAAGATTATCTTGGGGAATGGGAGGACGAAAAAATGGAGAGGTTCGTCGATATGGAAGATGAAGGGAACATGATGGAAGATGAAGAGAATGTGATGGAAGATGAGGAAAATGAAGAGAATGTAAACAACGTAGAAGCGATGGACTCTGACGATGATGGCCAGGGAGTTGGGTATGAGCAAGGGGGCTGGGAGTTTGGCTTCGAAAGCACTTCCAACAGATGGAATGGTGATTTAGGGATAGGTAGTGATGAGGATGTAGATTTATCTGAGGACTACAACGGCACTGAAGAGGGGGGAAACGATGATCTAGAGGAGTTAGATGTTGATAGCAGCGAGGAGTCGGATTGTTCACCAAATAGAATAGGCAACAATGGTGGAGGAGAATCCCCTGTTTCAGACGACTATAGTGATTAAATAAATATCAGACATTAAGAAGCTGCGTAATTTTGATACCCTTCACTAGCGGCTGAAATTGTGTACAGGGGAACAGAATAGCAGTTTCCCCAAAACCAAATATATTGTAGTTTTAGATCCCCCCATGACTGGCATTACCTAGATGATCTGTAGTCTAATTTATTGGTGAAAAATGTATCATCCTATCTTAGAGTAATTATTTGATAATAAAAATTTGTAAAGTTATAGTTGCTACATGATGTTGTACATGGGGAAAAACTATATTAACTCTTGATCACACTGTAGAATCGTTGAAATTTTACAAGGCTCTGTTTTATTTCTAAGATCTATTCTCTCTCTATTTATTCAATTTTCTACTTCCATGTTCATGCGTACACTTAGTGTCTCTGACAAGTACGATAACAGAATTTCATCATTATACTTAAAAAATACCTATAACTATCATTCAGAAACATCGCTCTTTCTTAACAGACACATCTCAACAACTTAACATGCTCAAATTCAGCTTTTCGTGCCGAAGTATCCACATATTTGTTGTTTCTTCCTGTTGCCATACCTCACCTCAAACACGAGGAAGCCTCGAGTACAGCGTTTGAAAAAACAGATTTGAATTACAATTACAGACCCTCTTAAAATACTTTTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTACAAGAGTGGAGCAA 6460 41.38 MEAAASDGENHNLNNDNINKISNSSEGLSKPKRQMKTPFQLETLEKAYALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKKEPAKKPRKVAPAPPLPLPDSPIDELRVVAEPGSDYASGSGSGSSPFGDVGLRNVVPRGVGDDMPMMRRYYEPSRSVMELRAIACVESQLGEPLREDGPILGIEFDPLPPDAFGAPIVAEQQKRSGHSYGDKYEQRDAKSNKVTARGFPEYPFMPDQSNIRADAYGPVSQPHYPDSLGEVSAARTPSFLHGHEQLNRNHNYHSQVSRVRLLSQQEKQGIAIPSSAEDNAFAPPRDSFASIRMNSQFTEHPIVEQENSYVLPDGHVYPNDVMIRMERKRKSEEARLSKEAEAHEMRMRKELEKQDILRKKNEERMRKEMEKQDRERRREEERLLREKQREAERLKREERREHERREKFLQREYVRAEKRKQKEAIRKEKEAVRRKAAIEKATARRIARESMELIEDEQLELMELAAANKGLSSILSLDHDTLQNLESFRDYLGAFPPKSVQLKKPFGIQPWVNSEENIGNLLMVWRFFITFSDVLELWPFTLDEFVQALHDYDSRLLGEIHICLLRLIVKDIEDVARTPSAGMGMNQNGVANSGGGHPQIVEGAYAWGFDICNWQKHLNSLTWPEIFRQLALSAGFGPQLKKRSLAMSEMRSNDEAKCGEDVVSTLRNGSAAENAFAIMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYRKDPDEAEEILSVARKKIQVFQNGFLAGEDADDVERDEESECDDVDEDPEVDDIATTSLVNEDVSKGDANLGIENENLCHDISGNPKNENAKDISSFPLSGSTGTKYLNMPTEQYAAVDETIISDLDQENMEIDESKEGESWIQGLTEGEYHDLSVEERLNALIVLTSIANEGNSIRLVLEDRLEAANAVKKQMLTEAQIDKSRLKEEIITKSDFPIHIVSKVETELNGSTMDGGQSPFPVADNKNNETTSSTAENLGSLPNERGTLVPDLFLGPDNFLAQQCGHASKRSRSQLKSYIAHRAEEMYTYRSLPLGRDRRRNRYWQFVASSSSNDPGSGRIFVEMYDGKWRLIDSEEGFDALSLALDTRGIRESHLRIMLQMIETPFKENVRRNLQCANEMVRSGITPKNENDDSSSSPDCNTGFNSPSSTVCGLNTDTMITSSSFRIELGRNENEKKAAFRRYQDLQRWMLRECFSTSTLCAMEFGEKRCTALLDICDSCLCLFDSQHSHCPSCHRTFGISGNDINFLEQQRHCERERKSNPLDTHVLDASLPLKSRLLKALLAFIEVHVPSEAFQSFWTEHRKDWGVRMKLSSSIEELLQILTLFESVIKRDFLKSDFTTTDEHLSSCSISGNIIHDPADIGSVLTLPWIPRTSAAIALRLCELDASIYYIGCEKPEPDQDKEVGEHMNFSSRYVQVKNDERTKLNELDYDDLMKNENSADPKSLRNSYKRGRGSRDYGRRRKWQKKVNGSRSGRVRQNVKSNENVNQEQRELGQGTQVMGVRGRRTVRKRRAEKSIPDEGLLGLVPSSSTQNMDESPKDYLGEWEDEKMERFVDMEDEGNMMEDEENVMEDEENEENVNNVEAMDSDDDGQGVGYEQGGWEFGFESTSNRWNGDLGIGSDEDVDLSEDYNGTEEGGNDDLEELDVDSSEESDCSPNRIGNNGGGESPVSDDYSD 1756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7628123 7642129 + XM_039025103.1 Bhi03g00366 29143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00366 1756 SMART HOX_1 29 91 IPR001356 GO:0003677
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1552 1576 - -
Bhi03g00366 1756 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT1 4 1756 - -
Bhi03g00366 1756 Coils Coil 391 469 - -
Bhi03g00366 1756 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 4 1756 IPR044977 GO:0006357
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1648 1665 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1029 1061 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 8 31 - -
Bhi03g00366 1756 Pfam Homeodomain 30 86 IPR001356 GO:0003677
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1734 1756 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1510 1620 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1702 1731 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1 40 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 393 416 - -
Bhi03g00366 1756 ProSiteProfiles HARE-type HTH domain profile. 731 800 IPR007759 GO:0006355
Bhi03g00366 1756 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Bhi03g00366 1756 Gene3D - 21 97 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 210 226 - -
Bhi03g00366 1756 Pfam DDT domain 550 605 IPR018501 -
Bhi03g00366 1756 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 85 107 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1648 1756 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1510 1535 - -
Bhi03g00366 1756 CDD homeodomain 32 87 IPR001356 GO:0003677
Bhi03g00366 1756 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1110 1180 IPR028941 -
Bhi03g00366 1756 Pfam HB1, ASXL, restriction endonuclease HTH domain 731 799 IPR007759 GO:0006355
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 1536 1551 - -
Bhi03g00366 1756 MobiDBLite consensus disorder prediction 206 226 - -
Bhi03g00366 1756 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 939 979 IPR028942 -
Bhi03g00366 1756 ProSiteProfiles DDT domain profile. 549 608 IPR018501 -
Bhi03g00366 1756 Coils Coil 1637 1657 - -
Bhi03g00366 1756 SMART testlast3 549 608 IPR018501 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00366 Bhi-Chr3:7628123 Bhi09g01604 Bhi-Chr9:43026378 9.76E-68 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
556 PF15613 WSD 3.50E-13 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00366 - - cmo:103484497 2980.66