Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00472 ACTTCCTTCTCTTTTATAAAAACATTTGCTTTCTTTCATATCTGCATCTCGCCTTTTTTATTTCTTCTCTACTGGAACAGGGTGCTCTTACAATTCCAAAATTTTATTTTCAAAAAAGAAAAGGGAAAAAGGAGGCTACAAAAGCTGCGAGGACAGGGAAAACCATTCCCCATTACTTCCTTCTTCACTTCTTTCTATTTGCATTTGCTCAATTTGGTATTTCTTTGCTTCTTTTCATTATTCTTTTGTCTCTTTTCATCTCTGGGGGTAAAGATAATCCATATGTTTGGCTAAGGAGGCTGACCCATCTTTTCCTTTTGTTGATTTTTGGGCTTCTTTACCTTATTTTCTCCATCGTCGGGTTGTGGGTTTTTGATCTTTGATGCTTTGGAGTTTTGGGGTTGTGCGACGGTGAAGTGTTTTTATTTGGATGGTGTTTTTGAAGTAGGGGAAGCCTAGGTTTGGCTGATTGATTGTTTTAAAGTTTTGGTGACCAAAAGAAACGAGAAAATTCAAGTGGGGTTTTGAGTAGAGCTCTGTTTGGCTAATGGGTTGTCCAAATTGGAATTTGTTCATGAAGATCCTAATTGGGCTGCTCTTGGTCTTCATCAACCATTTTTGCTTTGGAGATACTGACCTCCGCGATGACAACTCAGTGGCTTGAATTTGGGAGGAGAGCTAGGCACTAGCTTGGACCAATTCGAGTCAATAATATCAATGGATCTTAGCAACAATCATATTGGAGGGAATATTCCATCTACATTGCCCCCTACACTGAGAAGTCTTTCTTTATCAGCTAATCAATTCACTGGAAGCATTCCCCCTGCACTGGCTTCGCTAACACAACTAATGGACCTGTCACTAAATAATAACCTTCTTACCGGGGTAATACCTGATGTCTTCCAGCTGCTTAATGGCTTGAATAACTTGGACTTGTCATGGAACAACTTGAGCGGTCAGCTGCCTCCCTCGGTGGCTGATTTGTTATCCCTTACTACATTGCACTTGCAGAACAATCAACTTTCTGGGATGCTCGACTCTCTACAGGATCTTCCATTGTCGGATTTGAATATAGAGAACAACCTATTTTCCGGACCTATACCTGCAAAGTTGTTGGGCATTCCAAATTTCAGAAAAGATGGGAACCCTTTTAATACTACAATAATTTCATCTGCACCTGCTTTAGCCCCTTCACCATTTGCTGTTGCACCAGTTACTGTGGGACAACCAACCAGACAGGCAGGTGCAGGTCAGCCATTGTTGTCGGGGACTCCTGAAGCGGATGGAGCAAGGAGTTTTTTCTCTGCTAAGCATATCGTTTGGATTGTTATTATTGGCACAGTACTATTAGTAGCATTTGGATTCTGTCTTCTCATGTTGATATGCTTAAAAAGAAGCAAGCATCGAGAAGACACCAAGGTGGTTCGTGACAATGCTGATATGGCCTCTAAATATAAGCCTAAACCCATGAAGCCCTCAGTTGAAGGTGTAGACATGGAGAAAGGTCCAACGGAGACCACTTTTAAGCCACTTGATAGAGACAGAATAAAGGATAGAATAATGGATTTTTCCACCCCAAGGCTACATGATAGACAGGGTACAAATGGGAAAAGAAAAGATGCCTCTAATACAAGTTTCCGTAGAGACCATATGGAGAGTTCGAGCATAAGCATAGATGACTTCCCTTCACCGCCTCCTCCCCCTCCTTTTCCGCTCCTTTCAACTCAGGAAATTGCAAAACCAATTGTGGCGGCTGAAGTGCCCATTAGAGAACTTAGAAAACTGAATACAAGTTCTTTAAAAGTTTTCACAATCGCATCACTTCAGCAGTATACTAATAGTTTCTCTGAAGACAATCTTCTTGGGAGAGGCATGCTGGGCAGTGTCTATAGAGCTGAACTTCCAAGTGGAAGGCTTCTGGCTGTTAAGAAACTTAATGGATCCTCTTCAACTCATTGGTGTGATGATGAATTTCACAACCTTGTGTCTAACATATGTCAAATTCGGCATGATAATATTGTGGAGCTTGTGGGATATTGTGCTGAGCATGGACAATATCTACTCATTTATGAGTATTGCAAAAATGGCACGCTCTATGATGCACTCCATGTCGACAAGGAGATGCATCAGAAGCTTTCATGGAATGTCCGCGTGAAAATTGCACTTGAAGCTGCACGTGCCCTCGAGTATCTGCATGAAGCCTGTCAACCGCCTATCATGCACCAAAATTTTAAGTCTGCTAACATTCTCTTGGACAATGAGCTAAAACCACAAGTCTCCGACTCTGGCTTAGCTCGGCCGCTGCCTTCAGCTAGTCAGTCATCTGCACGATTCCTCCCAGCTCATGGTTATACTGCTCCTGAATTCGAGTTAGGAACTTACCAAAGTGATGTTTATAGCTTCGGAGTCGTAATGCTAGAGCTTCTGACTGGTCGGAAGTCTTGTGACCGATCACTGCCTCGAGGAGAGCAATTTCTTGTTCGATGGGCTATTCCAAGGCTCCATGATATTGATGCGTTATCAAGAATGGTCGATCCATCTCTTAATGGCATGTATCCCATTAAATCATTATCGCGCTTTACTGATATCATCTCTTCTTGTATAATGAGAGAGCCCGAATTTCGGCCCCCTATGTCTGAAATTGTACAGGAACTCTTACAAATGCTGTAGAAGAAAGTCAGAAATTCAAATGCTTTAGGAGGGTAGAAGATTGAACAAAATGTTGAGCATTAAAAGTTGGTTCCAAAAAGTTGAGGGATGTTTTTGATTGTTCTTTTTTTAATCATTGTTTCATGTGAATATAAGTCATTGATTAGTTTC 2820 41.56 MDLSNNHIGGNIPSTLPPTLRSLSLSANQFTGSIPPALASLTQLMDLSLNNNLLTGVIPDVFQLLNGLNNLDLSWNNLSGQLPPSVADLLSLTTLHLQNNQLSGMLDSLQDLPLSDLNIENNLFSGPIPAKLLGIPNFRKDGNPFNTTIISSAPALAPSPFAVAPVTVGQPTRQAGAGQPLLSGTPEADGARSFFSAKHIVWIVIIGTVLLVAFGFCLLMLICLKRSKHREDTKVVRDNADMASKYKPKPMKPSVEGVDMEKGPTETTFKPLDRDRIKDRIMDFSTPRLHDRQGTNGKRKDASNTSFRRDHMESSSISIDDFPSPPPPPPFPLLSTQEIAKPIVAAEVPIRELRKLNTSSLKVFTIASLQQYTNSFSEDNLLGRGMLGSVYRAELPSGRLLAVKKLNGSSSTHWCDDEFHNLVSNICQIRHDNIVELVGYCAEHGQYLLIYEYCKNGTLYDALHVDKEMHQKLSWNVRVKIALEAARALEYLHEACQPPIMHQNFKSANILLDNELKPQVSDSGLARPLPSASQSSARFLPAHGYTAPEFELGTYQSDVYSFGVVMLELLTGRKSCDRSLPRGEQFLVRWAIPRLHDIDALSRMVDPSLNGMYPIKSLSRFTDIISSCIMREPEFRPPMSEIVQELLQML 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9274978 9279930 + XM_039027825.1 Bhi03g00472 29249

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00472 650 MobiDBLite consensus disorder prediction 283 316 - -
Bhi03g00472 650 Gene3D Phosphorylase Kinase; domain 1 344 453 - -
Bhi03g00472 650 Gene3D Transferase(Phosphotransferase) domain 1 454 650 - -
Bhi03g00472 650 MobiDBLite consensus disorder prediction 283 331 - -
Bhi03g00472 650 MobiDBLite consensus disorder prediction 244 270 - -
Bhi03g00472 650 Pfam Leucine rich repeat 18 78 IPR001611 GO:0005515
Bhi03g00472 650 PANTHER LEUCINE RICH REPEAT KINASE 2 1 650 - -
Bhi03g00472 650 ProSiteProfiles Protein kinase domain profile. 376 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00472 650 ProSiteProfiles Leucine-rich repeat profile. 91 113 IPR001611 GO:0005515
Bhi03g00472 650 SUPERFAMILY L domain-like 2 137 - -
Bhi03g00472 650 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 1 650 - -
Bhi03g00472 650 Gene3D Ribonuclease Inhibitor 1 157 IPR032675 -
Bhi03g00472 650 Pfam Protein tyrosine and serine/threonine kinase 380 646 IPR001245 GO:0004672|GO:0006468
Bhi03g00472 650 SUPERFAMILY Protein kinase-like (PK-like) 358 646 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00472 - - - cmo:103484543 1114.75
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00470 Bhi-Chr3:9274976 Bhi03g00472 Bhi-Chr3:9274978 0 dispersed
Bhi03g00472 Bhi-Chr3:9274978 Bhi05g01832 Bhi-Chr5:57868548 0 dispersed
Bhi03g00471 Bhi-Chr3:9274977 Bhi03g00472 Bhi-Chr3:9274978 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi05g01832 . 34 781 Strubbelig Receptor Gene Family AT4G03390 60.8 1.1e-201 701.0
Bhi03g00471 . 17 750 Strubbelig Receptor Gene Family AT4G03390 51.0 2.2e-159 560.5
Bhi03g00470 . 17 747 Strubbelig Receptor Gene Family AT4G03390 50.8 3.6e-157 553.1
Bhi03g00472 . 1 650 Strubbelig Receptor Gene Family AT4G03390 51.4 4.8e-138 489.6
Bhi09g00253 CCT 393 687 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00252 . 346 640 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00250 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00249 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00251 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi11g02653 . 13 735 Strubbelig Receptor Gene Family AT5G06820 54.3 3.1e-187 652.9
Bhi04g01996 . 22 701 Strubbelig Receptor Gene Family AT1G78980 61.0 3.6e-193 672.5
Bhi01g02817 . 23 719 Strubbelig Receptor Gene Family AT1G78980 51.3 2.4e-152 537.0
Bhi01g02818 CCT 63 577 Strubbelig Receptor Gene Family AT1G78980 50.3 3.1e-128 456.8
Bhi09g00253 CCT 24 690 Strubbelig Receptor Gene Family AT1G78980 50.4 6.1e-124 442.6
Bhi09g00252 . 2 643 Strubbelig Receptor Gene Family AT1G78980 50.2 1.8e-115 414.5
Bhi09g00250 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi09g00249 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi09g00251 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi03g00472 . 354 650 Strubbelig Receptor Gene Family AT1G78980 52.0 5.4e-80 296.6
Bhi04g01996 . 2 679 Strubbelig Receptor Gene Family AT3G13065 52.2 4.3e-146 516.2
Bhi09g00252 . 347 638 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00250 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00249 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00251 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi08g00819 . 306 597 Strubbelig Receptor Gene Family AT3G13065 53.8 9.1e-88 322.4
Bhi08g00818 . 388 681 Strubbelig Receptor Gene Family AT1G11130 53.4 9.4e-85 312.4
Bhi08g00819 . 304 597 Strubbelig Receptor Gene Family AT1G11130 53.4 9.4e-85 312.4
Bhi04g01996 . 392 679 Strubbelig Receptor Gene Family AT1G11130 50.3 7.7e-79 292.7
Bhi11g02653 . 13 735 Strubbelig Receptor Gene Family AT5G06820 54.3 3.1e-187 652.9
Bhi05g01832 . 34 781 Strubbelig Receptor Gene Family AT4G03390 60.8 1.1e-201 701.0
Bhi03g00471 . 17 750 Strubbelig Receptor Gene Family AT4G03390 51.0 2.2e-159 560.5
Bhi03g00470 . 17 747 Strubbelig Receptor Gene Family AT4G03390 50.8 3.6e-157 553.1
Bhi03g00472 . 1 650 Strubbelig Receptor Gene Family AT4G03390 51.4 4.8e-138 489.6
Bhi09g00253 CCT 393 687 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00252 . 346 640 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00250 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00249 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi09g00251 . 332 626 Strubbelig Receptor Gene Family AT4G03390 57.7 2.9e-90 330.9
Bhi04g01996 . 2 679 Strubbelig Receptor Gene Family AT3G13065 52.2 4.3e-146 516.2
Bhi09g00252 . 347 638 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00250 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00249 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi09g00251 . 333 624 Strubbelig Receptor Gene Family AT3G13065 59.9 2.5e-98 357.5
Bhi08g00819 . 306 597 Strubbelig Receptor Gene Family AT3G13065 53.8 9.1e-88 322.4
Bhi04g01996 . 22 701 Strubbelig Receptor Gene Family AT1G78980 61.0 3.6e-193 672.5
Bhi01g02817 . 23 719 Strubbelig Receptor Gene Family AT1G78980 51.3 2.4e-152 537.0
Bhi01g02818 CCT 63 577 Strubbelig Receptor Gene Family AT1G78980 50.3 3.1e-128 456.8
Bhi09g00253 CCT 24 690 Strubbelig Receptor Gene Family AT1G78980 50.4 6.1e-124 442.6
Bhi09g00252 . 2 643 Strubbelig Receptor Gene Family AT1G78980 50.2 1.8e-115 414.5
Bhi09g00250 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi09g00249 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi09g00251 . 41 629 Strubbelig Receptor Gene Family AT1G78980 50.6 7.8e-111 399.1
Bhi03g00472 . 354 650 Strubbelig Receptor Gene Family AT1G78980 52.0 5.4e-80 296.6
Bhi01g02817 . 13 719 Strubbelig Receptor Gene Family AT1G53730 60.6 3.0e-211 732.6
Bhi09g00253 CCT 1 712 Strubbelig Receptor Gene Family AT1G53730 60.0 1.4e-184 644.0
Bhi01g02818 CCT 63 577 Strubbelig Receptor Gene Family AT1G53730 62.3 1.0e-174 611.3
Bhi09g00252 . 2 665 Strubbelig Receptor Gene Family AT1G53730 61.6 3.3e-173 606.3
Bhi09g00250 . 41 651 Strubbelig Receptor Gene Family AT1G53730 65.0 1.4e-171 600.9
Bhi09g00249 . 41 651 Strubbelig Receptor Gene Family AT1G53730 65.0 1.4e-171 600.9
Bhi09g00251 . 41 651 Strubbelig Receptor Gene Family AT1G53730 65.0 1.4e-171 600.9
Bhi04g01996 . 20 687 Strubbelig Receptor Gene Family AT1G53730 51.4 1.5e-154 544.3
Bhi08g00818 . 4 689 Strubbelig Receptor Gene Family AT1G53730 51.4 1.3e-148 524.6
Bhi08g00819 . 2 605 Strubbelig Receptor Gene Family AT1G53730 54.2 8.8e-126 448.7
Bhi01g02817 . 11 714 Strubbelig Receptor Gene Family AT3G14350 51.9 1.5e-183 640.6
Bhi09g00253 CCT 6 702 Strubbelig Receptor Gene Family AT3G14350 55.4 5.8e-167 585.5
Bhi09g00252 . 2 655 Strubbelig Receptor Gene Family AT3G14350 55.9 6.2e-153 538.9
Bhi09g00250 . 41 641 Strubbelig Receptor Gene Family AT3G14350 58.9 1.7e-150 530.8
Bhi09g00249 . 41 641 Strubbelig Receptor Gene Family AT3G14350 58.9 1.7e-150 530.8
Bhi09g00251 . 41 641 Strubbelig Receptor Gene Family AT3G14350 58.9 1.7e-150 530.8
Bhi01g02818 CCT 1 572 Strubbelig Receptor Gene Family AT3G14350 52.2 3.6e-145 513.1
Bhi08g00818 . 201 711 Strubbelig Receptor Gene Family AT4G22130 68.2 1.3e-177 620.5
Bhi08g00819 . 118 627 Strubbelig Receptor Gene Family AT4G22130 68.1 6.5e-177 618.2
Bhi01g02817 . 398 719 Strubbelig Receptor Gene Family AT4G22130 65.7 2.1e-122 437.2
Bhi01g02818 CCT 256 577 Strubbelig Receptor Gene Family AT4G22130 65.7 2.1e-122 437.2
Bhi09g00253 CCT 391 704 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi09g00252 . 344 657 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi09g00250 . 330 643 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi09g00249 . 330 643 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi09g00251 . 330 643 Strubbelig Receptor Gene Family AT4G22130 65.5 7.6e-117 418.7
Bhi05g01832 . 478 773 Strubbelig Receptor Gene Family AT4G22130 62.3 8.4e-108 388.7
Bhi04g01996 . 367 701 Strubbelig Receptor Gene Family AT4G22130 53.9 1.4e-99 361.3
Bhi03g00471 . 464 750 Strubbelig Receptor Gene Family AT4G22130 59.8 1.1e-96 351.7
Bhi03g00470 . 461 747 Strubbelig Receptor Gene Family AT4G22130 59.8 1.1e-96 351.7
Bhi03g00472 . 364 650 Strubbelig Receptor Gene Family AT4G22130 59.8 1.1e-96 351.7
Bhi11g02653 . 387 718 Strubbelig Receptor Gene Family AT4G22130 51.0 1.1e-94 345.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007627 1 3 1 0 1 0 2 0 0 1 1 0 1 1 1 1 0 2 1 0 1 1 1 1 1 1 1 0 1 0 25
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87530 PF07714 PK_Tyr_Ser-Thr 2.50E-37 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi03g00472 Bhi_Chr03 FPKM 95.056808 107.381523 100.949409 98.99437 77.898117 62.19783 74.374359 117.184517 126.013535 115.255127