Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00518 TAAAAATGTGATGAGTCTGACTGCAATTCTTAGTGGTCTTGCGCCAAACATTTCATTGAAACTTCTCCAATTGTGCTAAAACGAATACTAATCTTCACCTAAAAGGCTTTGTATTGGTTGTTTGTATCAAACCCTTTTCTCTCAAGTCAGAGAATATTAGCAATACGCCGCCATTGAAGGTTTTTTCTTTGATTTTTATATGTTAACTTGTTTGTTTCTTCTTCTTCCTCTTCTTCATCATCTCCTCCGACCAGCCAGTATTTCTGTTTAGAGACATCTCGATATGGGTAGTAACTGCAGAAAGGTTGTTGGGTTTCTTCAATTCTTCCTCATTTCAATCTTCCTCTGTTTTTCCCCTCTGTTTTGCGACGCTGCAGATACAATTACAAGAGGTAGAGGTTTAAGAGACGACACTAACGAAACCCTCATATCCCTGAATGAATCCTACGAACTGGGATTCTTCAGCCCCATAAATTCTTCATCACGATACGTCGGAATATGGTATCACAAGATCAAAGAACACTCTGTTATTTGGGTTGCGAATAGAGATAGGCCACTTCGTAATAGAGATGGGGTTTTGATGATCGGAGATGACGGGAACTTGGTCGTTCTGGACGGCAACAACGTCTCTGTTTGGACAAGCAACATCACAGCGAATGCGTTGGATCCCAGAAACTTAACTCTTCATAACAATGGAGAATTGGTTCTTTCTAGCGGAGAAGACTCGTCGAAAGTTCATTGGAGTAGCTTCGAACATCCCACAGACACATTTCTTCCGAATATGGTGGTGAGAGTGAACAGAGAAATGGGTGAGAAACGAATGTTTATGTCGTGGAAATCAGAGACAGATCCGGCCGTCGGAAATTACTGTCTGGGTGTGGATCCTCGTGGTGCTGTACAGATTATCATTTGGAATGGGAATGATCGATTGTGGAGAAGCGGCCACTGGGATAACCAGATTTTTTCTGGGATTCCAACCATGCGTTCTACGCCGTTGTACGGTTTCAAGATTACCCCTGGAAATAACGTAAGTGTAACTTTTGATGCACTGAATGATTCCGATAAGCTGAAATTTCAAATCAAGTGGGATGGTAAAGAAGCACAGCAACGATTGAATGAAGAAACCCTCAAATGGGAAACAATTCGTTTACTGCCTTCTAACGATTGCGATTTCTATAATTTTTGTGGGGATTTTGGGCTTTGTTCTGAAACGAGTCGTCCTAAGTGTAGCTGCCCTCAAGGGTTTATACCCAAAAACAAAGCAAGATGGGACAAAGGGTCTTGGTCAGATGGGTGTCAGAGGAAGACTCCATTGCTTGAGCAGAGAATGAACAGTAATTCAAATGGAACCATTGAAGATGGTGAACAAGATGGGTTTGTGGACGTACTATTTGTGAAATTGCCCGATTTCATAACTGGAATATTTGTGGTGGAATCGTGTAGAGATGTATGTTCGAACCGTTCTTCATGTGTTGCATATTCAGATGCTCCTGGAATTGGGTGTGCTACTTGGGATGCACCTTTAAAAGATATTCAGAAATTTGATGGTGCTGGGAATACTTTGCACCTTCGTCTCGCTCATTCTGATTTGAATAGCGAGAGCAAATTATCAACCGGTGTGATAATATTGATATGTTTAGGAGGAGCAGCTGCCATAGCCATATTAGCATTTCTGCTTTGGAAATTCGGAGGCAAAATGAAAGGTTCACCAGATGCTTCTTCCAGTCAACCTCAGAACAAAACTGAATTATCAATGTTTGACCTGAGTAAGAGCAAAGAACTTTCAGCAGAGCTTTCAGGGCCATACGAATTAGGCATAGAAGGTGAACAATTGAGTGGACCAGATTTGCCAATGTTCAGTTTCAACTGTATAGCTGTGGCTACTGATAACTTTTCTGAGGAAAACAAGCTTGGCCAGGGAGGCTTTGGCCCTGTGTACAAGGGAAAGCTTCCATGTGGACAAGAAATTGCTGTCAAGAGGCTTTCAGTCCGGTCTGGCCAAGGTTTAGAAGAGTTTAAGAATGAGATTATACTAATAGGAAAGTTACAGCATCGAAATCTCGTCAGACTGTTGGGATACTGCATTCAAGGAGAGGATAAGATGCTGCTTTATGAATATATGCCAAACAAAAGCTTGGATTGGTTTCTTTTTGATCCAAACAAGAAGGCACTACTAGATTGGAAAAAACGGTTGTCAATCATGGAGGGAGTCGCACGAGGGTTACTGTACCTTCATCGAGACTCGAGACTTCTTATTATTCATAGAGATTTGAAAGCTAGCAACATTTTGCTAGATGAAGACATGAATCCAAAGATATCAGACTTTGGAATGGCTAGAATATTTGGTGGAAACCAAAACGAGGCGACGAATACAATTCGAGTTGTTGGCACATATGGTTACATGGCTCCGGAGTATGCAATGGAAGGTTTATTTTCAGTGAAATCAGATGTATATAGTTTTGGTGTATTATTATTGGAATTAATATGTGGTCGGAGGAACACTAGCTTTCGCTCAACTGAATACTTAACACTTATTAGTTATGCTTGGAAACTTTGGAATGAAGGAAGAGCGATTGAACTTCTCGACCCGTCTATCAGCGATTCATCCCCCGAGAATGAAGTATTGAAATGCATACATGTGGCAATGTTGTGTGTTCAAGACTCTCCAGCATATAGACCAACATTGCAATCCTTGGTGCTAATGCTGGAGAGTGAATCCACATCTTTACCACAGCCAAGACAACCTACCTATACTTCAACGAGAGCCTCGATCGATACAGACTTGTTTACAGAAGGCCACGACATTGTATCGTCGAATGATGTAACAGTAACAATGTTGGATGGCAGATAGCGTTATCTTTTGGTTTTGATTCTTTCCTCCTAATGTTAATATACCATTTTGCTCATCTTCAAAGCATAGGCAGTTAGTTTGTGAAGCGAGTATAGTCATTTTTAGAAAGCTTGTTCATATGAATGATTGGTTTTGGTTGATTGTTTTGATAGGTAATTTAAAGCAAAAAGAATTGAAGTGGTTTGTTGGTTGATAGATTAGGTCTGTATTTTACTTTTAACTGCAAGATAGATCCATTAGTAACAAAGTATTTTATCTTGTTA 3114 40.43 MGSNCRKVVGFLQFFLISIFLCFSPLFCDAADTITRGRGLRDDTNETLISLNESYELGFFSPINSSSRYVGIWYHKIKEHSVIWVANRDRPLRNRDGVLMIGDDGNLVVLDGNNVSVWTSNITANALDPRNLTLHNNGELVLSSGEDSSKVHWSSFEHPTDTFLPNMVVRVNREMGEKRMFMSWKSETDPAVGNYCLGVDPRGAVQIIIWNGNDRLWRSGHWDNQIFSGIPTMRSTPLYGFKITPGNNVSVTFDALNDSDKLKFQIKWDGKEAQQRLNEETLKWETIRLLPSNDCDFYNFCGDFGLCSETSRPKCSCPQGFIPKNKARWDKGSWSDGCQRKTPLLEQRMNSNSNGTIEDGEQDGFVDVLFVKLPDFITGIFVVESCRDVCSNRSSCVAYSDAPGIGCATWDAPLKDIQKFDGAGNTLHLRLAHSDLNSESKLSTGVIILICLGGAAAIAILAFLLWKFGGKMKGSPDASSSQPQNKTELSMFDLSKSKELSAELSGPYELGIEGEQLSGPDLPMFSFNCIAVATDNFSEENKLGQGGFGPVYKGKLPCGQEIAVKRLSVRSGQGLEEFKNEIILIGKLQHRNLVRLLGYCIQGEDKMLLYEYMPNKSLDWFLFDPNKKALLDWKKRLSIMEGVARGLLYLHRDSRLLIIHRDLKASNILLDEDMNPKISDFGMARIFGGNQNEATNTIRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLELICGRRNTSFRSTEYLTLISYAWKLWNEGRAIELLDPSISDSSPENEVLKCIHVAMLCVQDSPAYRPTLQSLVLMLESESTSLPQPRQPTYTSTRASIDTDLFTEGHDIVSSNDVTVTMLDGR 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10011915 10015810 + XM_039026735.1 Bhi03g00518 29295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00518 855 Gene3D - 27 156 IPR036426 -
Bhi03g00518 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Bhi03g00518 855 SUPERFAMILY Protein kinase-like (PK-like) 522 832 IPR011009 -
Bhi03g00518 855 Pfam D-mannose binding lectin 82 185 IPR001480 -
Bhi03g00518 855 SMART serkin_6 537 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00518 855 CDD PAN_AP_plant 358 432 - -
Bhi03g00518 855 Pfam Protein tyrosine and serine/threonine kinase 540 806 IPR001245 GO:0004672|GO:0006468
Bhi03g00518 855 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 223 IPR036426 -
Bhi03g00518 855 SMART blect_4 39 159 IPR001480 -
Bhi03g00518 855 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544
Bhi03g00518 855 CDD STKc_IRAK 543 809 - -
Bhi03g00518 855 Gene3D Transferase(Phosphotransferase) domain 1 613 826 - -
Bhi03g00518 855 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 11 855 - -
Bhi03g00518 855 Pfam PAN-like domain 361 416 IPR003609 -
Bhi03g00518 855 CDD B_lectin 44 159 IPR001480 -
Bhi03g00518 855 Gene3D Phosphorylase Kinase; domain 1 512 612 - -
Bhi03g00518 855 Pfam Domain of unknown function (DUF3403) 810 855 IPR021820 GO:0004674
Bhi03g00518 855 PIRSF SRK 4 855 IPR024171 GO:0004674
Bhi03g00518 855 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 855 - -
Bhi03g00518 855 ProSiteProfiles Protein kinase domain profile. 537 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00518 855 ProSiteProfiles Bulb-type lectin domain profile. 33 155 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00518 Bhi-Chr3:10011915 Bhi08g01864 Bhi-Chr8:53760583 0 dispersed
Bhi03g00518 Bhi-Chr3:10011915 Bhi03g00519 Bhi-Chr3:10011917 0 tandem
Bhi03g00518 Bhi-Chr3:10011915 Bhi08g01724 Bhi-Chr8:48657823 0 wgd
Bhi03g00518 Bhi-Chr3:10011915 Bhi08g01876 Bhi-Chr8:54115227 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87531 PF07714 PK_Tyr_Ser-Thr 1.10E-46 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00518 - - csv:101207147 1546.18