Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00533 ATGGCATTCTTTCTTCCTCTTGTATTGTTTTTCTTTGCCAGAGTTTGCGCCATCCAACCAGTCTTCGTCAAACATTACTGCTTGTACGATAGAGGGAACTTTGCCAGCAACAGCACGTATAAGGCCAACCTCAATCATGTCCTCTCCTCCATTGCCAATGCCAAAGATACTGGCAGTGGCTTTTACACTTCTTCCTATGGGGAAAACTCAGACAAAGCCAGTGCTATTGGCCTCTGCCGAGGCGATGTGAAGTCTGATGTATGTCGAAGCTGCCTCAATGACTCTATATATCTTCTCACACAGCTATGTCCTCGGCAGAAAGAAGCAATTGGGTGGTTTAATAACTGCATGCTGCGCTATTCAAGCCGTTCCATATTTGGTGCAGTGGAAACTGGACCCCATTTCCTCTCGTGGGCGGCAATCAATATAACAGAGGAAGCTCTGTTCAGCCAGAAGTTAAAAACGTTGCTAGATAGCTTGAAGAACAATACCTCTTCAGGTGGTTCTATAAAGAAGTATGCAACTGGAAACATAGGTGCACGCGGGTTATGGACTATATATGGGCTTTTGCAGTGCACACCTGACCTGTCGCAGCTACAATGTGATGAGTGCTTAAAGTCAGCGTTACAAGCATTCCCACCATGTTGTAGTGAAGGAACGACAGTTTTTTTACCTAGCTGTAACGCCAGATATGAACTGTACCTCTTCTATGACCCTTCTGCCGAGTCACAACCACCACTGTCGGTAGTATTTTCTCCTTCAACTAGTACCAAGTCTACAGAGGGAAAGAAGTTCAGAATACGAACTGTCATTGTGATAGTTCTTCCATTTGTAGCACTTTCGCTGTTATTGACCATTGGCTTCTATATCTTTTTGAGATCCAGAAAGTTGAGGGAAAGACTTGAAACTACTGATGATGATATTAACTCTATGGACTTCTTGCAATACGACTTTAAGACGATCAAAGATGCAACAGATGACTTCTCAACTGTCCATAAACTTGGACAAGGTGGATTTGGCATCGTTTATAAGGGTAAACTTCTCAATGGACAAGAAGTGGCTGTAAAAAGGCTAACTCAAGGTTCTCAACAGGGAGACCTCGAATTTAAGAATGAAGTTTTATTGGTTGCTAAGCTGCAGCACCGGAATCTGGTTCGACTTCTTGGCTTTTGTTTTGAGAAAAGTGAAAGACTCCTAATCTACGAGTTTCTACCTAATTCAAGCTTAGATCGTTTTATATTTGATCCAATGCAGCGCCAATATTTGGACTGGCCAAGACATTACAAAATCATAGTAGGCATCAGTCGTGGTCTCATGTATCTTCATGAAGATTCTCGATTCAAAGTCATCCATCATGATCTTAAAGCTAGTAATATATTACTAGATGCAGAACTAAATCCAAAAATTAATGATTTTGGAATGGCAAGATTGTGTTCGTTCGATCAATCCAATGGTGATACAAGTAAAATTAAAGGAACATATGGATACATGGCCCCAGAGTATGCATTGTATGGGCATTTCTCAATAAAATTAGACGTTTTTAGTTTTGGTGTGTTTCTTCTAGAGATCGTGAGTGGCCAAAAGAACGGTAGCTTTCAAAATGGCGAAAATATAGAGCATCTTTTGAGCTATACATGGGAAAACTGGACGAAAGGAACAATTACAAATATCATAGACCCAATATTGACTGGAACTTGCATTGATGAAATCATAAGATGCATTCATCTAGGGTTATTATGTGTTCAAGAAGATGCAGCTAGCAGACCAACCATGGCTTTAGTTCTTCTCATGCTGAATAGTTACTCCTCTCTTCCTGTACCATCACGGCCTGGATTTTTGCTGCAAAGTAAATCATCAAACATTGCACAGCAATTTAATTGCACAGAAGGGTCCCAATCTAGCCTAGCTTCGAGCATTTGTATTGAAGAAGAATCATCAAACCAGTTTAACTCAATTTCTTGAGACTTGGAATGAGGAAACAACCTCAACTTAACATTTGTGTAAACAGGCAATACTGTTCTTATTTTCATCTGCATAAATCTTTAGTCCATGTCCATGTATATTAACAGAATAAAACCGAAC 2082 40.3 MAFFLPLVLFFFARVCAIQPVFVKHYCLYDRGNFASNSTYKANLNHVLSSIANAKDTGSGFYTSSYGENSDKASAIGLCRGDVKSDVCRSCLNDSIYLLTQLCPRQKEAIGWFNNCMLRYSSRSIFGAVETGPHFLSWAAINITEEALFSQKLKTLLDSLKNNTSSGGSIKKYATGNIGARGLWTIYGLLQCTPDLSQLQCDECLKSALQAFPPCCSEGTTVFLPSCNARYELYLFYDPSAESQPPLSVVFSPSTSTKSTEGKKFRIRTVIVIVLPFVALSLLLTIGFYIFLRSRKLRERLETTDDDINSMDFLQYDFKTIKDATDDFSTVHKLGQGGFGIVYKGKLLNGQEVAVKRLTQGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFEKSERLLIYEFLPNSSLDRFIFDPMQRQYLDWPRHYKIIVGISRGLMYLHEDSRFKVIHHDLKASNILLDAELNPKINDFGMARLCSFDQSNGDTSKIKGTYGYMAPEYALYGHFSIKLDVFSFGVFLLEIVSGQKNGSFQNGENIEHLLSYTWENWTKGTITNIIDPILTGTCIDEIIRCIHLGLLCVQEDAASRPTMALVLLMLNSYSSLPVPSRPGFLLQSKSSNIAQQFNCTEGSQSSLASSICIEEESSNQFNSIS 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10223360 10226180 - XM_039027308.1 Bhi03g00533 29310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00533 653 CDD STKc_IRAK 334 599 - -
Bhi03g00533 653 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 635 - -
Bhi03g00533 653 SMART serkin_6 328 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00533 653 Gene3D Phosphorylase Kinase; domain 1 303 403 - -
Bhi03g00533 653 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Bhi03g00533 653 Pfam Protein tyrosine and serine/threonine kinase 330 541 IPR001245 GO:0004672|GO:0006468
Bhi03g00533 653 ProSiteProfiles Gnk2-homologous domain profile. 131 236 IPR002902 -
Bhi03g00533 653 Pfam Salt stress response/antifungal 144 234 IPR002902 -
Bhi03g00533 653 Pfam Salt stress response/antifungal 32 122 IPR002902 -
Bhi03g00533 653 Gene3D - 21 124 IPR038408 -
Bhi03g00533 653 Gene3D - 134 236 IPR038408 -
Bhi03g00533 653 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 635 - -
Bhi03g00533 653 Gene3D Transferase(Phosphotransferase) domain 1 404 605 - -
Bhi03g00533 653 ProSiteProfiles Protein kinase domain profile. 328 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00533 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Bhi03g00533 653 ProSiteProfiles Gnk2-homologous domain profile. 22 125 IPR002902 -
Bhi03g00533 653 SUPERFAMILY Protein kinase-like (PK-like) 307 598 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00533 Bhi08g01768 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00530 Bhi-Chr3:10206452 Bhi03g00533 Bhi-Chr3:10223360 3.15E-81 dispersed
Bhi03g00533 Bhi-Chr3:10223360 Bhi03g00540 Bhi-Chr3:10578477 0 dispersed
Bhi03g00532 Bhi-Chr3:10218803 Bhi03g00533 Bhi-Chr3:10223360 0 tandem
Bhi03g00533 Bhi-Chr3:10223360 Bhi03g00534 Bhi-Chr3:10275785 8.52E-147 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87534 PF07714 PK_Tyr_Ser-Thr 2.20E-42 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00533 - - csv:105436038 1069.68