Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi03g00540 TTGACATGGGGCGGCGGCATTTCGTAATTTAGACCATTGATTCACATGAAAGACGAAATGGGATTGAGAGGCATTTAGTTCCTTCTAGCAGATAGGTTTCTGTGAAAAAAAACTTTGTTTACACACCGAAAAAACAAAAAACAAAGAGATGGGAAATCCAAAAAACCTTCTCTTGCTTTGCTTCATTCTCATATTCATGGTTTCAACCACCATTTCTCAAATAGAAATCAAGACCCACTTATGTTCAAACAGCGGCAACTACACTAGCAACAGCATTTACAAGCAAAATCTCGACGCCCTCCTTTCCTCCATCGCCTCCAACACCGAAATCGATTACGGGTTCTACAATTTCTCTGCCGGACAGCAACCCGACAAGGTGAACGCCATCGCCCTTTGCCTGGCCGATCTGACGGTGGAGAAATGCAGGAGCTGTATTCAAAATTCAACTCGAAGGATTCTAGAGGATTGTCCCAACCAAAAGGAAGCTGTCGGATGGTACACCGATTGCATGATTCGTTACTCAAATACATCAATATTTGGCGTTGGGAGCGAACAAGTGCTTAGCCCAACTTTTGTTTCCGGTCGGACTGCATCAGACGTAGTTGGGTACACTCAATCACTCAGCAGTTTGTTGCAAAGACTGAGAAGTGAAGCTGCGTCTGGGGATTCTAGACGCAAATTTGCTGCGGGGAAAATTGCAGCCCCAAATTTGGATACCATATTTGGGTTTCTTCAATGTACTCCCGATTTGTCCTCTATGGATTGCGAGAATTGTCTTCTGAAGACCGCTGAAAGAGTTCCGAATGGAAGTACAGGAACCAGGATATTTTCGACCAGCTGTTTCTTGAGATATGAGACTAACGATCTTTTCTACAACACTCTGTCGCCGCCTCCCTCTGCTGGTGACGCTCCTCCCCCACCCATGTCGCCACCGCCACCGCCAGGAAATACTTCTAGAACTGTCATTATCGTTGTCCTGTCCATCGTTCCAGCCATCATTGTCGTTGTTGCCACTTTTNTTCATTTGAGGTTGAGGAAGCGAAAAAACAGAAAATCAACAGACAAATTTGAAGGTGTTGCTATTGGGGATACCACTGACGAAATTAGCAGTGTGGAGACACTTCAATTTGATTTCGAAACTATTAAAGTTGCAACAAACAACTTCTCAAGTGAAAACAAGCTCGGACAGGGTGGATTTGGAGCTGTTTACAAGGGTAAGCTAGCTAATGGACAACCTATAGCAGTGAAGAGGCTTGCAAGTAATTCACAACAAGGAGATGTTGAATTCAAAAATGAAGTCCTTTTGGTGGTCAAGCTTCAACATCGAAACTTGGTTAGGCTGTTGGGATTTTGCTTGCAAAGAACTGAAAAGCTTCTCGTATATGAGTTTGTACCAAATGCCAGTCTTGACCAATTCATATTTGATTTTGGAAAAAGGACACAATTAGACTGGGTAAGACGGTTCAAAATCATTAATGGCATTGCACGAGGACTTCTTTACCTTCATGAAGATTCTCGCCTTCGAATCATTCATCGTGATCTCAAAGCTAGTAATATTTTGTTGGATGAGGAAATGAACCCAAAGATTGCTGATTTTGGTATGGCAAGATTGTTTGAAGTAGATGAAACTCAAGGCAATACAAGTAGAATTGTGGGAACATATGGCTATATGGCTCCAGAATATTTAATGCATGGCCAGTTTTCAGTTAAATCGGATGTCTTTAGCTTAGGTGTTTTAATTCTTGAAATCGTGAGTGGTAAGAAAAATAGTTGCTTTCGCAATAGAGAAAAGATAGAAGATCTCTCCAGCTTTGCATGGAAAAATTGGAAGGCTGGAACGACTAAAAACATCATAGATTCAACACTTAGTATTGGTTCAAACGTTGAAATGTTAAGATGCATTCATATTGGATTATTATGTGTTCAAGAGAATGTAGCAGATCGTCCGACGATGACTACCGTGGTTCTGATGCTTAGTAGCATGTCTCTCACTCTTCCTGTACCTTTGGAACCAGCATTCTTCATGCATAGTAAAATTGATGAATCCAGCACACAAGCAAGGACGAGTAATTGGTTGGAAATGAATGAGGGGGCTTGTCATTCTGAAAGCGTACCCGTCCAATCTTTATCCAATGAAGCTTCAATTACTGATGTCAATCCTCGCTAGATTTTCATCCACTTTTTGGTAAAATATGTTATTTTGAAACTTGTTTTGGGTAGACAAACCGTAGATTTAGTACTTGATTGGTTCATTACGATATATTTATTGTTGTATGGAGAAATATTAAGAGTTGTGATTCAGTTGGTTGCAGTTGTAGCCATTTTTCACCCTAAACCACGTGGACCATGTCAATGGATATATGTATATATATGTCTCTTCTTTTTCTTTGCCTTTAA 2397 40.84 MGNPKNLLLLCFILIFMVSTTISQIEIKTHLCSNSGNYTSNSIYKQNLDALLSSIASNTEIDYGFYNFSAGQQPDKVNAIALCLADLTVEKCRSCIQNSTRRILEDCPNQKEAVGWYTDCMIRYSNTSIFGVGSEQVLSPTFVSGRTASDVVGYTQSLSSLLQRLRSEAASGDSRRKFAAGKIAAPNLDTIFGFLQCTPDLSSMDCENCLLKTAERVPNGSTGTRIFSTSCFLRYETNDLFYNTLSPPPSAGDAPPPPMSPPPPPGNTSRTVIIVVLSIVPAIIVVVATFXHLRLRKRKNRKSTDKFEGVAIGDTTDEISSVETLQFDFETIKVATNNFSSENKLGQGGFGAVYKGKLANGQPIAVKRLASNSQQGDVEFKNEVLLVVKLQHRNLVRLLGFCLQRTEKLLVYEFVPNASLDQFIFDFGKRTQLDWVRRFKIINGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFEVDETQGNTSRIVGTYGYMAPEYLMHGQFSVKSDVFSLGVLILEIVSGKKNSCFRNREKIEDLSSFAWKNWKAGTTKNIIDSTLSIGSNVEMLRCIHIGLLCVQENVADRPTMTTVVLMLSSMSLTLPVPLEPAFFMHSKIDESSTQARTSNWLEMNEGACHSESVPVQSLSNEASITDVNPR 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10578477 10581522 - XM_039026803.1 Bhi03g00540 29317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi03g00540 672 Pfam Protein kinase domain 340 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00540 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Bhi03g00540 672 Gene3D Transferase(Phosphotransferase) domain 1 415 616 - -
Bhi03g00540 672 MobiDBLite consensus disorder prediction 249 267 - -
Bhi03g00540 672 CDD STKc_IRAK 345 612 - -
Bhi03g00540 672 ProSiteProfiles Protein kinase domain profile. 339 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00540 672 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 635 - -
Bhi03g00540 672 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Bhi03g00540 672 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Bhi03g00540 672 Gene3D Phosphorylase Kinase; domain 1 304 414 - -
Bhi03g00540 672 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Bhi03g00540 672 MobiDBLite consensus disorder prediction 244 267 - -
Bhi03g00540 672 SMART serkin_6 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi03g00540 672 ProSiteProfiles Gnk2-homologous domain profile. 136 240 IPR002902 -
Bhi03g00540 672 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 635 - -
Bhi03g00540 672 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Bhi03g00540 672 Pfam Salt stress response/antifungal 152 237 IPR002902 -
Bhi03g00540 672 Gene3D - 137 239 IPR038408 -
Bhi03g00540 672 Gene3D - 24 128 IPR038408 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00532 Bhi-Chr3:10218803 Bhi03g00540 Bhi-Chr3:10578477 0 dispersed
Bhi03g00533 Bhi-Chr3:10223360 Bhi03g00540 Bhi-Chr3:10578477 0 dispersed
Bhi03g00536 Bhi-Chr3:10409080 Bhi03g00540 Bhi-Chr3:10578477 2.04E-177 dispersed
Bhi03g00540 Bhi-Chr3:10578477 Bhi08g01762 Bhi-Chr8:50734433 0 dispersed
Bhi08g01756 Bhi-Chr8:50605107 Bhi03g00540 Bhi-Chr3:10578477 6.29E-51 dispersed
Bhi08g01768 Bhi-Chr8:50925407 Bhi03g00540 Bhi-Chr3:10578477 0 dispersed
Bhi03g00540 Bhi-Chr3:10578477 Bhi03g00545 Bhi-Chr3:10794876 0 proximal
Bhi03g00539 Bhi-Chr3:10501810 Bhi03g00540 Bhi-Chr3:10578477 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87540 PF00069 Pkinase 6.30E-47 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi03g00540 - - csv:116404634 1064.68